BAC Information

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BAC

Clone NameB6Ng01-057I08
Chromosome7 (Build37)
Map Location 99,844,104 - 99,845,173
singlet/doubletsinglet
Overlap geneLOC100040007
Upstream geneDlg2, Ccdc90b, Ankrd42, Pcf11, LOC676240
Downstream gene4632427E13Rik, Rab30, 4632434I11Rik, Prcp, A830059I20Rik, LOC100040298, LOC666783
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057I08.bB6Ng01-057I08.g
ACCDH879367DH879368
length1,2361,067
definitionDH879367|Mus musculus domesticus DNA, BAC clone: B6Ng01-057I08, 5' end.DH879368|Mus musculus domesticus DNA, BAC clone: B6Ng01-057I08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ctcagatttcatgcatgactcttatatggagaggtccgcggattctttgt
tcaggtctgagccccatttttaatggggttatttgattttctgaagtcca
ccttcttgagttctttatatatgttggatattagccccctatctgattta
ggataggtaagattctttcccaatctgttggtggtcttttgtcttattga
cggtgtcttttgccttgcagaaactttggagtttcattaggtcccatttg
tcaattctcgatcttacagcacaagccattgctgttctgttcaggaattt
ttcccctgtgcccatatcttcaaggcttttccccactttctcctctataa
gtttcagtgtctctggttttatgtgaagttccttgatccacttagatttg
accttagtacaaggagataagtatggatcgattcgcattcttctacacca
taacaaccagttgtgccagcaccaattgttgaaaatgctgtctttcttcc
actggatggttttagctcccttgtcaaagatcaagtgaccataggtgtgt
gggttcatttctgggtcttcaattctattccattggtctacttgtctgtc
tctataccagtaccatgcagtttttatcacaattgctctgtagtaaagct
ttaggtcaggcatggtgattccaccagaggttcttttatccttgagaaga
gtttttgctatcctcggttttttgttattccagatgaatttgcaaattgc
tccttctaatttgttgaagaattgagttggaattttgatggggattgcat
tgaatctgtagattgcttttggcaagatagccatttttacaatgttgatc
ctgccaatccatgagcatgggagatctttccatcttctgagatcttcttt
aatttctttcttcagagatttgaagttttatcatacagatctttcacttc
cttagttagagtcacgccgagatattttatattatttgtgactattggga
agggtgttgtttccctaattctttctcggctggttattctttgtgtgaag
aaaggcacctggttgttgatatattattattccagctactcaccgagctg
gttatcagggttaggaggtctctggtggaatttatgtacgaaataacata
catcatctgccaaaggaatatgactcctctttcaattatctctgatcctt
gttgccatgctcgctaactctcaagtccatgcggta
gaattccttaggccactacaagcagttgcccagggcagcagtttcttcac
ataccactgctgctgactgatccaaagcttttttgttgtttatatgaaat
tcaaattcaactgagtgtctgtgtttgttttggcaacttcagtcacaagg
tctcacccccagcactaacttggacaaggaggttgtcatttaccagaatt
atgccttttaaggctctgtcttcattaattggtccatcctcaagcattcc
taaggagaaagaaagctgccttttctcccttccactagcggccttggctt
agagtcacgaactgggggagaagcatcatggccccccgggggttccagct
caatctcaagtttcggacatatatccggggagttgctctccccttgactc
tgggttggcttgtgggcatccccttgcaatcagagcatcagacgctgtgc
ttaggtttccttgttcctgttgcatctttcttgaaatcagtctgttctca
caaacctccctgctgccgccactgaaactgaagcctcacatccttttgca
acctctttagcctcttttcttttgagtgcctctcagtgtaggttgtaaag
cctggatttgttcttgttgcagttgttccgtgattttgattacaggaaca
tttattttggctctgcctcctccatttcacttctctagccagcagtccca
attgaatatgtcatcacccggggcccgggttgcagcaccctacctctttc
aggtccctgcatttgttcaatgcctagcaaacctatccttatgtggtgtt
catttcccaaatgggattctcttatgagaccagctgcaataaacctatat
tttctgttggacatcaataatcagctctatggccccactctcaaaactca
aaccctatcttctttctccctgtctaactttcctggacccacattatcaa
atttctctggtcttccttgctgcttctaactgtcctgcctggtcatccaa
tctgcctgaaagcccaacccctttctttcccctgggtcaacctcaatcct
ttttcttctccaactcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_99844104_99845173
seq2: B6Ng01-057I08.g_67_1133 (reverse)

seq1  GGAGTTTGAAGAAGAGAAAGGATGTGA-GTTGACCCAGAGGAGAG-AAGG  48
      |||| ||| |||||| ||||||| ||| |||||||||| ||| || ||||
seq2  GGAG-TTGGAGAAGAAAAAGGAT-TGAGGTTGACCCAGGGGAAAGAAAGG  48

seq1  GGTTGGGCTTTCAAGGCAGATTGGATGACCAGGCAGGACAGTTAGAAGCA  98
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGTTGGGCTTTC-AGGCAGATTGGATGACCAGGCAGGACAGTTAGAAGCA  97

seq1  GCAAGGAAGACCAGAGAAATTTGATAATGTGGGTCCAGGAAAGTTAGACA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGAAGACCAGAGAAATTTGATAATGTGGGTCCAGGAAAGTTAGACA  147

seq1  GGGAGAAAGAAGATAGGGTTTGGAGTTTTGAGAGTGGGGCCATAGAGCTG  198
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGGAGAAAGAAGATAGGGTTT-GAGTTTTGAGAGTGGGGCCATAGAGCTG  196

seq1  ATTATTGATTGTCCAACAGAAAATATAGGTTTATTGCAGCTGGTCTCATA  248
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGA-TGTCCAACAGAAAATATAGGTTTATTGCAGCTGGTCTCATA  245

seq1  AGAGAATCCCATTTGGGAAATGAACACCACATAAGGATAGGTTTGCTAGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATCCCATTTGGGAAATGAACACCACATAAGGATAGGTTTGCTAGG  295

seq1  CATTGAACAAATGCAGGGACCTGAAAGAGGTAGGGTGCTGCAACCCGGGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAACAAATGCAGGGACCTGAAAGAGGTAGGGTGCTGCAACCCGGGC  345

seq1  CCCGGGTGATGACATATTCAATTGGGACTGCTGGCTAGAGAAGTGAAATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGGTGATGACATATTCAATTGGGACTGCTGGCTAGAGAAGTGAAATG  395

seq1  GAGGAGGCAGAGCCAAAATAAATGTTCCTGTAATCAAAATCACGGAACAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGCAGAGCCAAAATAAATGTTCCTGTAATCAAAATCACGGAACAA  445

seq1  CTGCAACAAGAACAAATCCAGGCTTTACAACCTACACTGAGAGGCACTCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAACAAGAACAAATCCAGGCTTTACAACCTACACTGAGAGGCACTCA  495

seq1  AAAGAAAAGAGGCTAAAGAGGTTGCAAAAGGATGTGAGGCTTCAGTTTCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAGAGGCTAAAGAGGTTGCAAAAGGATGTGAGGCTTCAGTTTCA  545

seq1  GTGGCGGCAGCAGGGAGGTTTGTGAGAACAGACTGATTTCAAGAAAGATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCGGCAGCAGGGAGGTTTGTGAGAACAGACTGATTTCAAGAAAGATG  595

seq1  CAACAGGAACAAGGAAACCTAAGCACAGCGTCTGATGCTCTGATTGCAAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGAACAAGGAAACCTAAGCACAGCGTCTGATGCTCTGATTGCAAG  645

seq1  GGGATGCCCACAAGCCAACCCAGAGTCAAGGGGAGAGCAACTCCCCGGAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCCCACAAGCCAACCCAGAGTCAAGGGGAGAGCAACTCCCCGGAT  695

seq1  ATATGTCCGAAACTTGAGATTGAGCTGGAACCCCCGGGGGGCCATGATGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTCCGAAACTTGAGATTGAGCTGGAACCCCCGGGGGGCCATGATGC  745

seq1  TTCTCCCCCAGTTCGTGACTCTAAGCCAAGGCCGCTAGTGGAAGGGAGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCCCAGTTCGTGACTCTAAGCCAAGGCCGCTAGTGGAAGGGAGAA  795

seq1  AAGGCAGCTTTCTTTCTCCTTAGGAATGCTTGAGGATGGACCAATTAATG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGCTTTCTTTCTCCTTAGGAATGCTTGAGGATGGACCAATTAATG  845

seq1  AAGACAGAGCCTTAAAAGGCATAATTCTGGTAAATGACAACCTCCTTGTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGAGCCTTAAAAGGCATAATTCTGGTAAATGACAACCTCCTTGTC  895

seq1  CAAGTTAGTGCTGGGGGTGAGACCTTGTGACTGAAGTTGCCAAAACAAAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTAGTGCTGGGGGTGAGACCTTGTGACTGAAGTTGCCAAAACAAAC  945

seq1  ACAGACACTCAGTTGAATTTGAATTTCATATAAACAACAAAAAAGCTTTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACACTCAGTTGAATTTGAATTTCATATAAACAACAAAAAAGCTTTG  995

seq1  GATCAGTCAGCAGCAGTGGTATGTGAAGAAACTGCTGCCCTGGGCAACTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTCAGCAGCAGTGGTATGTGAAGAAACTGCTGCCCTGGGCAACTG  1045

seq1  CTTGTAGTGGCCTAAGGAATTC  1070
      ||||||||||||||||||||||
seq2  CTTGTAGTGGCCTAAGGAATTC  1067