BAC Information

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BAC

Clone NameB6Ng01-058A06
Chromosome7 (Build37)
Map Location 65,563,647 - 65,724,197
singlet/doubletdoublet
Overlap genenone
Upstream geneGabrg3, Gabra5, Gabrb3, EG668807, LOC434189
Downstream geneAtp10a, LOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058A06.bB6Ng01-058A06.g
ACCDH879711DH879712
length1,1471,093
definitionDH879711|Mus musculus domesticus DNA, BAC clone: B6Ng01-058A06, 5' end.DH879712|Mus musculus domesticus DNA, BAC clone: B6Ng01-058A06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,563,647 - 65,564,807)(65,723,087 - 65,724,197)
sequence
gaattcttcttggattatgcttcagagcccctcctcacgtgtagcagata
ggaggaaatttacttcatatcactcactacaaccagatattgttatttgt
ttaaatgtctaaatgaaaaacacattttgtctcatgtggcttgcctgtca
attcacaagggcaatttgctcttgtgaatgtaaactttacccatgcaact
cctcgtaattttcaaaatataaattgtgtgatgctctgaaaaagaaagta
gactattgcatgagagtttagtctgccttacttgtctgcttcattcctcc
acgtcccactctctctagagcagtgacaatggtgtgtaactgaaattgta
cagcccttggccaaagtttgtccactctttcccaccacagaagggaaaat
gcttgtttttatgcaatgcattagaatacattttggcttgcagataagag
taactggcacagaagcttcttctcagaggatctgatctgtgagatggaaa
tcaaagacttacaatgtccaacagaggtctcagcagcattggatctaaag
atattgtgcccagcaccatggaaccatggggttttccttaactgaaactt
cattcctgtaaccatattaggggcttatataaaatgtttctttgatacaa
attcaattttttgagagcttccttaaacctttttctttatcaaccatgca
tcacccctaaagttcttctggccactcctttgaactccacaaatgctcag
agcttgcctctgtgaaacgaccgttctgcagtagttgctacttccctttc
tgtaatttgatctcttgaaagacagaggtcaattactctgtgtgatggtt
ggtccagggagtgcaaatattaggaggtgtgaccttgttggagtaggtgt
ggccttgaagtagtttgtcactgtgggcatgggctttagacactttgcac
tagcagcccagaagccattctctcctagctgtcttcagaacaagaagtaa
actcctcaattccttccagccaatgtctacctggaactgccattcttcca
tcttatggataaaatggactgaactctgaacctttagcaacccatagtaa
ttgttgtccttatagagtgatctgtctgtgactgttcacagaataca
gaattctcccaattctaagaatatctatcccaattatccattctgaaact
ggggaaataaccagagaatgcaatttccatgaaccttaaattcttttgat
caacattaagccaagggataccaggcacctccaactccttctcagaggtg
taacttggaatatatgattgatttctgaaggaacacccactgacaggacc
agcatctgtggtcttttcctgcaaaggatagctcaggagtgacaggtatt
tgaacacccagaaaaagtacaccctaagagttgaagtgcaaccagaagtt
aggtgagactacatttagtctttatacttcaaacctaactctataaccaa
cctaattccttttgaatattgcaagcacttcctatgaaagaataaaggga
atttaaaattttcagccaataacctaatcccagaagcacaactcccaatg
caaaaccacaagaaactgacaaatgaaggcagcaggactgcttccaaaat
tactacacccacagtaatgataccaatgagattggattacactagaaccc
aggcaaagatttgaaaagaattattgaaagtgttttcaaagaaatcacat
tcatataaactctggaatgaattcctggaggacacaaacacctgaatgag
atgggaagttgatatgaaaaatataactcaacaaaatacagaaattctga
gaaataataaaccagatatattagaaatgaaaaaacaaaccaaatgtcag
taagtcacataaagcaccctgcagaaagccacaccaatagagttgatcaa
gagaggacagagtaacagggcttgaagtccaggtagaagattagaatatt
caaataatgacataggtaaattaataagttgtataaaacagatccaggag
aattataaaaacaaatagattaattatgggcagagaaatggagaagactt
catgtatgggcaaagaaaagatttctgtaaactatagaagaaatataatc
ctcacctctaggaaagcaatgccatctagatatagaagcatattagttct
cttttgaaaccaagagaagacctgggaagacttcttgacttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_65563647_65564807
seq2: B6Ng01-058A06.b_47_1193

seq1  GAATTCTTCTTGGATTATGCTTCAGAGCCCCTCCTCACGTGTAGCAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTGGATTATGCTTCAGAGCCCCTCCTCACGTGTAGCAGATA  50

seq1  GGAGGAAATTTACTTCATATCACTCACTACAACCAGATATTGTTATTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAATTTACTTCATATCACTCACTACAACCAGATATTGTTATTTGT  100

seq1  TTAAATGTCTAAATGAAAAACACATTTTGTCTCATGTGGCTTGCCTGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGTCTAAATGAAAAACACATTTTGTCTCATGTGGCTTGCCTGTCA  150

seq1  ATTCACAAGGGCAATTTGCTCTTGTGAATGTAAACTTTACCCATGCAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACAAGGGCAATTTGCTCTTGTGAATGTAAACTTTACCCATGCAACT  200

seq1  CCTCGTAATTTTCAAAATATAAATTGTGTGATGCTCTGAAAAAGAAAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGTAATTTTCAAAATATAAATTGTGTGATGCTCTGAAAAAGAAAGTA  250

seq1  GACTATTGCATGAGAGTTTAGTCTGCCTTACTTGTCTGCTTCATTCCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATTGCATGAGAGTTTAGTCTGCCTTACTTGTCTGCTTCATTCCTCC  300

seq1  ACGTCCCACTCTCTCTAGAGCAGTGACAATGGTGTGTAACTGAAATTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCCCACTCTCTCTAGAGCAGTGACAATGGTGTGTAACTGAAATTGTA  350

seq1  CAGCCCTTGGCCAAAGTTTGTCCACTCTTTCCCACCACAGAAGGGAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTTGGCCAAAGTTTGTCCACTCTTTCCCACCACAGAAGGGAAAAT  400

seq1  GCTTGTTTTTATGCAATGCATTAGAATACATTTTGGCTTGCAGATAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTTTTATGCAATGCATTAGAATACATTTTGGCTTGCAGATAAGAG  450

seq1  TAACTGGCACAGAAGCTTCTTCTCAGAGGATCTGATCTGTGAGATGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGCACAGAAGCTTCTTCTCAGAGGATCTGATCTGTGAGATGGAAA  500

seq1  TCAAAGACTTACAATGTCCAACAGAGGTCTCAGCAGCATTGGATCTAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGACTTACAATGTCCAACAGAGGTCTCAGCAGCATTGGATCTAAAG  550

seq1  ATATTGTGCCCAGCACCATGGAACCATGGGGTTTTCCTTAACTGAAACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTGCCCAGCACCATGGAACCATGGGGTTTTCCTTAACTGAAACTT  600

seq1  CATTCCTGTAACCATATTAGGGGCTTATATAAAATGTTTCTTTGATACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTGTAACCATATTAGGGGCTTATATAAAATGTTTCTTTGATACAA  650

seq1  ATTCAATTTTTTGAGAGCTTCCTTAAACCTTTTTCTTTATCAACCATGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATTTTTTGAGAGCTTCCTTAAACCTTTTTCTTTATCAACCATGCA  700

seq1  TCACCCCTAAAGTTCTTCTGGCCACTCCTTTGAACTCCACAAATGCTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCCTAAAGTTCTTCTGGCCACTCCTTTGAACTCCACAAATGCTCAG  750

seq1  AGCTTGCCTCTGTGAAACGACCGTTCTGCAGTAGTTGCTACTTCCCTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGCCTCTGTGAAACGACCGTTCTGCAGTAGTTGCTACTTCCCTTTC  800

seq1  TGTAATTTGATCTCTTGAAAGACAGAGGTCAATTACTCTGTGTGATGGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTTGATCTCTTGAAAGACAGAGGTCAATTACTCTGTGTGATGGTT  850

seq1  GGTCCAGGGAGTGCAAATATTAGGAGGTGTGACCTTGTTGGAGTAGGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAGGGAGTGCAAATATTAGGAGGTGTGACCTTGTTGGAGTAGGTGT  900

seq1  GGCCTTGAAGTAGGTTTGTCACTGTGGGCATGGGCTTTAAGACACTTTGC  950
      |||||||||||| ||||||||||||||||||||||||| |||||||||||
seq2  GGCCTTGAAGTA-GTTTGTCACTGTGGGCATGGGCTTT-AGACACTTTGC  948

seq1  ACTAGCAGCCCAGAAGCCAATCTTCTCCTAGCTGTCTTCAGAACAAGAGG  1000
      ||||||||||||||||||| || ||||||||||||||||||||||||| |
seq2  ACTAGCAGCCCAGAAGCCATTC-TCTCCTAGCTGTCTTCAGAACAAGAAG  997

seq1  TAAAACTCTC-AGTCCTTCCAGCCCAATGTCTACCTGGAAACTGCCATTC  1049
      ||||   ||| | ||||||||| ||||||||||||||| |||||||||||
seq2  TAAACTCCTCAATTCCTTCCAG-CCAATGTCTACCTGG-AACTGCCATTC  1045

seq1  TTCCATCTTAATGATAAAATGGACTGAACCTCTGAACCTTTAAGCCACCC  1099
      ||||||||||  |||||||||||||||| |||||||||||| ||| ||||
seq2  TTCCATCTTATGGATAAAATGGACTGAA-CTCTGAACCTTT-AGCAACCC  1093

seq1  ATAGTTAATTGTTGTCCTTTATAAGAGTTGTCTTGTTCATGGTGACTGTT  1149
      |||| |||||||||||| |||| |||||  |||   |    |||||||||
seq2  ATAG-TAATTGTTGTCC-TTAT-AGAGTGATCTGTCT----GTGACTGTT  1136

seq1  CACAGAAATACA  1161
      ||||| ||||||
seq2  CACAG-AATACA  1147

seq1: chr7_65723087_65724197
seq2: B6Ng01-058A06.g_67_1159 (reverse)

seq1  ACAAGTCATGGATAGTCTTCTCAGGTCTTCTCTTTGGTTTTCAAAAAGAG  50
      |||||||| |   ||||||| ||||||||||| |||||||   |||||||
seq2  ACAAGTCAAG--AAGTCTTCCCAGGTCTTCTC-TTGGTTT--CAAAAGAG  45

seq1  AACT-ATATGGCTTCTATATCTAGATGGGCATTGCTTTTCCTAGAGGTGA  99
      |||| |||| |||||||||||||||| |||||||| ||||||||||||||
seq2  AACTAATAT-GCTTCTATATCTAGAT-GGCATTGC-TTTCCTAGAGGTGA  92

seq1  GGATAATATTTTCTTCTATAGTTTTACAGAAAATCTTTTCTATGCCCATA  149
      |||| ||| |||||||||||| ||||||| ||||||||||| ||||||| 
seq2  GGATTATA-TTTCTTCTATAG-TTTACAG-AAATCTTTTCTTTGCCCAT-  138

seq1  ACATGAAGTTCTTCTCCATTTTCTCTGCCCATAATTAATCTATTTTGTTT  199
      |||||||| ||||||||| ||||||||||||||||||||||||||   ||
seq2  ACATGAAG-TCTTCTCCA-TTTCTCTGCCCATAATTAATCTATTT--GTT  184

seq1  TTTATAATTCTCCTGGATCTGTTTTTATACAACCTTATTAATTTACCTAT  249
      ||||||||||||||||||||| |||||||||| |||||||||||||||||
seq2  TTTATAATTCTCCTGGATCTG-TTTTATACAA-CTTATTAATTTACCTAT  232

seq1  GTCATTATTTGAATATTCTAATTCTTCTACCTGGACTTCAAGCCCTGTTA  299
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTCATTATTTGAATATTCTAA-TCTTCTACCTGGACTTCAAGCCCTGTTA  281

seq1  CTCTGTCCTCTCTTGATCAACTCTATTGGTGTGGCTTTCTGCAGGGTGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCCTCTCTTGATCAACTCTATTGGTGTGGCTTTCTGCAGGGTGCT  331

seq1  TTATGTGACTTACTGACATTTGGTTTGTTTTTTCATTTCTAATATATCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGACTTACTGACATTTGGTTTGTTTTTTCATTTCTAATATATCTG  381

seq1  GTTTATTATTTCTCAGAATTTCTGTATTTTGTTGAGTTATATTTTTCATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTATTTCTCAGAATTTCTGTATTTTGTTGAGTTATATTTTTCATA  431

seq1  TCAACTTCCCATCTCATTCAGGTGTTTGTGTCCTCCAGGAATTCATTCCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTCCCATCTCATTCAGGTGTTTGTGTCCTCCAGGAATTCATTCCA  481

seq1  GAGTTTATATGAATGTGATTTCTTTGAAAACACTTTCAATAATTCTTTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTATATGAATGTGATTTCTTTGAAAACACTTTCAATAATTCTTTTC  531

seq1  AAATCTTTGCCTGGGTTCTAGTGTAATCCAATCTCATTGGTATCATTACT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTGCCTGGGTTCTAGTGTAATCCAATCTCATTGGTATCATTACT  581

seq1  GTGGGTGTAGTAATTTTGGAAGCAGTCCTGCTGCCTTCATTTGTCAGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGTAGTAATTTTGGAAGCAGTCCTGCTGCCTTCATTTGTCAGTTT  631

seq1  CTTGTGGTTTTGCATTGGGAGTTGTGCTTCTGGGATTAGGTTATTGGCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGGTTTTGCATTGGGAGTTGTGCTTCTGGGATTAGGTTATTGGCTG  681

seq1  AAAATTTTAAATTCCCTTTATTCTTTCATAGGAAGTGCTTGCAATATTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTAAATTCCCTTTATTCTTTCATAGGAAGTGCTTGCAATATTCA  731

seq1  AAAGGAATTAGGTTGGTTATAGAGTTAGGTTTGAAGTATAAAGACTAAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAATTAGGTTGGTTATAGAGTTAGGTTTGAAGTATAAAGACTAAAT  781

seq1  GTAGTCTCACCTAACTTCTGGTTGCACTTCAACTCTTAGGGTGTACTTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCTCACCTAACTTCTGGTTGCACTTCAACTCTTAGGGTGTACTTTT  831

seq1  TCTGGGTGTTCAAATACCTGTCACTCCTGAGCTATCCTTTGCAGGAAAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTGTTCAAATACCTGTCACTCCTGAGCTATCCTTTGCAGGAAAAG  881

seq1  ACCACAGATGCTGGTCCTGTCAGTGGGTGTTCCTTCAGAAATCAATCATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGATGCTGGTCCTGTCAGTGGGTGTTCCTTCAGAAATCAATCATA  931

seq1  TATTCCAAGTTACACCTCTGAGAAGGAGTTGGAGGTGCCTGGTATCCCTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCAAGTTACACCTCTGAGAAGGAGTTGGAGGTGCCTGGTATCCCTT  981

seq1  GGCTTAATGTTGATCAAAAGAATTTAAGGTTCATGGAAATTGCATTCTCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAATGTTGATCAAAAGAATTTAAGGTTCATGGAAATTGCATTCTCT  1031

seq1  GGTTATTTCCCCAGTTTCAGAATGGATAATTGGGATAGATATTCTTAGAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTTCCCCAGTTTCAGAATGGATAATTGGGATAGATATTCTTAGAA  1081

seq1  TTGGGAGAATTC  1111
      ||||||||||||
seq2  TTGGGAGAATTC  1093