BAC Information

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BAC

Clone NameB6Ng01-057E18
Chromosome7 (Build37)
Map Location 70,765,962 - 70,922,084
singlet/doubletdoublet
Overlap geneOtud7a
Upstream geneEG665038, LOC669222, LOC384631, LOC622243, EG622251, Chrna7, LOC545971, LOC100041386
Downstream geneLOC665083, Klf13, E030018B13Rik, Trpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee, Apba2, 5730507A09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057E18.bB6Ng01-057E18.g
ACCDH879208DH879209
length1,1001,001
definitionDH879208|Mus musculus domesticus DNA, BAC clone: B6Ng01-057E18, 5' end.DH879209|Mus musculus domesticus DNA, BAC clone: B6Ng01-057E18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,920,971 - 70,922,084)(70,765,962 - 70,766,966)
sequence
gaattctaactaaatcagaagagacaaggacaaaatcagaccactttgtt
atctttaatgcgtgcttgtaacaggctgagaacataagctgaaacaggtg
attctgttgtgctatgagatgatgcagggaattctcctccagaaatttag
ttgaataagcagttatttgaatctaaacataaagccaacctggagtaggt
tttgaggtagtattccccatcttggtggaaggtagaccattattaactag
acccagctttatctttagaagggaaagtagggagggtatttcactggcat
tgctgtttaaaaaaaagattatgtcactttgctacaagccagtttgactt
aaatagaaaacatttggttagccatttatgatctgaactctagacatgca
atcaattaaatcataacacgtacaaccatgggacagtcctgttttataat
ggagacactggctactgctcaattgctgtttagaaataagctaccacgcc
tgccctgcctttctttttgccactgacagcaaaggtcatttcggttgtgg
gctgctctgttgggactcctcagatcttccttcagcatgttcacgaggcc
ctcatgcctgttgaatgggggatgtctgtgagggaattcagtgcctgacc
tgcattaagcacaagcagaccatgatctggccgattcagcactttgcccc
tttcatggtgtggcatggatgtaaactaaagtcttcttgcctttctcctc
ctcgctccatcttcattctgcacggcctcccaggccccgcccattgctct
cctgttgctgacatgacccatgttcctgaccagaagctggatgctctgat
gccattttcagaaagtcattaatactatttgatgtctgaacagaacataa
taagtatttctacttttatccctcccgaatttgagtgttagcagaggaat
actggcttctgagttcaaaataatttcttaaaacttggaagaacacctcg
gagcactcggctattaattaaaacatctatctgtgcagccaggtctatca
gggcttcttcttcccattactgcctttctgcgcctttccgagtctgagat

gaattctcagatagaatcacccagcagcacattttaaatcttcatttcac
atattcattcagaagagagccaagcagaaggcaaatcgtctgggcgaagg
cgcttttgagtagctaagctatatatagtcagaaaagaaagcctaggtgt
aggacactaagttaaaccacttctacagagaaatataaaccatttgaggt
tgctttttattaggcaataaaaatcataattatccatttctacagcagcc
ctctgacttttgaatttttatcagaggtgaatcattaaatatttatgatg
cttttcaagagttatagaataagatcaagcaggcttaccagcttatattg
gagcaggatatcaaagtgttaagaaatctgaatttccctctttctgctaa
ctggggtattaatttttgggtaacaggtaaaatatggtggctgctaggtg
agaaggtaccgggtagtattcttaggtgcctttagcctgcatggtgaact
tgattcagagtgtggatattctggcagtcagcagctggcaaggatcccca
atatttctgcctccttatactattctgtgtcaggggcccagtaactggtc
cttggtaaacagaaggtgatggctgccacaaggatgatggcctcccagta
tgtgacaatcctcatcagcagtccagctaaggaaggttgggggtcttagt
aagggacccttttctagctgagccttcccctgaggtcatagccctaacca
gcattgggttgacagcctggggagagaatccactcaagttgcatgctggt
tgctgctctataggcaatatgaggatataaacacattttattttaagagg
tcagttgttactgtatgggtagcctgtctgatgtggaagatgtgtgcact
caaatgaacaacttctgagcagacttttgcttgtcctttttctgttgaag
gtcaccagcctcctcccctgtcccattctaggagtattaatctttccttt
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_70920971_70922084
seq2: B6Ng01-057E18.b_46_1145 (reverse)

seq1  ATCTCCAGACTCGGAAAGGCTGGCAGCAAAGGGCAGTGAATGAGGAGATG  50
      |||| |||||||||||||||  ||||  || |||||| |||| | ||| |
seq2  ATCT-CAGACTCGGAAAGGC--GCAG--AAAGGCAGT-AATGGGAAGAAG  44

seq1  GAAGGCCCTGATAGAACCTGGCTGTCACAG-TAGATGTTTTAGCTAATAG  99
        | |||||||||| ||||||||| ||||| |||||||||||  ||||||
seq2  --AAGCCCTGATAG-ACCTGGCTG-CACAGATAGATGTTTTAATTAATAG  90

seq1  CCGAGTTGCTCCGAGTTGTTCTTCCAAGGTTTTAAGAAATTATTTTGAAC  149
      ||||| ||||||||| ||||||||||| ||||||||||||||||||||||
seq2  CCGAG-TGCTCCGAGGTGTTCTTCCAA-GTTTTAAGAAATTATTTTGAAC  138

seq1  TCAGAAGGCAGTACTCCTCTGCTGAACACTCAAATTCTGTGGGGGATAAA  199
      ||||||| ||||| ||||||||| ||||||||||||| | | ||||||||
seq2  TCAGAAGCCAGTATTCCTCTGCT-AACACTCAAATTC-GGGAGGGATAAA  186

seq1  AGTAGAAATACTTATTATGTTCTGTTCAGACATTCAAATAGTATTAATGA  249
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGTAGAAATACTTATTATGTTCTGTTCAGACA-TCAAATAGTATTAATGA  235

seq1  CTTTTCTGAAAATGGCATCAGAGCATCCAGCTTCTGGTCAGGAACATGGG  299
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-TTTCTGAAAATGGCATCAGAGCATCCAGCTTCTGGTCAGGAACATGGG  284

seq1  TCATGTCAGCAACAGGAGAGCAATGGGCGGGGCCTGGGAGGCCGTGCAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCAGCAACAGGAGAGCAATGGGCGGGGCCTGGGAGGCCGTGCAGA  334

seq1  ATGAAGATGGAGCGAGGAGGAGAAAGGCAAGAAGACTTTAGTTTACATCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGATGGAGCGAGGAGGAGAAAGGCAAGAAGACTTTAGTTTACATCC  384

seq1  ATGCCACACCATGAAAGGGGC-AAGTGCTGAATCGGCCAGATCATGGTCT  448
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATGCCACACCATGAAAGGGGCAAAGTGCTGAATCGGCCAGATCATGGTCT  434

seq1  GCTTGTGCTTAATGCAGGTCAGGCACTGAATTCCCTCACAGACATCCCCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGCTTAATGCAGGTCAGGCACTGAATTCCCTCACAGACATCCCCC  484

seq1  ATTCAACAGGCATGAGGGCCTCGTGAACATGCTGAAGGAAGATCTGAGGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACAGGCATGAGGGCCTCGTGAACATGCTGAAGGAAGATCTGAGGA  534

seq1  GTCCCAACAGAGCAGCCCACAACCGAAATGACCTTTGCTGTCAGTGGCAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAACAGAGCAGCCCACAACCGAAATGACCTTTGCTGTCAGTGGCAA  584

seq1  AAAGAAAGGCAGGGCAGGCGTGGTAGCTTATTTCTAAACAGCAATTGAGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGGCAGGGCAGGCGTGGTAGCTTATTTCTAAACAGCAATTGAGC  634

seq1  AGTAGCCAGTGTCTCCATTATAAAACAGGACTGTCCCATGGTTGTACGTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCCAGTGTCTCCATTATAAAACAGGACTGTCCCATGGTTGTACGTG  684

seq1  TTATGATTTAATTGATTGCATGTCTAGAGTTCAGATCATAAATGGCTAAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATTTAATTGATTGCATGTCTAGAGTTCAGATCATAAATGGCTAAC  734

seq1  CAAATGTTTTCTATTTAAGTCAAACTGGCTTGTAGCAAAGTGACATAATC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTTTTCTATTTAAGTCAAACTGGCTTGTAGCAAAGTGACATAATC  784

seq1  TTTTTTTTAAACAGCAATGCCAGTGAAATACCCTCCCTACTTTCCCTTCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAAACAGCAATGCCAGTGAAATACCCTCCCTACTTTCCCTTCT  834

seq1  AAAGATAAAGCTGGGTCTAGTTAATAATGGTCTACCTTCCACCAAGATGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAAAGCTGGGTCTAGTTAATAATGGTCTACCTTCCACCAAGATGG  884

seq1  GGAATACTACCTCAAAACCTACTCCAGGTTGGCTTTATGTTTAGATTCAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATACTACCTCAAAACCTACTCCAGGTTGGCTTTATGTTTAGATTCAA  934

seq1  ATAACTGCTTATTCAACTAAATTTCTGGAGGAGAATTCCCTGCATCATCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGCTTATTCAACTAAATTTCTGGAGGAGAATTCCCTGCATCATCT  984

seq1  CATAGCACAACAGAATCACCTGTTTCAGCTTATGTTCTCAGCCTGTTACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCACAACAGAATCACCTGTTTCAGCTTATGTTCTCAGCCTGTTACA  1034

seq1  AGCACGCATTAAAGATAACAAAGTGGTCTGATTTTGTCCTTGTCTCTTCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACGCATTAAAGATAACAAAGTGGTCTGATTTTGTCCTTGTCTCTTCT  1084

seq1  GATTTAGTTAGAATTC  1114
      ||||||||||||||||
seq2  GATTTAGTTAGAATTC  1100

seq1: chr7_70765962_70766966
seq2: B6Ng01-057E18.g_69_1069

seq1  GAATTCTCAGACAGAATCACCCAGCAGCACATTTTAAATCTTCATTTCAC  50
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGATAGAATCACCCAGCAGCACATTTTAAATCTTCATTTCAC  50

seq1  ATATTCATTCAGAAGAGAGCCAAGCAGAAGGCAAATCGTCTGGGCGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCATTCAGAAGAGAGCCAAGCAGAAGGCAAATCGTCTGGGCGAAGG  100

seq1  CGCTTTTGAGTAGCTAAGCTATATATAGTCAGAAAAGAAAGCCTAGGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTTGAGTAGCTAAGCTATATATAGTCAGAAAAGAAAGCCTAGGTGT  150

seq1  AGGACACTAAGTTAAACCACTTCTACAGAGAAATATAAACCATTTGAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACACTAAGTTAAACCACTTCTACAGAGAAATATAAACCATTTGAGGT  200

seq1  TGCTTTTTATTAGGCAATAAAAATCATAATTATCCATTTCTACAGCAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTTATTAGGCAATAAAAATCATAATTATCCATTTCTACAGCAGCC  250

seq1  CTCTGACTTTTGAATTTTTATCAGAGGTGAATCATTAAATATTTATGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACTTTTGAATTTTTATCAGAGGTGAATCATTAAATATTTATGATG  300

seq1  CTTTTCAAGAGTTATAGAATAAGATCAAGCAGGCTTACCAGCTTATATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAAGAGTTATAGAATAAGATCAAGCAGGCTTACCAGCTTATATTG  350

seq1  GAGCAGGATATCAAAGTGTTAAGAAATCTGAATTTCCCTCTTTCTGCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGGATATCAAAGTGTTAAGAAATCTGAATTTCCCTCTTTCTGCTAA  400

seq1  CTGGGGTATTAATTTTTGGGTAACAGGTAAAATATGGTGGCTGCTAGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTATTAATTTTTGGGTAACAGGTAAAATATGGTGGCTGCTAGGTG  450

seq1  AGAAGGTACCGGGTAGTATTCTTAGGTGCCTTTAGCCTGCATGGTGAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTACCGGGTAGTATTCTTAGGTGCCTTTAGCCTGCATGGTGAACT  500

seq1  TGATTCAGAGTGTGGATATTCTGGCAGTCAGCAGCTGGCAAGGATCCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCAGAGTGTGGATATTCTGGCAGTCAGCAGCTGGCAAGGATCCCCA  550

seq1  ATATTTCTGCCTCCTTATACTATTCTGTGTCAGGGGCCCAGTAACTGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTGCCTCCTTATACTATTCTGTGTCAGGGGCCCAGTAACTGGTC  600

seq1  CTTGGTAAACAGAAGGTGATGGCTGCCACAAGGATGATGGCCTCCCAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTAAACAGAAGGTGATGGCTGCCACAAGGATGATGGCCTCCCAGTA  650

seq1  TGTGACAATCCTCATCAGCAGTCCAGCTAAGGAAGGTTGGGGGTCTTAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAATCCTCATCAGCAGTCCAGCTAAGGAAGGTTGGGGGTCTTAGT  700

seq1  AAGGGACCCTTTTCTAGCTGAGCCTTCCCCTGAGGTCATAGCCCTAACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGACCCTTTTCTAGCTGAGCCTTCCCCTGAGGTCATAGCCCTAACCA  750

seq1  GCATTGGGTTGACAGCCTGGGGAGAGAATCCACTCAAGTTGCATGCTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGGTTGACAGCCTGGGGAGAGAATCCACTCAAGTTGCATGCTGGT  800

seq1  TGCTGCTCTATAGGCAATATGAGGATATAAACACATTTCA-TTTAAGAGG  849
      |||||||||||||||||||||||||||||||||||||| | |||||||||
seq2  TGCTGCTCTATAGGCAATATGAGGATATAAACACATTTTATTTTAAGAGG  850

seq1  TCAGTTGTTTACTGTAATGGTAGCCTGTCTGATGTGGAAGATGTGTGCAC  899
      ||||||| ||||||||  ||||||||||||||||||||||||||||||||
seq2  TCAGTTG-TTACTGTATGGGTAGCCTGTCTGATGTGGAAGATGTGTGCAC  899

seq1  TCAAATGTACAAC-TCTGAGCAGACCTTTTGCTTGTCCCTTTTTCTGTTG  948
      ||||||| ||||| |||||||||| ||||||||||| |||||||||||||
seq2  TCAAATGAACAACTTCTGAGCAGA-CTTTTGCTTGT-CCTTTTTCTGTTG  947

seq1  AAAGGTCACCAGCCTTCCTCCACTGGCCCATTCTTGGATGTATTAATCTT  998
       ||||||||||||| |||||| ||| |||||||| ||| |||||||||||
seq2  -AAGGTCACCAGCC-TCCTCCCCTGTCCCATTCTAGGA-GTATTAATCTT  994

seq1  CCCTTTC  1005
       ||||||
seq2  TCCTTTC  1001