BAC Information

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BAC

Clone NameB6Ng01-056D22
Chromosome7 (Build37)
Map Location 78,434,634 - 78,546,448
singlet/doubletdoublet
Overlap genenone
Upstream geneNr2f2, LOC100042833, B130024G19Rik, LOC100042838, LOC665486, LOC100041957
Downstream geneLOC665535, Mctp2, LOC100042873
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056D22.bB6Ng01-056D22.g
ACCDH878468DH878469
length1,0921,041
definitionDH878468|Mus musculus domesticus DNA, BAC clone: B6Ng01-056D22, 5' end.DH878469|Mus musculus domesticus DNA, BAC clone: B6Ng01-056D22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,434,634 - 78,435,730)(78,545,406 - 78,546,448)
sequence
gaattccaattttagagtttgatacaacaataacagtgaatggaagaaac
acaggaaagcagatatgtgtaagatcatccacagccagaaatgtttatct
agaaacacggggctctagtgagatatctatcattgcctcctttcctagat
ttcagcttggcagaatagccttatctgttgtctaagagtcgtgcaacctt
attttggaaaggtctccccagtcacacgtaccttatactggagaggaagg
cagttgattacatatttttttaaactgaaagaatttttggagaacaatgc
aaactgtatttatatcacagcctgcaaagattaagacaagtggatttgtc
accaacagtggtattgggattgcaattctctttgtttagagggaaacaca
cacatttattctttcagataaagcaacatacaaaagtaaggcctaattgc
tcacatacatgaactgcctgtccatggggattaagtagtgtgaattgaaa
tgagcatatatcggggaaaacatatcaagtatataaataccataaatgac
aatcactaccgaacttcagagtcacagcttatatgtatttaaagagcata
agcagtaatgtttgctgtttattttacaatctgagatgagaaagaataga
ttccatcaaagctgtgcttagtagcatccatccctcagttctaagttcca
aagttgctttctcatgaatagtcacccatcccaagtccagaaagttcttt
ctgatcagataaacaccattctctatgcttttatgaagaccctataaaac
aactgctcgaattataatatttaattactaagtaattctgggtcctttgg
gggtttacagaaaattgtttgaaattacaaagaattcccacatagccccg
cctgtttcttctattagtgcactacctgatgaaccaatattgataaattt
ataattctttaagttaatgtttatattaagggttcactgtgtactttata
atctatagagtctcacagatgctggtaagtatccatacttccatatcacg
tccatgattctgctgccctcactgctctctgatctcatcgat
gaattcatgagacaacaatttagactacatattaaaaaaatattccatct
gggaaacaacacctcaagggaagagggaaatctccctagacttgatacag
actacgttggataaaattccattgaagggggttgggacaggccaggaaaa
ctaagccaaaaggaaccagttcactctaacagatcatggtttttccatat
ctaatttctcagtttgtgactcttgtgggaatttttaaacccataaaatg
tgccctttctctgtccctggtaatggcctaatgaaataaacactcataaa
tatatggtgttcccagagataagatctgaacatcagaagccttttacctg
tcattgggtgatttattggcagtacattggtcatgtgatctcttccagtt
attcaccatgccccagcactgaaggtcggtcagttctcttgtcgatggat
tcttttaagtgttctaatgcctaagtgcctaatgattgaatgaacttcac
tttatatacacaacctaaaagtctacagaatggtcattggatttcatcgg
atgcttatgagtttcatctgaatctcttagaatctgccctaagacaggta
accctttgtaagaaaacttaggtgctctgaccctgcaggcagcaaaggta
gatccactttgtgcattccattgggtttaaattagatgaatgcctggatg
gacggatggagacatggatggatagatggatgggtgcatgcacgactctg
ttaccaatggagacattactaagacttgagtctataggagcagctggctt
gacttcagagctttctgaaatgagctcatggttgttttaccaataggaag
agacagtggttgctatccttttcgtccctcctttctcttcaagaggcaac
caggaaataggtcaggctttactctgctttctcttttcttgacttccagg
acttatctagcattaatgattctttaaacctgaaagcagccagtttcccg
tgacagttgaagcaggaacttcaccccccaccccactaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_78434634_78435730
seq2: B6Ng01-056D22.b_43_1134

seq1  GAATTCCAATTTTAGAGTTTGATACAACAATAACAGTGAATGGAAGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATTTTAGAGTTTGATACAACAATAACAGTGAATGGAAGAAAC  50

seq1  ACAGGAAAGCAGATATGTGTAAGATCATCCACAGCCAGAAATGTTTATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAAGCAGATATGTGTAAGATCATCCACAGCCAGAAATGTTTATCT  100

seq1  AGAAACACGGGGCTCTAGTGAGATATCTATCATTGCCTCCTTTCCTAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACACGGGGCTCTAGTGAGATATCTATCATTGCCTCCTTTCCTAGAT  150

seq1  TTCAGCTTGGCAGAATAGCCTTATCTGTTGTCTAAGAGTCGTGCAACCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTTGGCAGAATAGCCTTATCTGTTGTCTAAGAGTCGTGCAACCTT  200

seq1  ATTTTGGAAAGGTCTCCCCAGTCACACGTACCTTATACTGGAGAGGAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGAAAGGTCTCCCCAGTCACACGTACCTTATACTGGAGAGGAAGG  250

seq1  CAGTTGATTACATATTTTTTTAAACTGAAAGAATTTTTGGAGAACAATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGATTACATATTTTTTTAAACTGAAAGAATTTTTGGAGAACAATGC  300

seq1  AAACTGTATTTATATCACAGCCTGCAAAGATTAAGACAAGTGGATTTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTATTTATATCACAGCCTGCAAAGATTAAGACAAGTGGATTTGTC  350

seq1  ACCAACAGTGGTATTGGGATTGCAATTCTCTTTGTTTAGAGGGAAACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACAGTGGTATTGGGATTGCAATTCTCTTTGTTTAGAGGGAAACACA  400

seq1  CACATTTATTCTTTCAGATAAAGCAACATACAAAAGTAAGGCCTAATTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTATTCTTTCAGATAAAGCAACATACAAAAGTAAGGCCTAATTGC  450

seq1  TCACATACATGAACTGCCTGTCCATGGGGATTAAGTAGTGTGAATTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATACATGAACTGCCTGTCCATGGGGATTAAGTAGTGTGAATTGAAA  500

seq1  TGAGCATATATCGGGGAAAACATATCAAGTATATAAATACCATAAATGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCATATATCGGGGAAAACATATCAAGTATATAAATACCATAAATGAC  550

seq1  AATCACTACCGAACTTCAGAGTCACAGCTTATATGTATTTAAAGAGCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTACCGAACTTCAGAGTCACAGCTTATATGTATTTAAAGAGCATA  600

seq1  AGCAGTAATGTTTGCTGTTTATTTTACAATCTGAGATGAGAAAGAATAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTAATGTTTGCTGTTTATTTTACAATCTGAGATGAGAAAGAATAGA  650

seq1  TTCCATCAAAGCTGTGCTTAGTAGCATCCATCCCTCAGTTCTAAGTTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCAAAGCTGTGCTTAGTAGCATCCATCCCTCAGTTCTAAGTTCCA  700

seq1  AAGTTGCTTTCTCATGAATAGTCACCCATCCCAAGTCCAGAAAGTTCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGCTTTCTCATGAATAGTCACCCATCCCAAGTCCAGAAAGTTCTTT  750

seq1  CTGATCAGATAAACACCATTCTCTATGCTTTTATGAAGACCCTATAAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCAGATAAACACCATTCTCTATGCTTTTATGAAGACCCTATAAAAC  800

seq1  AACTGCTCGAATTATAATATTTAATTACTAAGTAATTCTGGGTCCTTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTCGAATTATAATATTTAATTACTAAGTAATTCTGGGTCCTTTGG  850

seq1  GGGTTTACAGAAAAATTGTTTGAAATTACAAAGAATTCCCACATAGCCCC  900
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTACAG-AAAATTGTTTGAAATTACAAAGAATTCCCACATAGCCCC  899

seq1  GCCTGTTTCTTCTATTAGTGCACTACCTGATGAACCAATATTGATAAATT  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCCTGTTTCTTCTATTAGTGCACTACCTGATGAACCAATATTGATAAA-T  948

seq1  TTATAATTCTTTAAGGTTAATGTTTATATT-AGGGTTCACTGTGTACTTT  999
      |||||||||||||| ||||||||||||||| |||||||||||||||||||
seq2  TTATAATTCTTTAA-GTTAATGTTTATATTAAGGGTTCACTGTGTACTTT  997

seq1  ATAATCTATAGAGTCTCACAGATGCTGGTAAGTATCCATTACTTCCATAT  1049
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATAATCTATAGAGTCTCACAGATGCTGGTAAGTATCCA-TACTTCCATAT  1046

seq1  CACGTCCAATGATTCTGCTGCCCTCACTGCTCTCTGATCTCCATCGAT  1097
      ||||||| |||||||||||||||||||||||||||||||| |||||||
seq2  CACGTCC-ATGATTCTGCTGCCCTCACTGCTCTCTGATCT-CATCGAT  1092

seq1: chr7_78545406_78546448
seq2: B6Ng01-056D22.g_67_1107 (reverse)

seq1  ACTTAGTGGGGTGTGGGGTGGAGTTCCTGGCCTCACTTGTCACGGGGAAC  50
      ||||||||||||| |||||| ||||||| || |||  ||||||||| |||
seq2  ACTTAGTGGGGTGGGGGGTGAAGTTCCT-GCTTCAACTGTCACGGGAAAC  49

seq1  TGGCTGCTTTTCAGGTTTAAAGAATCTATAATGCCTAGATAAGTCCTGGA  100
      ||||||| ||||||||||||||||||  ||||| ||||||||||||||||
seq2  TGGCTGC-TTTCAGGTTTAAAGAATCATTAATG-CTAGATAAGTCCTGGA  97

seq1  AGTCCAAGAAAAGAGAAAGCAGAGTAAAGCCTGACCTATTTCCTGGTTGC  150
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGT-CAAGAAAAGAGAAAGCAGAGTAAAGCCTGACCTATTTCCTGGTTGC  146

seq1  CTCTTGAAGAGAAAGGAGGGACGAAAAGGATAGCAACCACTGTCTCTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGAAGAGAAAGGAGGGACGAAAAGGATAGCAACCACTGTCTCTTCC  196

seq1  TATTGGTAAAAC-ACCATGAGCTCATTTCAG-AAGCTCTGAAGTCAAGCC  248
      |||||||||||| |||||||||||||||||| ||||||||||||||||||
seq2  TATTGGTAAAACAACCATGAGCTCATTTCAGAAAGCTCTGAAGTCAAGCC  246

seq1  AGCTGCTCCTATAGACTCAAGTCTTAGTAATGTCTCCATTGGTAACAGAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTCCTATAGACTCAAGTCTTAGTAATGTCTCCATTGGTAACAGAG  296

seq1  TCGTGCATGCACCCATCCATCTATCCATCCATGTCTCCATCCGTCCATCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGCATGCACCCATCCATCTATCCATCCATGTCTCCATCCGTCCATCC  346

seq1  AGGCATTCATCTAATTTAAACCCAATGGAATGCACAAAGTGGATCTACCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTCATCTAATTTAAACCCAATGGAATGCACAAAGTGGATCTACCT  396

seq1  TTGCTGCCTGCAGGGTCAGAGCACCTAAGTTTTCTTACAAAGGGTTACCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCCTGCAGGGTCAGAGCACCTAAGTTTTCTTACAAAGGGTTACCT  446

seq1  GTCTTAGGGCAGATTCTAAGAGATTCAGATGAAACTCATAAGCATCCGAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGGGCAGATTCTAAGAGATTCAGATGAAACTCATAAGCATCCGAT  496

seq1  GAAATCCAATGACCATTCTGTAGACTTTTAGGTTGTGTATATAAAGTGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCAATGACCATTCTGTAGACTTTTAGGTTGTGTATATAAAGTGAA  546

seq1  GTTCATTCAATCATTAGGCACTTAGGCATTAGAACACTTAAAAGAATCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTCAATCATTAGGCACTTAGGCATTAGAACACTTAAAAGAATCCA  596

seq1  TCGACAAGAGAACTGACCGACCTTCAGTGCTGGGGCATGGTGAATAACTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACAAGAGAACTGACCGACCTTCAGTGCTGGGGCATGGTGAATAACTG  646

seq1  GAAGAGATCACATGACCAATGTACTGCCAATAAATCACCCAATGACAGGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGATCACATGACCAATGTACTGCCAATAAATCACCCAATGACAGGT  696

seq1  AAAAGGCTTCTGATGTTCAGATCTTATCTCTGGGAACACCATATATTTAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCTTCTGATGTTCAGATCTTATCTCTGGGAACACCATATATTTAT  746

seq1  GAGTGTTTATTTCATTAGGCCATTACCAGGGACAGAGAAAGGGCACATTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTTTATTTCATTAGGCCATTACCAGGGACAGAGAAAGGGCACATTT  796

seq1  TATGGGTTTAAAAATTCCCACAAGAGTCACAAACTGAGAAATTAGATATG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGTTTAAAAATTCCCACAAGAGTCACAAACTGAGAAATTAGATATG  846

seq1  GAAAAACCATGATCTGTTAGAGTGAACTGGTTCCTTTTGGCTTAGTTTTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACCATGATCTGTTAGAGTGAACTGGTTCCTTTTGGCTTAGTTTTC  896

seq1  CTGGCCTGTCCCAACCCCCTTCAATGGAATTTTATCCAACGTAGTCTGTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTGTCCCAACCCCCTTCAATGGAATTTTATCCAACGTAGTCTGTA  946

seq1  TCAAGTCTAGGGAGATTTCCCTCTTCCCTTGAGGTGTTGTTTCCCAGATG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTCTAGGGAGATTTCCCTCTTCCCTTGAGGTGTTGTTTCCCAGATG  996

seq1  GAATATTTTTTTAATATGTAGTCTAAATTGTTGTCTCATGAATTC  1043
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTTTTTAATATGTAGTCTAAATTGTTGTCTCATGAATTC  1041