BAC Information

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BAC

Clone NameB6Ng01-058J10
Chromosome7 (Build37)
Map Location 21,118,354 - 21,119,464
singlet/doubletsinglet
Overlap geneEG667135
Upstream geneBC024868, Gemin7, Zfp296, Sfrs16, Relb, Clptm1, Apoc2, Apoc4, Apoc1, Apoe, Tomm40, Pvrl2, Bcam, Cblc, Bcl3, Ceacam16, Ceacam19, Pvr, 2210010C17Rik, EG243872, Ceacam20, Nlrp9b, EG667040, EG667067, LOC620401, V1rd21, EG620537, LOC100043519, EG620574, LOC100043523, EG545926, LOC100043528, LOC100042964, LOC100042966, LOC100043533, EG435949, LOC100043536, LOC100042968, LOC100042971, EG667129
Downstream geneEG435946, LOC100042976, LOC100043550, LOC667156, LOC673977, LOC667166, LOC100042980, EG381936, LOC100043559, LOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013, LOC621561
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058J10.bB6Ng01-058J10.g
ACCDH880125DH880126
length1,090986
definitionDH880125|Mus musculus domesticus DNA, BAC clone: B6Ng01-058J10, 5' end.DH880126|Mus musculus domesticus DNA, BAC clone: B6Ng01-058J10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaatttacatttgagttcatttggaggagttttggaagcaaaag
cactcatgttgtttggaaatatagtgaggaatagagtcaaggcattggcc
acagccatgtggcttaaaatcacctgtctgggcctctgtttagaaccagt
caagactggagagaaattatggacaaacagaaagacattggccacagttc
caaccccaaactggcaaagcaagaggatctgaagagccacttcctcagtg
gttttcacggatttaccatgagcagacatggaaagggctttacaggaacc
tggagtgatgattaggtcagacactactctcctcgggtctctgttttatt
gtccacacttaccaattgatttgacacaatttcttcacttgataagtgag
acactattctatcgcactacaggcaaattgcctgaaaaacaatgaatgta
taataactcaaataaaattttatactgattttattactcctgcctcaatg
taaattttgtattgcaactacatctttattggttcagtaggtcaagagca
caataacacacattttaccacaccaaggtctttgcatatgaatacagaca
gtaaagagtctactatgagtctgtgattccatcatcagaattcaatacaa
ttaggagggaggaaatgcttcaattgggatgtaactaaatcaataacaaa
taaaagaatatataaatgcaacataaaaataattaattgaatttcgtata
ttatagtaacatattaaaaatagtatgtatggaaacaatatgatattgca
ctcaataataaagttatgtaactgaattcagttgtagaaaattaagttgt
tggcttttgagaaattttatactactcatcctcaaattaaaaaaaaaaac
acaaatacttctgataaagccacctgtgttgtatgacacagatgaacata
ggcttacatatgtgtcctcatatgaaaaaaacactgtacagttcatttat
tcataatttactgatcataattttgtttaatgtggaggtgcgagtcttac
ctgcatcatctgcgaattccttcaaatattaacacaatcc
gaattcctgatctttctaaaacttttttcatgaaggggtgttggattttc
tcaaatgctttcccagcatccaacgagataatcatgtggtttttgtcttt
gagtttgtttatataatggattatgttgatcgatttctgtatattaaacc
atccctgcatccctggaatgaaacctacttggtcaggatggatgattgtt
ttgatgtgttcttggattcggttagcgtgaattttattgactatttttgc
atcgatagtcataagggaaattggtctgaaattctctatctttgttgggt
ctttttgtggtttaggtatcagagtaattgtggcatcatagaatgaattg
ggttgagtaacttctgcttctattttgtggaatagtttgtgcagtactgg
aattaagtcttctttgaaggtttgatagaactctgcactaaaccctggct
aaatcctgggctgtttttggttgggagactattaatgactgcttctattt
ctttaggggatataggactgtttagatcattaacctgatcttgatttaac
tttggtacctggtatctgtctagaaatttgtccatttcatctaggttttc
cagttttgttgagtatagccttttgtagaaggatctgatggtgttttgga
tttcttcagggtctgttgttatgcctccttttcatttctgattttgttaa
ttaggatgctgtccccgtgccctctaatgaatctggctaaaggttatcta
tcttgttgatttttctgaaagtaaagctccttgtttgtgatctttgaata
gttcttcctgtttccacttggttgatttcacccctgagtttgattttttc
tgctgtctacttctttgggtgatttgcttccttttttctagagcttttag
gtgtgttgtaactgctagtgtgtgctcctccagttcttttgaaggactcg
aagctaagagtttctctttaaaatgtttccacgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_21118354_21119464
seq2: B6Ng01-058J10.b_46_1135 (reverse)

seq1  GGATTGTGTTAATAATTTTGGAGGGAATCTGCAGATGATGCAGGTAAGAC  50
      ||||||||||||||   || || |||||  ||||||||||||||||||||
seq2  GGATTGTGTTAATA---TTTGAAGGAATTCGCAGATGATGCAGGTAAGAC  47

seq1  TCTGGCACCT-CACATTTAGAACAAAAATTATGATCAGTAAAATTATGAA  99
      ||  |||||| ||||||   ||  ||||||||||||||| ||||||||||
seq2  TC--GCACCTCCACATT---AAACAAAATTATGATCAGT-AAATTATGAA  91

seq1  TAAATGGAACTTGTTAACAAGTGTTTTTTTTCATATGGAGGACACATATG  149
      ||||| |||| |||  || |||| |||||||||||| |||||||||||||
seq2  TAAAT-GAAC-TGT--AC-AGTG-TTTTTTTCATAT-GAGGACACATATG  134

seq1  TAAGCCTATGTTCATCTGTGTCATTACAACACAGGTGGCTTTATCAGAAG  199
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAAGCCTATGTTCATCTGTGTCA-TACAACACAGGTGGCTTTATCAGAAG  183

seq1  TATTTTGTGTTTTTTTTTTTTTAATTTTGAGGATGAGTAGTATAAAATTT  249
      || |||||||||||||||||   | |||||||||||||||||||||| ||
seq2  TA-TTTGTGTTTTTTTTTTT---AATTTGAGGATGAGTAGTATAAAA-TT  228

seq1  TCTCAAAAGCCAACAACTTAATTTTCTACAACTGAATTCAGTTACATAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAAGCCAACAACTTAATTTTCTACAACTGAATTCAGTTACATAAC  278

seq1  TTTATTATTGAGTGCAATATCATATTGTTTCCATACATACTATTTTTAAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATTGAGTGCAATATCATATTGTTTCCATACATACTATTTTTAAT  328

seq1  ATGTTACTATAATATACGAAATTCAATTAATTATTTTTATGTTGCATTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTACTATAATATACGAAATTCAATTAATTATTTTTATGTTGCATTTA  378

seq1  TATATTCTTTTATTTGTTATTGATTTAGTTACATCCCAATTGAAGCATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCTTTTATTTGTTATTGATTTAGTTACATCCCAATTGAAGCATTT  428

seq1  CCTCCCTCCTAATTGTATTGAATTCTGATGATGGAATCACAGACTCATAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCCTAATTGTATTGAATTCTGATGATGGAATCACAGACTCATAG  478

seq1  TAGACTCTTTACTGTCTGTATTCATATGCAAAGACCTTGGTGTGGTAAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCTTTACTGTCTGTATTCATATGCAAAGACCTTGGTGTGGTAAAA  528

seq1  TGTGTGTTATTGTGCTCTTGACCTACTGAACCAATAAAGATGTAGTTGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTATTGTGCTCTTGACCTACTGAACCAATAAAGATGTAGTTGCA  578

seq1  ATACAAAATTTACATTGAGGCAGGAGTAATAAAATCAGTATAAAATTTTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAATTTACATTGAGGCAGGAGTAATAAAATCAGTATAAAATTTTA  628

seq1  TTTGAGTTATTATACATTCATTGTTTTTCAGGCAATTTGCCTGTAGTGCG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTTATTATACATTCATTGTTTTTCAGGCAATTTGCCTGTAGTGCG  678

seq1  ATAGAATAGTGTCTCACTTATCAAGTGAAGAAATTGTGTCAAATCAATTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATAGTGTCTCACTTATCAAGTGAAGAAATTGTGTCAAATCAATTG  728

seq1  GTAAGTGTGGACAATAAAACAGAGACCCGAGGAGAGTAGTGTCTGACCTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTGTGGACAATAAAACAGAGACCCGAGGAGAGTAGTGTCTGACCTA  778

seq1  ATCATCACTCCAGGTTCCTGTAAAGCCCTTTCCATGTCTGCTCATGGTAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCACTCCAGGTTCCTGTAAAGCCCTTTCCATGTCTGCTCATGGTAA  828

seq1  ATCCGTGAAAACCACTGAGGAAGTGGCTCTTCAGATCCTCTTGCTTTGCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGTGAAAACCACTGAGGAAGTGGCTCTTCAGATCCTCTTGCTTTGCC  878

seq1  AGTTTGGGGTTGGAACTGTGGCCAATGTCTTTCTGTTTGTCCATAATTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGGGTTGGAACTGTGGCCAATGTCTTTCTGTTTGTCCATAATTTC  928

seq1  TCTCCAGTCTTGACTGGTTCTAAACAGAGGCCCAGACAGGTGATTTTAAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGTCTTGACTGGTTCTAAACAGAGGCCCAGACAGGTGATTTTAAG  978

seq1  CCACATGGCTGTGGCCAATGCCTTGACTCTATTCCTCACTATATTTCCAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGGCTGTGGCCAATGCCTTGACTCTATTCCTCACTATATTTCCAA  1028

seq1  ACAACATGAGTGCTTTTGCTTCCAAAACTCCTCCAAATGAACTCAAATGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATGAGTGCTTTTGCTTCCAAAACTCCTCCAAATGAACTCAAATGT  1078

seq1  AAATTAGAATTC  1111
      ||||||||||||
seq2  AAATTAGAATTC  1090