BAC Information

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BAC

Clone NameB6Ng01-057F03
Chromosome7 (Build37)
Map Location 96,253,704 - 96,407,661
singlet/doubletdoublet
Overlap geneTmem135
Upstream geneGrm5, Ctsc, LOC100039756, Rab38, LOC100039924, LOC666598, EG621562
Downstream geneLOC100039969, Fzd4, Prss23, LOC100040001, Me3, Ccdc81, l7Rn6, Eed, E230029C05Rik, EG384719, 2310010J17Rik, Picalm, Ccdc83
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057F03.bB6Ng01-057F03.g
ACCDH879224DH879225
length1,0841,030
definitionDH879224|Mus musculus domesticus DNA, BAC clone: B6Ng01-057F03, 5' end.DH879225|Mus musculus domesticus DNA, BAC clone: B6Ng01-057F03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,253,704 - 96,254,808)(96,406,622 - 96,407,661)
sequence
gaattcagtcaacatagacttattttcaaagttatattaagcaagatctg
aaaaaaacagtgtccagttactgacaaataaacaaaagggcccccaaaaa
aatgtgtttagactatgtttcaggggttagccagtcccaagttattctgt
tacaattcaatgaagtcctaggtttattctttttaaataacacacacgaa
ggaattcttacacatcttgtcaatatttagaagcagaagctcacatacta
tatctttggttccttgtaatatttgttttcctacctggtgtcttttccaa
aattgcttcttaaactctgttttagccagtgtatatctcatattccaaca
ttgaaaaactccaagaagcctttgaaattgccgactttattgcttctttt
cgtagacatcaaacacctacacattgattttctcagtactaattctctca
gttgcacttcccaacaataatcttgtctcttttcagagaaaatttgccta
actaggtttgtctcctcagaccagtgcttccaactcttaagacacaggca
gctctaactctatgttcatctggacttcccgcctcacaattgaatccacc
tccaacacacctcccagatgtctggcctccccactaatgccatcttacta
gccagcttaggtagggtggggaatctctaacctgcccttcagcatctctc
aaggcctctttgctgacagtttgtttccattttacaatatatgttgcccc
tattctaattagtaagggtttcgggacaagtataacagcctcatgcagcc
cctgagagattgacatgatgctattgcggatccggttattaattcatacc
agaaaccaacccattagacaatttgggaagtatcttgtttatttttagta
tttttctctcaattggaaaatttgcacattcaatggtattccccaagtat
gcctaagagttggcatcttaacatttatgtaattcaagaagtcagaatac
atattcccttaaagctcccatatctgtcaaattgagtcaagaattgaatg
attaatgccaaaatgatggttggtcaatgggaaa
gaattcatgtgggtgattgttggccgttacagctttattatgtttaaaat
aagaaaacagtgacattgaaacctcccttctctattacatgtggcttcaa
tttgcattttaatcagagtatggaagtcattactctgacatctgaaactt
tggtagccgtaaaagttatcactcacaggacagcagacatagtttatttt
gtgtttattactgggtggccctcttgaaactttcctgaacctaattgaat
ccagatattagaaaattaaattaattatttaaatactattaaatcatgac
atttattttggatgtatttagttgaattgtgttaactggtttgatacatg
tgaatgtttaagattacaaagacttccggcatgtatgctcagacatctac
ttggttgtatttccagaagatttcaagtggatattttctgcctaatttgt
acacaataaaagaaatcattagttttattctttccattatacatagttcc
ttcataactcttgactgatgtcatataaatttatttcttaaacccatcag
actattattgataatttctttgtgttttactatgctttctgtaaatcttg
ctctatttcaaaactttaagccatttctcatgataaaagtctctagttcc
ttgttgtctgttcacttacttttttttggtcagcactacttgggcatata
tttccttggtatccagcaagtctaagaagctgatcattcctgccctagat
atttgagctcaggcctaggaaaggacagcctttgtttttagattgagatg
gttggttttgcttgtgatgtaggtcatgtgatctctatgtcaatgtcagc
tttggcagcataggacagacacccctagatatatataatgaacgaacatg
gatgcattccaataaactttgtttacggacactggaacttgaaattttat
aattttcacctgtcagaggaatagcatccttttgttttgaattttagaag
atttgggttatctccaggtgtcatagcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_96253704_96254808
seq2: B6Ng01-057F03.b_41_1124

seq1  GAATTCAGTCAACATAGACTTATTTTCAAAGTTATATTAAGCAAGATCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCAACATAGACTTATTTTCAAAGTTATATTAAGCAAGATCTG  50

seq1  AAAAAAACAGTGTCCAGTTACTGACAAATAAACAAAAGGGCCCCCAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACAGTGTCCAGTTACTGACAAATAAACAAAAGGGCCCCCAAAAA  100

seq1  AATGTGTTTAGACTATGTTTCAGGGGTTAGCCAGTCCCAAGTTATTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTTTAGACTATGTTTCAGGGGTTAGCCAGTCCCAAGTTATTCTGT  150

seq1  TACAATTCAATGAAGTCCTAGGTTTATTCTTTTTAAATAACACACACGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTCAATGAAGTCCTAGGTTTATTCTTTTTAAATAACACACACGAA  200

seq1  GGAATTCTTACACATCTTGTCAATATTTAGAAGCAGAAGCTCACATACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCTTACACATCTTGTCAATATTTAGAAGCAGAAGCTCACATACTA  250

seq1  TATCTTTGGTTCCTTGTAATATTTGTTTTCCTACCTGGTGTCTTTTCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTGGTTCCTTGTAATATTTGTTTTCCTACCTGGTGTCTTTTCCAA  300

seq1  AATTGCTTCTTAAACTCTGTTTTAGCCAGTGTATATCTCATATTCCAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTTCTTAAACTCTGTTTTAGCCAGTGTATATCTCATATTCCAACA  350

seq1  TTGAAAAACTCCAAGAAGCCTTTGAAATTGCCGACTTTATTGCTTCTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAACTCCAAGAAGCCTTTGAAATTGCCGACTTTATTGCTTCTTTT  400

seq1  CGTAGACATCAAACACCTACACATTGATTTTCTCAGTACTAATTCTCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGACATCAAACACCTACACATTGATTTTCTCAGTACTAATTCTCTCA  450

seq1  GTTGCACTTCCCAACAATAATCTTGTCTCTTTTCAGAGAAAATTTGCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCACTTCCCAACAATAATCTTGTCTCTTTTCAGAGAAAATTTGCCTA  500

seq1  ACTAGGTTTGTCTCCTCAGACCAGTGCTTCCAACTCTTAAGACACAGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGTTTGTCTCCTCAGACCAGTGCTTCCAACTCTTAAGACACAGGCA  550

seq1  GCTCTAACTCTATGTTCATCTGGACTTCCCGCCTCACAATTGAATCCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAACTCTATGTTCATCTGGACTTCCCGCCTCACAATTGAATCCACC  600

seq1  TCCAACACACCTCCCAGATGTCTGGCCTCCCCACTAATGCCATCTTACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACACACCTCCCAGATGTCTGGCCTCCCCACTAATGCCATCTTACTA  650

seq1  GCCAGCTTAGGTAGGGTGGGGAATCTCTAACCTGCCCTTCAGCATCTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCTTAGGTAGGGTGGGGAATCTCTAACCTGCCCTTCAGCATCTCTC  700

seq1  AAGGCCTCTTTGCTGACAGTTTGTTTCCATTTTACAATATATGTTGCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTCTTTGCTGACAGTTTGTTTCCATTTTACAATATATGTTGCCCC  750

seq1  TATTCTAATTAGTAAGGGTTTCGGGACAAGTATAACAGCCTCATGCAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTAATTAGTAAGGGTTTCGGGACAAGTATAACAGCCTCATGCAGCC  800

seq1  CCTGAGAGATTGACATGATGCTATTGCGGATCCGGTTATTAATTCATACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGAGATTGACATGATGCTATTGCGGATCCGGTTATTAATTCATACC  850

seq1  AGAAACCAACCCATTAGACAATTTGGGAAGTATCTTGTTTATTTTTAAGT  900
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGAAACCAACCCATTAGACAATTTGGGAAGTATCTTGTTTATTTTT-AGT  899

seq1  ATTTTTCTCTCAATTGGAAAATTTGCACAATTCAAATGGTTATTCCCCAA  950
      |||||||||||||||||||||||||||| |||| ||||| |||||||| |
seq2  ATTTTTCTCTCAATTGGAAAATTTGCAC-ATTC-AATGG-TATTCCCC-A  945

seq1  AGTATGCCTAAGAGTTGGCAATCTTAACATTTATGTAATTTCCAAGAAGT  1000
      ||||||||||||||||||| ||||||||||||||||||||  ||||||||
seq2  AGTATGCCTAAGAGTTGGC-ATCTTAACATTTATGTAATT--CAAGAAGT  992

seq1  CAGGATTACATATTCCCTTAAAAGCTTCCACCAATATCTGTTCAAATTGA  1050
      || || ||||||||||||| ||||||    || ||||||| |||||||||
seq2  CA-GAATACATATTCCCTT-AAAGCT----CCCATATCTG-TCAAATTGA  1035

seq1  GTCAAAGTATTTGAAATGATTTAGTGCCAAAAATGGATGGTTGTTCAATG  1100
      ||| ||| |||   ||||| ||| ||||||||   |||||||| ||||||
seq2  GTC-AAGAATT--GAATGA-TTAATGCCAAAA--TGATGGTTGGTCAATG  1079

seq1  GGAAA  1105
      |||||
seq2  GGAAA  1084

seq1: chr7_96406622_96407661
seq2: B6Ng01-057F03.g_69_1098 (reverse)

seq1  TTTGCTATGACAGCCCTGGACGATAACACAAATACTTCTAAAAATCAAAA  50
      ||||||||||||  |||||| |||||| ||||| ||||||||| || |||
seq2  TTTGCTATGACA--CCTGGA-GATAACCCAAAT-CTTCTAAAATTC-AAA  45

seq1  ACAAAAGGATGCTATTTCTCTTGACATGTGAAAATTATAAAATTTCAAGT  100
      |||||||||||||||| ||| ||||| |||||||||||||||||||||||
seq2  ACAAAAGGATGCTATTCCTC-TGACAGGTGAAAATTATAAAATTTCAAGT  94

seq1  TTCAGTGTCCGTAAACAAAGTTTTATTGGAATGCATCCATGTTCGTTCAT  150
      | |||||||||||||||||| |||||||||||||||||||||||||||| 
seq2  TCCAGTGTCCGTAAACAAAG-TTTATTGGAATGCATCCATGTTCGTTCA-  142

seq1  TTATATATATTCTAGGGGTGTTCTGTCCTATGCTGCCAAAGCTGACATTG  200
      ||||||||| |||||||||| |||||||||||||||||||||||||||||
seq2  TTATATATA-TCTAGGGGTG-TCTGTCCTATGCTGCCAAAGCTGACATTG  190

seq1  ACATAGAGATCACATGACCTACATCACAAGCAAAACCAACCATCTCAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAGATCACATGACCTACATCACAAGCAAAACCAACCATCTCAATC  240

seq1  TAAAAACAAAGGCTGTCCTTTCCTAGGCCTGAGCTCAAATATCTAGGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACAAAGGCTGTCCTTTCCTAGGCCTGAGCTCAAATATCTAGGGCA  290

seq1  GGAATGATCAGCTTCTTAGACTTGCTGGATACCAAGGAAATATATGCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGATCAGCTTCTTAGACTTGCTGGATACCAAGGAAATATATGCCCA  340

seq1  AGTAGTGCTGACCAAAAAAAAGTAAGTGAACAGACAACAAGGAACTAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTGCTGACCAAAAAAAAGTAAGTGAACAGACAACAAGGAACTAGAG  390

seq1  ACTTTTATCATGAGAAATGGCTTAAAGTTTTGAAATAGAGCAAGATTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTATCATGAGAAATGGCTTAAAGTTTTGAAATAGAGCAAGATTTAC  440

seq1  AGAAAGCATAGTAAAACACAAAGAAATTATCAATAATAGTCTGATGGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCATAGTAAAACACAAAGAAATTATCAATAATAGTCTGATGGGTT  490

seq1  TAAGAAATAAATTTATATGACATCAGTCAAGAGTTATGAAGGAACTATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAATAAATTTATATGACATCAGTCAAGAGTTATGAAGGAACTATGT  540

seq1  ATAATGGAAAGAATAAAACTAATGATTTCTTTTATTGTGTACAAATTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGGAAAGAATAAAACTAATGATTTCTTTTATTGTGTACAAATTAGG  590

seq1  CAGAAAATATCCACTTGAAATCTTCTGGAAATACAACCAAGTAGATGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATATCCACTTGAAATCTTCTGGAAATACAACCAAGTAGATGTCT  640

seq1  GAGCATACATGCCGGAAGTCTTTGTAATCTTAAACATTCACATGTATCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATACATGCCGGAAGTCTTTGTAATCTTAAACATTCACATGTATCAA  690

seq1  ACCAGTTAACACAATTCAACTAAATACATCCAAAATAAATGTCATGATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTTAACACAATTCAACTAAATACATCCAAAATAAATGTCATGATTT  740

seq1  AATAGTATTTAAATAATTAATTTAATTTTCTAATATCTGGATTCAATTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTATTTAAATAATTAATTTAATTTTCTAATATCTGGATTCAATTAG  790

seq1  GTTCAGGAAAGTTTCAAGAGGGCCACCCAGTAATAAACACAAAATAAACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGGAAAGTTTCAAGAGGGCCACCCAGTAATAAACACAAAATAAACT  840

seq1  ATGTCTGCTGTCCTGTGAGTGATAACTTTTACGGCTACCAAAGTTTCAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGCTGTCCTGTGAGTGATAACTTTTACGGCTACCAAAGTTTCAGA  890

seq1  TGTCAGAGTAATGACTTCCATACTCTGATTAAAATGCAAATTGAAGCCAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAGTAATGACTTCCATACTCTGATTAAAATGCAAATTGAAGCCAC  940

seq1  ATGTAATAGAGAAGGGAGGTTTCAATGTCACTGTTTTCTTATTTTAAACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATAGAGAAGGGAGGTTTCAATGTCACTGTTTTCTTATTTTAAACA  990

seq1  TAATAAAGCTGTAACGGCCAACAATCACCCACATGAATTC  1040
      ||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAGCTGTAACGGCCAACAATCACCCACATGAATTC  1030