BAC Information

Click to search

BAC

Clone NameB6Ng01-058F14
Chromosome7 (Build37)
Map Location 84,461,247 - 84,583,460
singlet/doubletdoublet
Overlap genenone
Upstream geneEG244071
Downstream geneA330068G13Rik, Ntrk3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058F14.bB6Ng01-058F14.g
ACCDH879953DH879954
length1,0341,116
definitionDH879953|Mus musculus domesticus DNA, BAC clone: B6Ng01-058F14, 5' end.DH879954|Mus musculus domesticus DNA, BAC clone: B6Ng01-058F14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,461,247 - 84,461,910)(84,582,328 - 84,583,460)
sequence
gaattcagtctccaatatttaacaaaaaacagtaaaatatgtgagtagaa
aaatatacaccatgctcaaagttggagtagcctcattaatttcagaacag
aatagactttagagcatgaaaggatatcaaagataaagaagaaaccacta
tataatgataaatgagttgattctccagtaacactcaatgttcaaactgc
atattcctaacaacatcgcttcaaaacacataaagcaaaatgcaacaaaa
ctaaaacacagacaaagccactattatagttaagcactttaaaatatgtt
agtaatttctaggttggcaagactgaaaattaggaaaggcagaaataagt
ttaggacattcttgatgaacttgacataactggccttgaaagagcactcc
ctccatcactaccaaatcacacattctttccaagctcacacagaatgttt
aggaagataaaccacagtctgggacatcaaatgctatataacagatatga
aaaataaaaaccatccaaaatatgttctcagaccacagtggtattaagct
acaaatcaacaacagagagagtgggacatgcatcaaatattttggagtta
aacaacctacttgtaaataacacgtggcccaaaaatcaaacctctagaga
aattgaattttttaagcaaaacgaaaatgaaaattcaccttattaaaact
tatgaggcatagcaaatagagcacagtaggacatgttggcactgcctgta
ctagaactcatatgatctacagaatcgctatctccatgctgatgttttag
aaaactagagagatagaaagaaaactgtgtcaaacaagcaggaggaaaat
aaaatcataagttttgagtaatagggctgctgagattgcttagcaagtga
agaatgcttgcctccaaacagactaaggaccaactccagtatgtgtccct
tgcatttcaaccataactggcaccatcatcttccaacatagtgattgtaa
ataagatttgaagttagattggaccaattattaa
gaattctgtagcattcttaaagtaaaagatatttttcccaggaggaactg
aagatggccaggcaggggtaaattactctgatgcactgtcttctcagaga
atgaattaggcagaggacattgcccatgactatccctagaaatgcacctc
attatttgaaaatgaaataaaacaaaacaaaagccccaagcatgtcagct
ttcatctgttttccatgagacctgaggtccttgggatattatgaaaatag
gaacactggagaaggtcattgtgtttgagatgtaattcctgtttttcttt
tttacggtagtttactgttttctggtttgctgtgacttggtaaaattggt
acaaaatgtgtaaaaattttactgaaatggcaaacattaaataacttata
ataaacacacatttaagtttccctagtgtttccatttgtgcttgtgtgta
agtacacagccttcttcatagttgccactgttttcatttcctgtcctcaa
ttaccattgcctctcattgctgcatactatgtagacagagtggactctga
aagcaggacttatatcctgtttgacgcttttactctttataacagtgagt
gataaaattccccttaatctctgtgaaaccatcatcaaaaaggaccatat
aaacgaccctcagctattatccgcagctttatgctattccctcggcctat
ccttcctttggaccctgagtagtcacttatctactcctattactatacat
tgattcaaatatttaaagtctcatataaatgagtatatacattttccatt
tattggttggcttttcccaaccaatattagcaaatattttctaatttttc
tatatggttggggtatgaatatgtttcatgcatcaaaatcttagggcttt
actatgctagataggtactctactactgaatatatccatggcctacttgc
cttatgtgcatatttttgaagtatttactctcttcttatttgctatcata
ctatatttttggcatgaacatgaaactttttctgagtactgtgacatttg
attacaaattgtgaacaagtgtgttcatctcttggttacttgtggttgat
aaatgatcaggataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_84461247_84461910
seq2: B6Ng01-058F14.b_408_1069

seq1  GAACTTGACATAACTGGCCTTGAAAGAGCACTCCCTCCATCACTACCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTGACATAACTGGCCTTGAAAGAGCACTCCCTCCATCACTACCAAA  50

seq1  TCACACATTCTTTCCAAGCTCACACAGAATGTTTAGGAAGATAAACCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACATTCTTTCCAAGCTCACACAGAATGTTTAGGAAGATAAACCACA  100

seq1  GTCTGGGACATCAAATGCTATATAACAGATATGAAAAATAAAAACCATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGGACATCAAATGCTATATAACAGATATGAAAAATAAAAACCATCC  150

seq1  AAAATATGTTCTCAGACCACAGTGGTATTAAGCTACAAATCAACAACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATGTTCTCAGACCACAGTGGTATTAAGCTACAAATCAACAACAGA  200

seq1  GAGAGTGGGACATGCATCAAATATTTTGGAGTTAAACAACCTACTTGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTGGGACATGCATCAAATATTTTGGAGTTAAACAACCTACTTGTAA  250

seq1  ATAACACGTGGCCCAAAAATCAAACCTCTAGAGAAATTGAATTTTTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACGTGGCCCAAAAATCAAACCTCTAGAGAAATTGAATTTTTTAAG  300

seq1  CAAAACGAAAATGAAAATTCACCTTATTAAAACTTATGAGGCATAGCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACGAAAATGAAAATTCACCTTATTAAAACTTATGAGGCATAGCAAA  350

seq1  TAGAGCACAGTAGGACATGTTGGCACTGCCTGTACTAGAACTCATATGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCACAGTAGGACATGTTGGCACTGCCTGTACTAGAACTCATATGAT  400

seq1  CTACAGAATCGCTATCTCCATGCTGATGTTTTAGAAAACTAGAGAGATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGAATCGCTATCTCCATGCTGATGTTTTAGAAAACTAGAGAGATAG  450

seq1  AAAGAAAACTGTGTCAAACAAGCAGGAGGAAAATAAAATCATAAG-TTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AAAGAAAACTGTGTCAAACAAGCAGGAGGAAAATAAAATCATAAGTTTTG  500

seq1  AGTAATAGGGCTGCTGAGATTGCTTAGCAAGTGAAG-ATGCTTGCCTCCA  548
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGTAATAGGGCTGCTGAGATTGCTTAGCAAGTGAAGAATGCTTGCCTCCA  550

seq1  AACAGACTAAGGACCAACTCCAGTATGTGTCCCTTGCATCTCCACACAT-  597
      ||||||||||||||||||||||||||||||||||||||| || || ||| 
seq2  AACAGACTAAGGACCAACTCCAGTATGTGTCCCTTGCATTTCAAC-CATA  599

seq1  ACTGGCACCATCATCTCCCAACATAAGTGATTGTAAAAATAAGATTTGAA  647
      |||||||||||||||| ||||||| |||||||||  ||||||||||||||
seq2  ACTGGCACCATCATCTTCCAACAT-AGTGATTGT--AAATAAGATTTGAA  646

seq1  GTTAGGATAGGACCAAT  664
      |||| ||| ||||||||
seq2  GTTA-GATTGGACCAAT  662

seq1: chr7_84582328_84583460
seq2: B6Ng01-058F14.g_67_1182 (reverse)

seq1  TCTATCACTGATCAATTTACTCAACCACAAGTAACCAAGAGATTGGAACA  50
      |||||| |||||| ||||| |||||||||||||||||||||||  |||||
seq2  TCTATC-CTGATC-ATTTA-TCAACCACAAGTAACCAAGAGAT--GAACA  45

seq1  CATTGGTTCACATATTTGTAATCAAATGTTCACAGTACTCAG-AATAGTT  99
      || | ||||||| ||||||||||||||| ||||||||||||| || ||||
seq2  CACTTGTTCACA-ATTTGTAATCAAATG-TCACAGTACTCAGAAAAAGTT  93

seq1  TCATGTATCATGCCAAAAAATATAGTATGATAGCAAATAAAGAAGAGAGT  149
      |||||| ||||||| ||||||||||||||||||||||| |||||||||||
seq2  TCATGT-TCATGCC-AAAAATATAGTATGATAGCAAAT-AAGAAGAGAGT  140

seq1  AAAATACCTTCAAAAATAATGCACAATAAGGCAAGTAGGCCATGGATATA  199
       ||||| |||||||||| |||||| |||||||||||||||||||||||| 
seq2  -AAATA-CTTCAAAAAT-ATGCAC-ATAAGGCAAGTAGGCCATGGATAT-  185

seq1  ATTCAGTAGTAGAGTACCTATCTAGCATAGTAAAGCCCTAAGGTTTTGAT  249
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATTCAGTAGTAGAGTACCTATCTAGCATAGTAAAGCCCTAAGATTTTGAT  235

seq1  GCATGAAACATATTTCATACCCCAACCATATAGAAAAATTAGAAAATAAT  299
      |||||||||||| |||||||||||||||||||||||||||||||||| ||
seq2  GCATGAAACATA-TTCATACCCCAACCATATAGAAAAATTAGAAAAT-AT  283

seq1  TTGCTAATAATTGGTTGGGAAAAGCCAACCAATAAATGGAAAATGTATAT  349
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAAT-ATTGGTTGGGAAAAGCCAACCAATAAATGGAAAATGTATAT  332

seq1  ACTCATTTATATGAGACTTTAAATATTTGAATCAATGTATAGTAATAGGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTTATATGAGACTTTAAATATTTGAATCAATGTATAGTAATAGGA  382

seq1  GTAGATAAGTGACTACTCAGGGTCCAAAGGAAGGATAGGCCGAGGGAATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATAAGTGACTACTCAGGGTCCAAAGGAAGGATAGGCCGAGGGAATA  432

seq1  GCATAAAGCTGCGGATAATAGCTGAGGGTCGTTTATATGGTCCTTTTTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAAGCTGCGGATAATAGCTGAGGGTCGTTTATATGGTCCTTTTTGA  482

seq1  TGATGGTTTCACAGAGATTAAGGGGAATTTTATCACTCACTGTTATAAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGTTTCACAGAGATTAAGGGGAATTTTATCACTCACTGTTATAAAG  532

seq1  AGTAAAAGCGTCAAACAGGATATAAGTCCTGCTTTCAGAGTCCACTCTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAAGCGTCAAACAGGATATAAGTCCTGCTTTCAGAGTCCACTCTGT  582

seq1  CTACATAGTATGCAGCAATGAGAGGCAATGGTAATTGAGGACAGGAAATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATAGTATGCAGCAATGAGAGGCAATGGTAATTGAGGACAGGAAATG  632

seq1  AAAACAGTGGCAACTATGAAGAAGGCTGTGTACTTACACACAAGCACAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGTGGCAACTATGAAGAAGGCTGTGTACTTACACACAAGCACAAA  682

seq1  TGGAAACACTAGGGAAACTTAAATGTGTGTTTATTATAAGTTATTTAATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACACTAGGGAAACTTAAATGTGTGTTTATTATAAGTTATTTAATG  732

seq1  TTTGCCATTTCAGTAAAATTTTTACACATTTTGTACCAATTTTACCAAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCATTTCAGTAAAATTTTTACACATTTTGTACCAATTTTACCAAGT  782

seq1  CACAGCAAACCAGAAAACAGTAAACTACCGTAAAAAAGAAAAACAGGAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAAACCAGAAAACAGTAAACTACCGTAAAAAAGAAAAACAGGAAT  832

seq1  TACATCTCAAACACAATGACCTTCTCCAGTGTTCCTATTTTCATAATATC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTCAAACACAATGACCTTCTCCAGTGTTCCTATTTTCATAATATC  882

seq1  CCAAGGACCTCAGGTCTCATGGAAAACAGATGAAAGCTGACATGCTTGGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGACCTCAGGTCTCATGGAAAACAGATGAAAGCTGACATGCTTGGG  932

seq1  GCTTTTGTTTTGTTTTATTTCATTTTCAAATAATGAGGTGCATTTCTAGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGTTTTGTTTTATTTCATTTTCAAATAATGAGGTGCATTTCTAGG  982

seq1  GATAGTCATGGGCAATGTCCTCTGCCTAATTCATTCTCTGAGAAGACAGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTCATGGGCAATGTCCTCTGCCTAATTCATTCTCTGAGAAGACAGT  1032

seq1  GCATCAGAGTAATTTACCCCTGCCTGGCCATCTTCAGTTCCTCCTGGGAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGAGTAATTTACCCCTGCCTGGCCATCTTCAGTTCCTCCTGGGAA  1082

seq1  AAATATCTTTTACTTTAAGAATGCTACAGAATTC  1133
      ||||||||||||||||||||||||||||||||||
seq2  AAATATCTTTTACTTTAAGAATGCTACAGAATTC  1116