BAC Information

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BAC

Clone NameB6Ng01-060F07
Chromosome7 (Build37)
Map Location 130,709,662 - 130,710,810
singlet/doubletsinglet
Overlap genenone
Upstream genePrkcb1, Cacng3, 4930413G21Rik, Rbbp6, LOC628696, LOC100042977, LOC100042981, Tnrc6a, Slc5a11, Arhgap17, Lcmt1, Aqp8, Zkscan2, LOC100043482
Downstream geneEG628779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060F07.bB6Ng01-060F07.g
ACCDH881332DH881333
length1,2441,143
definitionDH881332|Mus musculus domesticus DNA, BAC clone: B6Ng01-060F07, 5' end.DH881333|Mus musculus domesticus DNA, BAC clone: B6Ng01-060F07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaattatgtatcttctgtctgcatctttgaaagaaaacagcccag
ccagcctgtcaaatatctagcatgtttgcctgttggaaattgctatctcc
tcctgacacaggaaatgtctctgcagaagagaaacctattatatttcaca
tagctcacataaccccattacaaaacttgacaaagaaaaacacacaaaaa
aagaaaactacagaccaatttcaactatgaatataaatgcaaaatcccta
aataaaatataagcatatgcaatactgcagtgaaacaccagaagctggtg
cattaaaaattgaagcagaacaagtatgcctgctaagagtctaattattc
aacattgccttgaaatgtctggccaatgcaataagacaagaaacataaat
aaataaagcctgcaattattgaaaaggaagtggcaacatttctcatttgc
atatatgataatctacctgtaattcaggagaatgatccaaaaaattttac
aaagttctctcactttaaatttcatctaaagaaatattgacagagtcaaa
ggtttatgaagaaagaatctcatctcagcattatttttactaatgaaaaa
tgaaaataatcttagtctttaataaaaatattttatttttacattgcatc
attgcattgcatgaaacattcattaaatcatatgatgaaatgaacagtcc
ttaaaattattttttaaaaatatttaagtagccaacatcaaagtaaatgg
agagaagctggaagcaatcccactaaaatcagggactagacaagctgccc
actttctccctaccttttcaacatagtacttgaagtattagccagagcaa
ttcgacaacaaaaggagatcaaagggatacaaattggaaaggaggaagtc
aaaatatcactttttgcagatgatatgatagtatatataagtgaccctaa
aattccatcagagaactctaaacctgataatgccttcggtgaagtagctg
gatataaaattactcaacaagtcaatggctttctctacacaagaataaac
agctgagaaggaatagggaacaacatccttctcatagtcacaataatata
aaatatctcggcgtgacttactaagagtgagatctgatgataaacctcag
tcttgagaagataaagagatctcggaatgaagttcatgctagaatgccga
atacattggtaaaagtgctatcttgccaagagcaatctcaggat
gaattccatccctagaaatgaattcaattatgacctttatagacatgctt
gtgcaatgttcacacgcacacacacatatatacaaatgaatacatagact
attaagtgttatattaatattgatatattttaggggtttctgtttttgtt
ataaacaataactttagaagatatttaggggttggagagatggctcaatg
gttaagcccactggctgctcttctgaggacttgtgtttattcccagcact
tatgtggtggctcacaccatctgcagcttcagttccagaggatatgatgc
cctctgctggcctctgtggctactgcacacgcatgttgcatgggcataca
tgggggcaagaacacccaaacatgtgcaatgattttttaaaaaggaatgt
ttacattgcatccattggtaaatttgtgaattcttctctagaatagattc
tgaagaatgggtttgatcagaaaaaatgcttctaaattttcctatgaaat
tctaaaccatgccacagtgtcagtgaacaaggaaagaaataaaaaaaatc
aaacccaaataaaatacatcaagttaataaaaacaaaaccagaaataaac
gaaacataagaatctcaggatcaataaaagctgaagttggatttttgata
gaatgtcaagacacacaaattgtttgttagtatggttaaggcaaagggag
acacatctgggatacagaggcaatttaaaagacctggagactcatctaaa
gtcagaaagtaagacaaacattgtctgtaatggaaacatcgcaggaatgt
ctttgaaggcatgctgtggtgctgagggtggagtagatgctctgcaaacc
ttggttttctattcagcgctgactcttcatcattgctttcttaaattaga
ctaagcttctgtgagaaacacctttaagctacaaattcacctttggaggt
ggtgagctccttcaccaaggctgtgatagctggttcacattgctctatag
gacagctctctaaatggattatcaggagaaggctacaggtcttgaaaatg
ctagtctcttttctctcttaaaaaaattattaaaaatttaatggagcata
ataagttgaaattccactttaataaatggatggagatggattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_130709662_130710810
seq2: B6Ng01-060F07.g_68_1210

seq1  GAATTCCATCCCTAGAAATGAATTCAATTATGACCTTTATAGACATGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCCCTAGAAATGAATTCAATTATGACCTTTATAGACATGCTT  50

seq1  GTGCAATGTTCACACGCACACACACATATATACAAATGAATACATAGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAATGTTCACACGCACACACACATATATACAAATGAATACATAGACT  100

seq1  ATTAAGTGTTATATTAATATTGATATATTTTAGGGGTTTCTGTTTTTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTGTTATATTAATATTGATATATTTTAGGGGTTTCTGTTTTTGTT  150

seq1  ATAAACAATAACTTTAGAAGATATTTAGGGGTTGGAGAGATGGCTCAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAATAACTTTAGAAGATATTTAGGGGTTGGAGAGATGGCTCAATG  200

seq1  GTTAAGCCCACTGGCTGCTCTTCTGAGGACTTGTGTTTATTCCCAGCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGCCCACTGGCTGCTCTTCTGAGGACTTGTGTTTATTCCCAGCACT  250

seq1  TATGTGGTGGCTCACACCATCTGCAGCTTCAGTTCCAGAGGATATGATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGTGGCTCACACCATCTGCAGCTTCAGTTCCAGAGGATATGATGC  300

seq1  CCTCTGCTGGCCTCTGTGGCTACTGCACACGCATGTTGCATGGGCATACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCTGGCCTCTGTGGCTACTGCACACGCATGTTGCATGGGCATACA  350

seq1  TGGGGGCAAGAACACCCAAACATGTGCAATGATTTTTTAAAAAGGAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGCAAGAACACCCAAACATGTGCAATGATTTTTTAAAAAGGAATGT  400

seq1  TTACATTGCATCCATTGGTAAATTTGTGAATTCTTCTCTAGAATAGATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTGCATCCATTGGTAAATTTGTGAATTCTTCTCTAGAATAGATTC  450

seq1  TGAAGAATGGGTTTGATCAGAAAAAATGCTTCTAAATTTTCCTATGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAATGGGTTTGATCAGAAAAAATGCTTCTAAATTTTCCTATGAAAT  500

seq1  TCTAAACCATGCCACAGTGTCAGTGAACAAGGAAAGAAATAAAAAAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACCATGCCACAGTGTCAGTGAACAAGGAAAGAAATAAAAAAAATC  550

seq1  AAACCCAAATAAAATACATCAAGTTAATAAAAACAAAACCAGAAATAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAAATAAAATACATCAAGTTAATAAAAACAAAACCAGAAATAAAC  600

seq1  GAAACATAAGAATCTCAGGATCAATAAAAGCTGAAGTTGGATTTTTGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATAAGAATCTCAGGATCAATAAAAGCTGAAGTTGGATTTTTGATA  650

seq1  GAATGTCAAGACACACAAATTGTTTGTTAGTATGGTTAAGGCAAAGGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTCAAGACACACAAATTGTTTGTTAGTATGGTTAAGGCAAAGGGAG  700

seq1  ACACATCTGGGATACAGAGGCAATTTAAAAGACCTGGAGACTCATCTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCTGGGATACAGAGGCAATTTAAAAGACCTGGAGACTCATCTAAA  750

seq1  GTCAGAAAGTAAGACAAACATTGTCTGTAATGGAAACATCGCAGGAATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAAGTAAGACAAACATTGTCTGTAATGGAAACATCGCAGGAATGT  800

seq1  CTTTGAAGGCATGCTGT-GTGCTGAGGGTGGAGTAGATGCTCTGCAAACC  849
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTTTGAAGGCATGCTGTGGTGCTGAGGGTGGAGTAGATGCTCTGCAAACC  850

seq1  TTGG-TTTCTATTCAGCGCTGACTC-TCATCATTGCTTTC-TAAATTAGA  896
      |||| |||||||||||||||||||| |||||||||||||| |||||||||
seq2  TTGGTTTTCTATTCAGCGCTGACTCTTCATCATTGCTTTCTTAAATTAGA  900

seq1  C-CAGCTTCTGTGAGAAACACCTTTAAGCTACAAATTCACCTTT-GAGGT  944
      |  ||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTAAGCTTCTGTGAGAAACACCTTTAAGCTACAAATTCACCTTTGGAGGT  950

seq1  GGTGAGCTCC-TCACCAAGGCTGTGATTAGCTGGTTCACATTGCTCTTAT  993
      |||||||||| ||||||||||||||| ||||||||||||||||||| |||
seq2  GGTGAGCTCCTTCACCAAGGCTGTGA-TAGCTGGTTCACATTGCTC-TAT  998

seq1  GAGGACCAGCCTCTCTAATTGGAATATCAGGAGGGATGGCCTACAGG-CT  1042
       |||| ||| |||||||| |||| ||||||||  || || ||||||| ||
seq2  -AGGA-CAG-CTCTCTAAATGGATTATCAGGA--GAAGG-CTACAGGTCT  1042

seq1  TGAAAATGCTAGTCTCCCTTTCTCCTTTAAAAAATATATATAAAAAATTT  1092
      ||||||||||||||| | ||||||  |||||||| || ||| ||||||||
seq2  TGAAAATGCTAGTCT-CTTTTCTCTCTTAAAAAA-AT-TATTAAAAATTT  1089

seq1  AATGGAGCATATATAGTTGAAAATCCACATATAATAAATGTATGGATGAT  1142
      |||||||||||   |||||||| ||||| | ||||||||| ||||| |||
seq2  AATGGAGCATAATAAGTTGAAATTCCAC-TTTAATAAATGGATGGA-GAT  1137

seq1  GTGATTC  1149
      | |||||
seq2  G-GATTC  1143