BAC Information

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BAC

Clone NameB6Ng01-055O09
Chromosome7 (Build37)
Map Location 15,025,295 - 15,026,472
singlet/doubletsinglet
Overlap gene2810007J24Rik
Upstream geneLOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256, LOC666267, LOC100042624, LOC100043194, Sult2a1, EG620627, EG434121, EG629203, LOC677512, EG629219, EG434123
Downstream geneEG638251, B430211C08Rik, EG194588, LOC666352, EG666312, LOC666365, LOC671978, LOC100042677, LOC100042685, EG666381, LOC100042691, LOC100042702, LOC100042707, LOC100042711, LOC100042714, LOC100042717, LOC100042721, LOC100042728, LOC100042731, LOC100042735, LOC100042739, LOC100042742, LOC235841, EG666407, LOC666337, Obox2, LOC100042753
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055O09.bB6Ng01-055O09.g
ACCDH878219DH878220
length1,1481,167
definitionDH878219|Mus musculus domesticus DNA, BAC clone: B6Ng01-055O09, 5' end.DH878220|Mus musculus domesticus DNA, BAC clone: B6Ng01-055O09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtcctattacctggtcagtttgaatgtttcataccacaggtac
atgcactctcaagtatctatttcactgccttatcacatttgatgtcttat
taggattacctcattaactgtcctgaatgacatagacaaaaaacacaaaa
atctggggaagacttgtgtagctgatatttgctatcttgatggttcttct
ttcattcatgcttttcctccccgtttcttccacatttcaatcttctatca
ctaatcaggaaagagaaaagaatagagagcaaaggtggctatgttatcat
ttgactatttcctgctgattaggctcatcgagttcctcaatgcaaattta
atattcaaccttagcgtatttaatttcttcttgatttttcttctctgcac
atgagtacttaacaacatgggataacattgaccaacaacaatgaatcaac
acccaacaacctacactaccttttgtggcattgatatatcctctaaaata
tccccagaattccaaaccatatattcatagacacaatctccatcttgcaa
tatcatgcctgtgaaagagagtgaagcaaatcacagtcaactgctgtgtg
caatctgaagcagcctcatattacatgaatgggattaaaatgaaaacatt
tttataatatttctctgtttttaaagaaaccaaaattccaaaattgtgac
taaatgcttgcatcaataccagaactgactagatagtagaatagttgcta
ctttaggaagttagccttgagcaatgacatatgtcatatcccaaacttac
gtcttttctatggtctaatttaaagtcttcagcgtatcataatttaaaga
attattttaattattcatttttactgttttgagagtgccctatatgatta
ttgcatttacctttttaaaatccctctctatttttcacttctactcatcc
tgtgtctcctgaatccctctcaaaatgtatacttctgagctgattataga
tatacagtatttagagtatgactaatgacggctttaataaaacaagaata
gatgatattaagagctacgtttttttttctagaaacgagagtaaatagag
aaggatgtatcagcatactgactcttatgagtacttgggtacgagatg
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatcgtactgccggaggatccagcaatacctctcctgggc
atatatccagaagatgctccaaatggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaggttggtaaggaatcagat
gtccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatgtgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctctttgtgagactatgccggggcctagcaaa
cacagagtggatgctcacagtcagctaatggatggatcatagggctccaa
tggaggagctagagaaagtagccaaggagctaaagggatctgcaccctat
agtggaacaacattatgaactaacagtacccggagctctgactcagctgc
atatatatcaaaagatggctagtcgggcatcctggaagaaaggccatgga
ctgcacctttatggccagtacaggaatccaaggccaaaaggggagtggtg
tggtcaggaatggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_15025295_15026472
seq2: B6Ng01-055O09.b_48_1195 (reverse)

seq1  CATCTCTGTACCCAAAAGTAACTCTATAGAGTCAGTAATGCTGAATACAA  50
      |||||| ||||||  |||| ||||   ||||||||| |||||| ||||| 
seq2  CATCTC-GTACCC--AAGT-ACTCATAAGAGTCAGT-ATGCTG-ATACA-  43

seq1  TTCCTTTTCCTCTATTTTACCTCTCTGTTTTCTTAGAAAAAAAAACGTAG  100
       |||||   ||||||||     ||||  |||| |||||||||||||||||
seq2  -TCCTT---CTCTATTT----ACTCTCGTTTC-TAGAAAAAAAAACGTAG  84

seq1  CTCTTTAATATTCATCTATTTCTTTGTTTTATTAAAGCCCTTCATTTAGG  150
      ||| |||||| |||||||||   |||||||||||||| || |||||   |
seq2  CTC-TTAATA-TCATCTATT--CTTGTTTTATTAAAG-CCGTCATT--AG  127

seq1  TCATTACTCTTAAATACTTGTATATCTTATAATCAGCTCAGAAGTTATAC  200
      ||| ||||| ||||||| |||||||| ||||||||||||||||| |||||
seq2  TCA-TACTC-TAAATAC-TGTATATC-TATAATCAGCTCAGAAG-TATAC  172

seq1  ATTTTTTGAGAGGGATTCAGGAGACACAGGATGAGTAGAAGTGAAAAATA  250
      |  |||||||||||||||||||||||||||||||||||||||||||||||
seq2  A--TTTTGAGAGGGATTCAGGAGACACAGGATGAGTAGAAGTGAAAAATA  220

seq1  GAGAGGGATTTTAAAAAGGTAAATGCAATAATCATATAGGGCACTCTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGATTTTAAAAAGGTAAATGCAATAATCATATAGGGCACTCTCAA  270

seq1  AACAGTAAAAATGAATAATTAAAATAATTCTTTAAATTATGATACGCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTAAAAATGAATAATTAAAATAATTCTTTAAATTATGATACGCTGA  320

seq1  AGACTTTAAATTAGACCATAGAAAAGACGTAAGTTTGGGATATGACATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTAAATTAGACCATAGAAAAGACGTAAGTTTGGGATATGACATAT  370

seq1  GTCATTGCTCAAGGCTAACTTCCTAAAGTAGCAACTATTCTACTATCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGCTCAAGGCTAACTTCCTAAAGTAGCAACTATTCTACTATCTAG  420

seq1  TCAGTTCTGGTATTGATGCAAGCATTTAGTCACAATTTTGGAATTTTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCTGGTATTGATGCAAGCATTTAGTCACAATTTTGGAATTTTGGT  470

seq1  TTCTTTAAAAACAGAGAAATATTATAAAAATGTTTTCATTTTAATCCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAAAAACAGAGAAATATTATAAAAATGTTTTCATTTTAATCCCAT  520

seq1  TCATGTAATATGAGGCTGCTTCAGATTGCACACAGCAGTTGACTGTGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTAATATGAGGCTGCTTCAGATTGCACACAGCAGTTGACTGTGATT  570

seq1  TGCTTCACTCTCTTTCACAGGCATGATATTGCAAGATGGAGATTGTGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCACTCTCTTTCACAGGCATGATATTGCAAGATGGAGATTGTGTCT  620

seq1  ATGAATATATGGTTTGGAATTCTGGGGATATTTTAGAGGATATATCAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATATGGTTTGGAATTCTGGGGATATTTTAGAGGATATATCAATG  670

seq1  CCACAAAAGGTAGTGTAGGTTGTTGGGTGTTGATTCATTGTTGTTGGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAAAGGTAGTGTAGGTTGTTGGGTGTTGATTCATTGTTGTTGGTCA  720

seq1  ATGTTATCCCATGTTGTTAAGTACTCATGTGCAGAGAAGAAAAATCAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATCCCATGTTGTTAAGTACTCATGTGCAGAGAAGAAAAATCAAGA  770

seq1  AGAAATTAAATACGCTAAGGTTGAATATTAAATTTGCATTGAGGAACTCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTAAATACGCTAAGGTTGAATATTAAATTTGCATTGAGGAACTCG  820

seq1  ATGAGCCTAATCAGCAGGAAATAGTCAAATGATAACATAGCCACCTTTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCCTAATCAGCAGGAAATAGTCAAATGATAACATAGCCACCTTTGC  870

seq1  TCTCTATTCTTTTCTCTTTCCTGATTAGTGATAGAAGATTGAAATGTGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATTCTTTTCTCTTTCCTGATTAGTGATAGAAGATTGAAATGTGGA  920

seq1  AGAAACGGGGAGGAAAAGCATGAATGAAAGAAGAACCATCAAGATAGCAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACGGGGAGGAAAAGCATGAATGAAAGAAGAACCATCAAGATAGCAA  970

seq1  ATATCAGCTACACAAGTCTTCCCCAGATTTTTGTGTTTTTTGTCTATGTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAGCTACACAAGTCTTCCCCAGATTTTTGTGTTTTTTGTCTATGTC  1020

seq1  ATTCAGGACAGTTAATGAGGTAATCCTAATAAGACATCAAATGTGATAAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGACAGTTAATGAGGTAATCCTAATAAGACATCAAATGTGATAAG  1070

seq1  GCAGTGAAATAGATACTTGAGAGTGCATGTACCTGTGGTATGAAACATTC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGAAATAGATACTTGAGAGTGCATGTACCTGTGGTATGAAACATTC  1120

seq1  AAACTGACCAGGTAATAGGACAGAATTC  1178
      ||||||||||||||||||||||||||||
seq2  AAACTGACCAGGTAATAGGACAGAATTC  1148