BAC Information

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BAC

Clone NameB6Ng01-058O06
Chromosome7 (Build37)
Map Location 21,149,605 - 21,150,261
singlet/doubletsinglet
Overlap genenone
Upstream geneGemin7, Zfp296, Sfrs16, Relb, Clptm1, Apoc2, Apoc4, Apoc1, Apoe, Tomm40, Pvrl2, Bcam, Cblc, Bcl3, Ceacam16, Ceacam19, Pvr, 2210010C17Rik, EG243872, Ceacam20, Nlrp9b, EG667040, EG667067, LOC620401, V1rd21, EG620537, LOC100043519, EG620574, LOC100043523, EG545926, LOC100043528, LOC100042964, LOC100042966, LOC100043533, EG435949, LOC100043536, LOC100042968, LOC100042971, EG667129, EG667135, EG435946
Downstream geneLOC100042976, LOC100043550, LOC667156, LOC673977, LOC667166, LOC100042980, EG381936, LOC100043559, LOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058O06.bB6Ng01-058O06.g
ACCDH880344DH880345
length1,0111,136
definitionDH880344|Mus musculus domesticus DNA, BAC clone: B6Ng01-058O06, 5' end.DH880345|Mus musculus domesticus DNA, BAC clone: B6Ng01-058O06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagaggatagataccaactacccaaataactcaattaaaaaaat
gggatacagagcttaacagagaattctcaacagaggaattttgagtagct
gcgaagtactgcaggtagagcaggggagagataagtgatatcagtgattg
aggaggtcagtccctagaatgtaccattgactcgggatgaggagaggctt
cagagcatctatgggtgactctagctgagacttcaatagtcggaaatgtg
aatcctgaagagccagcttcctgtagccaagcaaagctcccactggaagg
ataaggacaacaaactactcaaaaaacttttgccccaaaatgtaccctga
ctactatatgtatagggacaaataaagagcatagactgagggaatggcca
accaatgactgacccaaattgagacccatcccatgggcaagaaccaattc
ctaaacagtattgatattgctcagttaggcttgcagatagaaaccagcaa
acacagaagtggatgctcacagttaactattggatggatcacagggcccc
caatggaggagctagagaaagtatccaaggagctaaagagatctgcaacc
ctgtagatgcaacattatgaactaaccagtaccccggagctcttgactct
agcagcatatgtatcaaaagatggcctagtcggatgcctgacctaaagtt
ttactacagagcaattgtgataaaaactgcatggtactggtatagtgaca
gacaagtagaccaatggaatagaattgaagacccagaaatgaacccacac
atctatggtcacttgatcttcgacaagggagctacaacaatccagtggaa
ggaagacagaattttcaacaatggtgttggcacaactggttgtatcctgt
agaagatgggaatcgatccattcctatctccttgtactaaggtcaaatct
aaatggatcaacgagctcacatgaaaccagagacactaaaacttatagag
agaaagtgggg
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaacacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacatttacacaatggaatactactcagc
tattaaaaaatgaatttattaaattcctaggcaaatggatggacctggag
ggtatcatcctgagtgaagtaacccaatcacaaaggaactctcacaatat
gtactcactgataagtggatattagcccagaaacttaggatacccaagat
ataggatacaacttgccaaacgcatgaaattcaaaaagaacgaagaccaa
agtgtggacactttaccctttcttagaaatgggaacaaaacacccataga
aggagttacagagacaaaatttggagttgtgacaaaggatggaccatcta
gtgattgccatatgtagggatccatcccataatcagcttccaaatgctga
caccattgcatacactagcaagatttccctgaaaggacccagatatagct
ctctcttgtgagactatgccggggcctagaaacacagaagtggatgatca
cagtcagctattggatgggtcacacgctcctaatgagagctagagaaatt
acccaagagctaaagggaactgcaaccctataggtggacaacatatgaac
taccagtacctgggagcgcttttcttagctgcatatgtatcaaagatgct
agtcgcatcctgcaaagaaagtcatgactgcaacttttatagctctgtca
ggacgccagggccaaaaggaatggttggtaggtatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_21149605_21150261
seq2: B6Ng01-058O06.b_46_702

seq1  GAATTCAAGAGGATAGATACCAACTACCCAAATAACTCAATTAAAAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAGGATAGATACCAACTACCCAAATAACTCAATTAAAAAAAT  50

seq1  GGGATACAGAGCTTAACAGAGAATTCTCAACAGAGGAATTTTGAGTAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATACAGAGCTTAACAGAGAATTCTCAACAGAGGAATTTTGAGTAGCT  100

seq1  GCGAAGTACTGCAGGTAGAGCAGGGGAGAGATAAGTGATATCAGTGATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAAGTACTGCAGGTAGAGCAGGGGAGAGATAAGTGATATCAGTGATTG  150

seq1  AGGAGGTCAGTCCCTAGAATGTACCATTGACTCGGGATGAGGAGAGGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTCAGTCCCTAGAATGTACCATTGACTCGGGATGAGGAGAGGCTT  200

seq1  CAGAGCATCTATGGGTGACTCTAGCTGAGACTTCAATAGTCGGAAATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCATCTATGGGTGACTCTAGCTGAGACTTCAATAGTCGGAAATGTG  250

seq1  AATCCTGAAGAGCCAGCTTCCTGTAGCCAAGCAAAGCTCCCACTGGAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGAAGAGCCAGCTTCCTGTAGCCAAGCAAAGCTCCCACTGGAAGG  300

seq1  ATAAGGACAACAAACTACTCAAAAAACTTTTGCCCCAAAATGTACCCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGACAACAAACTACTCAAAAAACTTTTGCCCCAAAATGTACCCTGA  350

seq1  CTACTATATGTATAGGGACAAATAAAGAGCATAGACTGAGGGAATGGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTATATGTATAGGGACAAATAAAGAGCATAGACTGAGGGAATGGCCA  400

seq1  ACCAATGACTGACCCAAATTGAGACCCATCCCATGGGCAAGAACCAATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGACTGACCCAAATTGAGACCCATCCCATGGGCAAGAACCAATTC  450

seq1  CTAAACAGTATTGATATTGCTCAGTTAGGCTTGCAGATAGAAACCAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAGTATTGATATTGCTCAGTTAGGCTTGCAGATAGAAACCAGCAA  500

seq1  ACACAGAAGTGGATGCTCACAGTTAACTATTGGATGGATCACAGGGCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAAGTGGATGCTCACAGTTAACTATTGGATGGATCACAGGGCCCC  550

seq1  CAATGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAAGAGATCTGCAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAAGAGATCTGCAACC  600

seq1  CTGTAGATGCAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGATGCAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCT  650

seq1  AGCAGCA  657
      |||||||
seq2  AGCAGCA  657