BAC Information

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BAC

Clone NameB6Ng01-056L10
Chromosome7 (Build37)
Map Location 9,090,147 - 9,090,895
singlet/doubletsinglet
Overlap geneLOC434110
Upstream geneLOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109
Downstream geneEG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056L10.bB6Ng01-056L10.g
ACCDH878788DH878789
length1,232953
definitionDH878788|Mus musculus domesticus DNA, BAC clone: B6Ng01-056L10, 5' end.DH878789|Mus musculus domesticus DNA, BAC clone: B6Ng01-056L10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccataactaaacatgataaaagcaatctacagcaaacca
gtagccaacatcacagtaaatgttgagaagcttgaagcaatcccactaaa
atcagggactagacaaggctgcccactttctgcctacctattcaacattg
tacttgaagtcctagccagagcaattccacaacaaaaggagatcgagcag
atacaaattggaaaggaagaagtcaaattatcactttttgcagatgatat
gataatatatataagtgacactaaaaattccaccagagaactcctaaacc
tgataaacagctttggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggcg
tgatcctaactaaggaagttaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaaaaaggaaagatctcccatg
ctcatggatgtgcaggatcaacattgtaaaaatggctctcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaagagcaatctgcaaattcatctggagtaacaaaaaacc
taggatagcaaaaactcttctcaaggataaaattacctctggtagaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaagactgca
tggtactggtatatcgacaaacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacaccgatggtcacttgatcttcagcaagggag
ctaaaacatccagtggaagaaagacagcattttcacaaatgtgtagcaca
actggtgtatcatgtagaagatgcaaatgttcattcttatctcctgtact
aagtcaatctagtgatcaggacttcaataaaaccaggagaaactgaactt
atactgagaaagtggggaaagcctcgagaattggcacaggaaaattctga
aatgacgcatgcttggcctaaaatgaactgacaagtgacccttgacttcg
agctctgcaagcaagacctgcatagataagcccacgatggaagaactttc
cttctatacgtaataggactattcgcagacat
gaattcactctgtagatcatgctggctgtaaacaatgaaatcggcctgcc
tctccttcccaaatgcttcaattaaagacatgaaccatcactgaccagct
gcctttagcttaataaaagtatgacatgtaaagccttactaattaaaact
gcttttatattacagttgtttattatattattagggtttaagattgaaat
atactcccattttatggtgattttgtatttgtgggttttttcaattttat
aaattggagatttcatttgttcacacttcaaattttgtaccctttcactg
tttcccttctgcaaatccactatgccatcccccctttaccctgcttctat
gagggagctcccctacccacatacccactcttgcttcagcacccaagcat
tcatctacactggggaatcaagccttcacaggaccaagggactcccctcc
cattgatgacagatagagagcttcaactacttcagtccttcccctaacac
cttcattggagtccctgtgttcagtccaatggttgactgtgaacatccac
atctgtattggtcaggatctggcaaagcctcctaggagacagctgtatca
gtctcctttccacaagcacttcttgccatccacaatagtgtctgggtttg
gtatctgcatttgtgatggatcttcaggtggggcaggctgtgtgtggcct
ttaatttcagtctctgatcttctctttgtcccatttattcccatagatag
gaacaattctgagttaaaattttgtaggtgtgtgggtggtcctatccctc
actgggagccatgcctaacctctggctattgtctcgacagattctctttc
cgattctgggaatatttcagctaatatcatcgctgtacgtcctggggatg
ctctgatttcctggcatctgggactttctttttgctaaaaaacagtccct
gtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9090147_9090895
seq2: B6Ng01-056L10.g_69_818

seq1  GAATTCACTCTGTAGATCATGCTGGCTGTAAACAATGAAATCGGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGATCATGCTGGCTGTAAACAATGAAATCGGCCTGCC  50

seq1  TCTCCTTCCCAAATGCTTCAATTAAAGACATGAACCATCACTGACCAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTCCCAAATGCTTCAATTAAAGACATGAACCATCACTGACCAGCT  100

seq1  GCCTTTAGCTTAATACAAGTATGACATGTAAAGCCTTACTAATTAAAACT  150
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GCCTTTAGCTTAATAAAAGTATGACATGTAAAGCCTTACTAATTAAAACT  150

seq1  GCTTTTATATTACAGTTGTTTATTATATTATTAGGGTTTAAGATTGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTATATTACAGTTGTTTATTATATTATTAGGGTTTAAGATTGAAAT  200

seq1  ATACTCCCATTTTATGGTGATTTTGTATTTGTGGGTTTTTTCAATTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCCCATTTTATGGTGATTTTGTATTTGTGGGTTTTTTCAATTTTAT  250

seq1  AAATTGGAGATTTCATTTGTTCACATTTCAAATTTTGTACCCTTTCACTG  300
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAATTGGAGATTTCATTTGTTCACACTTCAAATTTTGTACCCTTTCACTG  300

seq1  TTTCCCTTCTGCAAATCCACTATGCCATCCCCCCTTTACCCTGCTTCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTCTGCAAATCCACTATGCCATCCCCCCTTTACCCTGCTTCTAT  350

seq1  GAGGGAGCTCCCCTACCCACATACCCACTCTTGCTTCAGCACCCAAGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGCTCCCCTACCCACATACCCACTCTTGCTTCAGCACCCAAGCAT  400

seq1  TCATCTACACTGGGGAATCAAGCCTTCACAGGAACAAGGGACTCCCCTCC  450
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCATCTACACTGGGGAATCAAGCCTTCACAGGACCAAGGGACTCCCCTCC  450

seq1  CATTGATGACAGATAGAGAGCTTCAACTACTTCAGTCCTTCCCCTAACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATGACAGATAGAGAGCTTCAACTACTTCAGTCCTTCCCCTAACAC  500

seq1  CTTCATTGGAGTCCCTGTGTTCAGTCCAATGGTTGACTGTGAACATCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTGGAGTCCCTGTGTTCAGTCCAATGGTTGACTGTGAACATCCAC  550

seq1  ATCTGTATTGGTCAGGATCTGGCAAAGCCTCCTAGGAGACAGCTGTATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTATTGGTCAGGATCTGGCAAAGCCTCCTAGGAGACAGCTGTATCA  600

seq1  GTCTCCTTTCCACAAGCACTTCTTGCCATCCACAATAGTGTCTGGGTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTTTCCACAAGCACTTCTTGCCATCCACAATAGTGTCTGGGTTTG  650

seq1  GTATCTGCATTTGTGATGGATCTTCAGGTGGGGCAGGCTGTGTGTGGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTGCATTTGTGATGGATCTTCAGGTGGGGCAGGCTGTGTGTGGCCT  700

seq1  TT-ATTTCAGTCTCTGATCTTCTCTTTGTCCCATTATTTCCAATAGATAG  749
      || ||||||||||||||||||||||||||||||||  |||| ||||||||
seq2  TTAATTTCAGTCTCTGATCTTCTCTTTGTCCCATTTATTCCCATAGATAG  750