BAC Information

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BAC

Clone NameB6Ng01-058B06
Chromosome7 (Build37)
Map Location 120,620,445 - 120,621,553
singlet/doubletsinglet
Overlap genenone
Upstream geneParva, LOC627808, Tead1, 4632411J06Rik, LOC434227, Arntl, A630005I04Rik, Btbd10, Pth, LOC100042736
Downstream geneMlstd2, EG434228, Spon1, Rras2, LOC668451, Copb1, Psma1, 4933406I18Rik, Pde3b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058B06.bB6Ng01-058B06.g
ACCDH879755DH879756
length1,2531,084
definitionDH879755|Mus musculus domesticus DNA, BAC clone: B6Ng01-058B06, 5' end.DH879756|Mus musculus domesticus DNA, BAC clone: B6Ng01-058B06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctcttcttcatggattgatacgtctgtggagtcaaaggcatg
ctcatttggcatgtacctcaacatccccactccactgccaccctcaatct
atagtctctatgatgtttatgtaagatcctggattccttgctcaaatgtc
cttggtactacctgtctggccgatatagacttttaaccccactaattctc
ccaagagaggtttgtgttatgagaatgcttaagacttggtccaaagtata
gtcaaagacaactttttgtgtgacacttagatggaagtttaacatatgag
ccagcatgtaggccagtcaaggttcatatcttcttagtcagtgctatgac
caaggaccataaactgagtgatagaaacaacagaaatctatacctcagag
tcctaaagctagagaagcactggcagacttactgtccagtgagtactact
tcctgattcacaggcagtgctttcttgctgccccctccaatgatgggagg
gaccaggcagctctttgggtcttgttaaaggcatccataccctttctaat
gacctcaccctggtgacctatgtatttttcaatagcccaactatcatatc
tctggggacaagattgcatacttgaagcctgagcacacacagcattccat
tcatagcatatgaaagaggcagggaccagaccatgggccagctactagct
tttcctctgtcagaacttatgctataaaactctgaggtatacaagagtat
aaattttaaacccagctttccaggttatcataaagatattatcatccaga
taggacacctctttgtatttaatggttcattagctgattcacagcactga
ttctgtttctgggtaaatttatggataaatacatatgaatatatacacac
aggtatgtaccatactatatttattagcttaatgttagtgtttttacctc
caccaaatctgggaaagtaggctagctcattctaacacctgtaggtctgg
agcagcataaagatgagctatgttaccaacagcacgtattgacattttta
aagaccaccagacatgcacgatggagatcccgaaacctcatttttgtaca
gcatgatctcacagattgaaaccatttgctgccactcttgaaaagaatgc
tttcgaatgggctgaactgacctccaacaagatatctgacccattctcct
caacttattcaacataccctcgtcatctaggagatgttacacatggtgaa
agc
gaattcttaggaaagtcattgccaataaatcttccttgaaataagttttg
acagtatatgttaatgatgtagacaagaaatttggtaccagctaaagaaa
gaagatatgtaagaatgggcaaatacagttgatttttcatagtttatgta
aaaaatgcttgcatggggcagcagtgataacagtctaatgtttgtagcct
gttgatacgtgaaataagcgtcaagagcatccaataggatggagcaatta
gaaatgctgtcttcgggctggtgagatggctcagcgggtaagagcacccg
actgcccttctgaaggtcctgagttcaagtcccagcaaccacatggtggc
tcacaaccatccttaaggagatctgactggtgtgtctgaagacagctgca
gtgtacttacatataataaataaatattaaaaaaaaagaaatgctgtctt
cattaaatgaaggatggtgccacttggtggatatagaatctctgaaaata
tttcacaaagatctcaaagaaaacaatagatgatcataaggaacaaaata
taagcaacttataaaaatagattataggttgagaggtcaggtcacagggg
tgtgtttgcttggcaagtagatgtctgttttttagttcttcctcttcctc
ttcttctcttacatgcaaaacttacactttattcttaagaaagggggagg
ggaaacctgctcattctttttcttttgtttttttttccaatgtaatattt
ttattgattcttcagagatttcacatcatcttccacccttgtgacctccc
ctttaatagaaaaaaaaaagccagtttatgttatctatatgctcactgga
gaatggacaaactctcagtggccagctccttaatagagctgagtcctttt
ccctctctcactcctgctggaagccgtctatttgaagagcacacttcagc
accctatcacagtattttaaaaatattattattatattatattatcattg
attttctatatacatttcaatgtatcccctctcagttcccctctggaacc
ctatacattctcctctttgcctcatgaagtgctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_120620445_120621553
seq2: B6Ng01-058B06.g_67_1150

seq1  GAATTCTTAGGAAAGTCATTGCCAATAAATCTTCCTTGAAATAAGTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGGAAAGTCATTGCCAATAAATCTTCCTTGAAATAAGTTTTG  50

seq1  ACAGTATATGTTAATGATGTAGACAAGAAATTTGGTACCAGCTAAAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATATGTTAATGATGTAGACAAGAAATTTGGTACCAGCTAAAGAAA  100

seq1  GAAGATATGTAAGAATGGGCAAATACAGTTGATTTTTCATAGTTTATGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATATGTAAGAATGGGCAAATACAGTTGATTTTTCATAGTTTATGTA  150

seq1  AAAAATGCTTGCATGGGGCAGCAGTGATAACAGTCTAATGTTTGTAGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGCTTGCATGGGGCAGCAGTGATAACAGTCTAATGTTTGTAGCCT  200

seq1  GTTGATACGTGAAATAAGCGTCAAGAGCATCCAATAGGATGGAGCAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATACGTGAAATAAGCGTCAAGAGCATCCAATAGGATGGAGCAATTA  250

seq1  GAAATGCTGTCTTCGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCTGTCTTCGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACCCG  300

seq1  ACTGCCCTTCTGAAGGTCCTGAGTTCAAGTCCCAGCAACCACATGGTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCTTCTGAAGGTCCTGAGTTCAAGTCCCAGCAACCACATGGTGGC  350

seq1  TCACAACCATCCTTAAGGAGATCTGACTGGTGTGTCTGAAGACAGCTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACCATCCTTAAGGAGATCTGACTGGTGTGTCTGAAGACAGCTGCA  400

seq1  GTGTACTTACATATAATAAATAAATATTAAAAAAAAAGAAATGCTGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACTTACATATAATAAATAAATATTAAAAAAAAAGAAATGCTGTCTT  450

seq1  CATTAAATGAAGGATGGTGCCACTTGGTGGATATAGAATCTCTGAAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAATGAAGGATGGTGCCACTTGGTGGATATAGAATCTCTGAAAATA  500

seq1  TTTCACAAAGATCTCAAAGAAAACAATAGATGATCATAAGGAACAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAAAGATCTCAAAGAAAACAATAGATGATCATAAGGAACAAAATA  550

seq1  TAAGCAACTTATAAAAATAGATTATAGGTTGAGAGGTCAGGTCACAGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAACTTATAAAAATAGATTATAGGTTGAGAGGTCAGGTCACAGGGG  600

seq1  TGTGTTTGCTTGGCAAGTAGATGTCTGTTTTTTAGTTCTTCCTCTTCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTGCTTGGCAAGTAGATGTCTGTTTTTTAGTTCTTCCTCTTCCTC  650

seq1  TTCTTCTCTTACATGCAAAACTTACACTTTATTCTTAAGAAAGGGGGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTCTTACATGCAAAACTTACACTTTATTCTTAAGAAAGGGGGAGG  700

seq1  GGAAACCTGCTCATTCTTTTTCTTTTGTTTTTTTTTCCAATGTAATATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACCTGCTCATTCTTTTTCTTTTGTTTTTTTTTCCAATGTAATATTT  750

seq1  TTATTGATTCTTCAGAGATTTCACATCATCTTCCACCCTTGTGACCTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGATTCTTCAGAGATTTCACATCATCTTCCACCCTTGTGACCTCCC  800

seq1  CTTTAATAGAAAAAAAAAAGCCCAGTTTATGTTATCTATATGCTCACTGG  850
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTTTAATAGAAAAAAAAAAG-CCAGTTTATGTTATCTATATGCTCACTGG  849

seq1  AGAATGGACAAACTCTCAGTGGCCAGCTCCTTAAATAGAGCTGAGTCC-T  899
      |||||||||||||||||||||||||||||||| ||||||||||||||| |
seq2  AGAATGGACAAACTCTCAGTGGCCAGCTCCTT-AATAGAGCTGAGTCCTT  898

seq1  TTCCCTCTCTCACTCCTGCTGGAAGCCGTCTATTTGGAGAGCAACACTTC  949
      |||||||||||||||||||||||||||||||||||| ||||| |||||||
seq2  TTCCCTCTCTCACTCCTGCTGGAAGCCGTCTATTTGAAGAGC-ACACTTC  947

seq1  AGCACCCTATCACAGTATTTTAAAAAAATTATTATTATTATTAATTATTA  999
      |||||||||||||||||||||||||| |||||||||||     |||| ||
seq2  AGCACCCTATCACAGTATTTTAAAAATATTATTATTAT-----ATTA-TA  991

seq1  TTATCATTGTATATTTTCTTTATATACATTTCAAATGTTATCCCCTCTCC  1049
      |||||||||   ||||||  |||||||||||| |||| |||||||||| |
seq2  TTATCATTG---ATTTTC--TATATACATTTC-AATG-TATCCCCTCT-C  1033

seq1  AGGTCTCCCCTCTGGAAACCCCCTATACCATTCTCCTCCTTTGCCTCTAT  1099
      ||   ||||||||||||   ||||||| ||||||||| ||||||||| ||
seq2  AG--TTCCCCTCTGGAA---CCCTATA-CATTCTCCT-CTTTGCCTC-AT  1075

seq1  GAGGGTGCTC  1109
      ||  ||||||
seq2  GA-AGTGCTC  1084