BAC Information

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BAC

Clone NameB6Ng01-056C07
Chromosome7 (Build37)
Map Location 65,723,574 - 65,836,284
singlet/doubletdoublet
Overlap genenone
Upstream geneGabra5, Gabrb3, EG668807, LOC434189
Downstream geneAtp10a, LOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a, LOC100040985, LOC100041010
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056C07.bB6Ng01-056C07.g
ACCDH878396DH878397
length1,008427
definitionDH878396|Mus musculus domesticus DNA, BAC clone: B6Ng01-056C07, 5' end.DH878397|Mus musculus domesticus DNA, BAC clone: B6Ng01-056C07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,723,574 - 65,724,551)(65,835,852 - 65,836,284)
sequence
gaattcattccagagtttatatgaatgtgatttctttgaaaacactttca
ataattcttttcaaatctttgcctgggttctagtgtaatccaatctcatt
ggtatcattactgtgggtgtagtaattttggaagcagtcctgctgccttc
atttgtcagtttcttgtggttttgcattgggagttgtgcttctgggatta
ggttattggctgaaaattttaaattccctttattctttcataggaagtgc
ttgcaatattcaaaaggaattaggttggttatagagttaggtttgaagta
taaagactaaatgtagtctcacctaacttctggttgcacttcaactctta
gggtgtactttttctgggtgttcaaatacctgtcactcctgagctatcct
ttgcaggaaaagaccacagatgctggtcctgtcagtgggtgttccttcag
aaatcaatcatatattccaagttacacctctgagaaggagttggaggtgc
ctggtatcccttggcttaatgttgatcaaaagaatttaaggttcatggaa
attgcattctctggttatttccccagtttcagaatggataattgggatag
atattcttagaattgggagaattcccacactgttttttttacctatatgg
tgaaagttatttgattggaaaggctaaactgatacaattggcgttgcctc
taccagcaaaatatagtgaacataaaccagtactgcattccaggagaatt
aaagaaattagtaccatcatccatgacttgaaaaatgcatggatagtggt
tcccccctatttttgccaaagcagaagacagatggaccatggagaatcag
ttgactatagaaaccttaatcaaatttaactccaattgcagctggtgaac
agatgtgcatccttacttgagcatattaacaatctgctagcacatggtat
gcagccagtgccattttctttgtaccactcataaagatcacctaaatcaa
tttgcttt
tctaactctcctggcccttctctggagcctcaagggtctcatgtgagcaa
tggaactaggactgggacccagtcctccctgtcttgctacctgcagagag
gagccctagaaaactcagtccaggacatgacagttcccttctgcagcagg
ctatttcaatattcaggatgtgtttcccctactttggataggtgcagagt
gtgtgggtatgggacagggtctgtgtgatacactactctacttcaaaatc
ccaagtcccattgtcgtatgtattcccaaacattttctgtgctctcttgt
atggatttccttcttgggagcattaaggattctgagcatccttgggtgtg
actgttagaactagaaggttcctaatgtccctgtcctataagaagagaat
ttgtgtgtgtatggtagggaggggcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_65723574_65724551
seq2: B6Ng01-056C07.b_50_1025

seq1  GAATTCATTCCAGAGTTTATATGAATGTGATTTCTTTGAAAACACTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCCAGAGTTTATATGAATGTGATTTCTTTGAAAACACTTTCA  50

seq1  ATAATTCTTTTCAAATCTTTGCCTGGGTTCTAGTGTAATCCAATCTCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCTTTTCAAATCTTTGCCTGGGTTCTAGTGTAATCCAATCTCATT  100

seq1  GGTATCATTACTGTGGGTGTAGTAATTTTGGAAGCAGTCCTGCTGCCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCATTACTGTGGGTGTAGTAATTTTGGAAGCAGTCCTGCTGCCTTC  150

seq1  ATTTGTCAGTTTCTTGTGGTTTTGCATTGGGAGTTGTGCTTCTGGGATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCAGTTTCTTGTGGTTTTGCATTGGGAGTTGTGCTTCTGGGATTA  200

seq1  GGTTATTGGCTGAAAATTTTAAATTCCCTTTATTCTTTCATAGGAAGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTGGCTGAAAATTTTAAATTCCCTTTATTCTTTCATAGGAAGTGC  250

seq1  TTGCAATATTCAAAAGGAATTAGGTTGGTTATAGAGTTAGGTTTGAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAATATTCAAAAGGAATTAGGTTGGTTATAGAGTTAGGTTTGAAGTA  300

seq1  TAAAGACTAAATGTAGTCTCACCTAACTTCTGGTTGCACTTCAACTCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACTAAATGTAGTCTCACCTAACTTCTGGTTGCACTTCAACTCTTA  350

seq1  GGGTGTACTTTTTCTGGGTGTTCAAATACCTGTCACTCCTGAGCTATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTACTTTTTCTGGGTGTTCAAATACCTGTCACTCCTGAGCTATCCT  400

seq1  TTGCAGGAAAAGACCACAGATGCTGGTCCTGTCAGTGGGTGTTCCTTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGGAAAAGACCACAGATGCTGGTCCTGTCAGTGGGTGTTCCTTCAG  450

seq1  AAATCAATCATATATTCCAAGTTACACCTCTGAGAAGGAGTTGGAGGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAATCATATATTCCAAGTTACACCTCTGAGAAGGAGTTGGAGGTGC  500

seq1  CTGGTATCCCTTGGCTTAATGTTGATCAAAAGAATTTAAGGTTCATGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTATCCCTTGGCTTAATGTTGATCAAAAGAATTTAAGGTTCATGGAA  550

seq1  ATTGCATTCTCTGGTTATTTCCCCAGTTTCAGAATGGATAATTGGGATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATTCTCTGGTTATTTCCCCAGTTTCAGAATGGATAATTGGGATAG  600

seq1  ATATTCTTAGAATTGGGAGAATTCCCACACTGTTTTTTTTACCTATATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTTAGAATTGGGAGAATTCCCACACTGTTTTTTTTACCTATATGG  650

seq1  TGAAAGTTATTTGATTGGAAAGGCTAAACTGATACAATTGGCGTTGCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTTATTTGATTGGAAAGGCTAAACTGATACAATTGGCGTTGCCTC  700

seq1  TACCAGCAAAATATAGTGAACATAAACCAGTACTGCATTCCAGGAGAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGCAAAATATAGTGAACATAAACCAGTACTGCATTCCAGGAGAATT  750

seq1  AAAGAAATTAGTACCATCATCCATGACTTGAAAAATGCATGGATAGTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATTAGTACCATCATCCATGACTTGAAAAATGCATGGATAGTGGT  800

seq1  TCCCCCCTATTTTTGCCAAAGCAGAAGACAGATGGACCATGGAGAATCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCTATTTTTGCCAAAGCAGAAGACAGATGGACCATGGAGAATCAG  850

seq1  TTGACTATAGAAACCTTAATCAAATTTTAACTCCAATTGCAGCTGGTGAA  900
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTGACTATAGAAACCTTAATCAAA-TTTAACTCCAATTGCAGCTGGTGAA  899

seq1  CCAGATGTGCATCCTTACTTGAGCATATTAACAATCTGCTAGCACATGGT  950
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CAGATGTGCATCCTTACTTGAGCATATTAACAATCTGCTAGCACATGGT  948

seq1  ATGCAGCCAGTGCCATTTTCTTTGTACC  978
      ||||||||||||||||||||||||||||
seq2  ATGCAGCCAGTGCCATTTTCTTTGTACC  976

seq1: chr7_65835852_65836284
seq2: B6Ng01-056C07.g_69_501 (reverse)

seq1  CTGCCCCTCCCTACCATACACACACAAATTCTCTTCTTATAGGACAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCTCCCTACCATACACACACAAATTCTCTTCTTATAGGACAGGGA  50

seq1  CATTAGGAACCTTCTAGTTCTAACAGTCACACCCAAGGATGCTCAGAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGAACCTTCTAGTTCTAACAGTCACACCCAAGGATGCTCAGAATC  100

seq1  CTTAATGCTCCCAAGAAGGAAATCCATACAAGAGAGCACAGAAAATGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGCTCCCAAGAAGGAAATCCATACAAGAGAGCACAGAAAATGTTT  150

seq1  GGGAATACATACGACAATGGGACTTGGGATTTTGAAGTAGAGTAGTGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATACATACGACAATGGGACTTGGGATTTTGAAGTAGAGTAGTGTAT  200

seq1  CACACAGACCCTGTCCCATACCCACACACTCTGCACCTATCCAAAGTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGACCCTGTCCCATACCCACACACTCTGCACCTATCCAAAGTAGG  250

seq1  GGAAACACATCCTGAATATTGAAATAGCCTGCTGCAGAAGGGAACTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACACATCCTGAATATTGAAATAGCCTGCTGCAGAAGGGAACTGTCA  300

seq1  TGTCCTGGACTGAGTTTTCTAGGGCTCCTCTCTGCAGGTAGCAAGACAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGGACTGAGTTTTCTAGGGCTCCTCTCTGCAGGTAGCAAGACAGG  350

seq1  GAGGACTGGGTCCCAGTCCTAGTTCCATTGCTCACATGAGACCCTTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACTGGGTCCCAGTCCTAGTTCCATTGCTCACATGAGACCCTTGAGG  400

seq1  CTCCAGAGAAGGGCCAGGAGAGTTAGAGAATTC  433
      |||||||||||||||||||||||||||||||||
seq2  CTCCAGAGAAGGGCCAGGAGAGTTAGAGAATTC  433