BAC Information

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BAC

Clone NameB6Ng01-060G03
Chromosome7 (Build37)
Map Location 51,142,753 - 51,300,151
singlet/doubletdoublet
Overlap geneKlk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps
Upstream geneLOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4
Downstream geneKlk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854, EG638453, Clec11a, Shank1, 1700008O03Rik, Syt3, Lrrc4b, 0610012D14Rik, Josd2, 2310044H10Rik, 1700021P22Rik, Mybpc2, Spib, Pold1, Nr1h2, Napsa, Kcnc3, Myh14, 1700023D19Rik, Zfp473, Vrk3, EG628904, Atf5, Nup62, Il4i1, Tbc1d17, Akt1s1, Pnkp, Ptov1, Med25, Fuz, Ap2a1, Stk22s1, Cpt1c, Prmt1, Bcl2l12, Irf3, AI480556, Rras, Prr12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060G03.bB6Ng01-060G03.g
ACCDH881370DH881371
length842831
definitionDH881370|Mus musculus domesticus DNA, BAC clone: B6Ng01-060G03, 5' end.DH881371|Mus musculus domesticus DNA, BAC clone: B6Ng01-060G03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,299,312 - 51,300,151)(51,142,753 - 51,143,573)
sequence
gaattctggaaggtgaggtgtcagaaaactggatttcaatgaaaaaatga
atccaggaaagggtgcttggggttgattttgggtttcttggattgggcat
gaagtggcagctgggatggagagaatgagggtgtccagagcaaaggggca
gcagggtcaaggccagggcgtgggctcattttaggatctgtggtagagat
gacatctaagaggggtggggctccctaagaaagaagtttgagatgggaca
agcagtgaaagaaggaaattctgggtgtctgtgacagaaaggcactgctt
actgtggaggtagtcaagtgatctgggtattggagaggctcagggttctc
ttggaggaagccccaagacaggagtggaaacatagttggagcaagttagg
ccactgtgaagcagagatgaagacacacttatgtgaggtactagggttag
gcattggggacttttggtgtttcatgccagagtgggtactagagctgtgc
aatggggctctggagagaggagacaggagcctcaggctcagggagggagg
gatgagggggaagagcaggacaaggcacagcattggaaacaggaaatctt
ggcaagccatgcatagatagacacacttctctgtaacacagcaggctgcg
gcagaggggattgccatggatgaagacaagtctgggctatttcatgagac
actaactcataacttttttcaagatatgggcaggagatggcttggttcct
acatgattgggcatgcaagcataaggacctgagctaaacctccagatcac
aggaaaaatttagtgtgatctatggatgataacccacatctg
gaattctcctgtctctacctcccatctcaccatacaagtgctgggattac
agttgcagacactattttgtctagctttcatgtgggtgctggggaccatc
aatggttgcacagcaagtgatttacagggggggcatctttccagccctct
agcagattcttgcacatgcatctgcttgatggttatcactttcacctcca
gttatttaccggagatctgtggggaaaactaaaaatagaagccctgctta
ggaatggggaaggcaactaagtagagtgcttaccttccaggcatggagcc
ctgggtcccatcaccacactgtataagctgggcgtgctggaataagccca
taactccagtacttgggaggcagaggtagcaggatcaggagttcaagaca
gtcctcagttacttgcctagtttaatgccagtctgggctgtgtgagaccc
tgttgtcccttccccttatcacacaaatgttttacttagaaatcaggttg
gaaatagctcaagtgtgtgcagttagtgaatgacatagggacctgggatg
aaatggatcatgcagtgagtaacggaaagaaaatggatggcatgagcagt
ggtttgcttacatatgaaaacccttttgtaccaggaagccatacacggac
tgctatataaggtatgaatccatcatgaactcgtgtgtgtgtgtgtgtgt
gtgtgtggccagctagaaaaaaggcatcagatgcccagagctacagtagc
aggtgggttgtagcagccttggtgtgggttgctgagagcccaactggggt
tctctgcaagagctgtaccggtttttaacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_51299312_51300151
seq2: B6Ng01-060G03.b_48_882 (reverse)

seq1  GGGTTATCATCACATAGCATCACACCTGACGTTTTCCCTGTGTTCTGGAG  50
      ||||||||||| ||||| |||||||   |  |||| |||||| |||||| 
seq2  GGGTTATCATC-CATAG-ATCACAC--TAAATTTTTCCTGTGATCTGGA-  45

seq1  GGTTCAGCTCAGGTCCTAATGCTTGCATGGCCAATCCTGTAGGAACCAAG  100
      |||| |||||||||||| ||||||||||| |||||| |||||||||||||
seq2  GGTTTAGCTCAGGTCCTTATGCTTGCATGCCCAATCATGTAGGAACCAAG  95

seq1  CCATCTCCTGCCCATCTCTTGGAAATAAGTTCTGAGTTAGTGTCTCATGA  150
      ||||||||||||||| |||| |||| ||||| ||||||||||||||||||
seq2  CCATCTCCTGCCCATATCTT-GAAAAAAGTTATGAGTTAGTGTCTCATGA  144

seq1  TATAGCCCAGGCTTGTCTTCATCCATGGCAAT-CCCTCTGCCGCAGCCTG  199
       ||||||||| ||||||||||||||||||||| |||||||||||||||||
seq2  AATAGCCCAGACTTGTCTTCATCCATGGCAATCCCCTCTGCCGCAGCCTG  194

seq1  CTGTGTTACAGAGAAGTGTGTCTATCTATGCATGGCTTGCCAAGATTTCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTACAGAGAAGTGTGTCTATCTATGCATGGCTTGCCAAGATTTCC  244

seq1  TGTTTCCAATGCTGTGCCTTGTCCTGCTCTTCCCCCTCATCCCTCCCTCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCAATGCTGTGCCTTGTCCTGCTCTTCCCCCTCATCCCTCCCTCC  294

seq1  CTGAGCCTGAGGCTCCTGTCTCCTCTCTCCAGAGCCCCATTGCACAGCTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCTGAGGCTCCTGTCTCCTCTCTCCAGAGCCCCATTGCACAGCTC  344

seq1  TAGTACCCACTCTGGCATGAAACACCAAAAGTCCCCAATGCCTAACCCTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACCCACTCTGGCATGAAACACCAAAAGTCCCCAATGCCTAACCCTA  394

seq1  GTACCTCACATAAGTGTGTCTTCATCTCTGCTTCACAGTGGCCTAACTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTCACATAAGTGTGTCTTCATCTCTGCTTCACAGTGGCCTAACTTG  444

seq1  CTCCAACTATGTTTCCACTCCTGTCTTGGGGCTTCCTCCAAGAGAACCCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACTATGTTTCCACTCCTGTCTTGGGGCTTCCTCCAAGAGAACCCT  494

seq1  GAGCCTCTCCAATACCCAGATCACTTGACTACCTCCACAGTAAGCAGTGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTCTCCAATACCCAGATCACTTGACTACCTCCACAGTAAGCAGTGC  544

seq1  CTTTCTGTCACAGACACCCAGAATTTCCTTCTTTCACTGCTTGTCCCATC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTCACAGACACCCAGAATTTCCTTCTTTCACTGCTTGTCCCATC  594

seq1  TCAAACTTCTTTCTTAGGGAGCCCCACCCCTCTTAGATGTCATCTCTACC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTTCTTTCTTAGGGAGCCCCACCCCTCTTAGATGTCATCTCTACC  644

seq1  ACAGATCCTAAAATGAGCCCACGCCCTGGCCTTGACCCTGCTGCCCCTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCCTAAAATGAGCCCACGCCCTGGCCTTGACCCTGCTGCCCCTTT  694

seq1  GCTCTGGACACCCTCATTCTCTCCATCCCAGCTGCCACTTCATGCCCAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGACACCCTCATTCTCTCCATCCCAGCTGCCACTTCATGCCCAAT  744

seq1  CCAAGAAACCCAAAATCAACCCCAAGCACCCTTTCCTGGATTCATTTTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAACCCAAAATCAACCCCAAGCACCCTTTCCTGGATTCATTTTTT  794

seq1  CATTGAAATCCAGTTTTCTGACACCTCACCTTCCAGAATTC  840
      |||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAAATCCAGTTTTCTGACACCTCACCTTCCAGAATTC  835

seq1: chr7_51142753_51143573
seq2: B6Ng01-060G03.g_69_892

seq1  GAATTCTCCTGTCTCTACCTCCCATCTCACCATACAAGTGCTGGGATTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGTCTCTACCTCCCATCTCACCATACAAGTGCTGGGATTAC  50

seq1  AGTTGCAGACACTATTTTGTCTAGCTTTCATGTGGGTGCTGGGGACCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCAGACACTATTTTGTCTAGCTTTCATGTGGGTGCTGGGGACCATC  100

seq1  AATGGTTGCACAGCAAGTGATTTACAGGGGGGGCATCTTTCCAGCCCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTGCACAGCAAGTGATTTACAGGGGGGGCATCTTTCCAGCCCTCT  150

seq1  AGCAGATTCTTGCACATGCATCTGCTTGATGGTTATCACTTTCACCTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATTCTTGCACATGCATCTGCTTGATGGTTATCACTTTCACCTCCA  200

seq1  GTTATTTACCGGAGATCTGTGGGGAAAACTAAAAATAGAAGCCCTGCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTACCGGAGATCTGTGGGGAAAACTAAAAATAGAAGCCCTGCTTA  250

seq1  GGAATGGGGAAGGCAACTAAGTAGAGTGCTTACCTTCCAGGCATGGAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGGGGAAGGCAACTAAGTAGAGTGCTTACCTTCCAGGCATGGAGCC  300

seq1  CTGGGTCCCATCACCACACTGTATAAGCTGGGCGTGCTGGAATAAGCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTCCCATCACCACACTGTATAAGCTGGGCGTGCTGGAATAAGCCCA  350

seq1  TAACTCCAGTACTTGGGAGGCAGAGGTAGCAGGATCAGGAGTTCAAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCCAGTACTTGGGAGGCAGAGGTAGCAGGATCAGGAGTTCAAGACA  400

seq1  GTCCTCAGTTACTTGCCTAGTTTAATGCCAGTCTGGGCTGTGTGAGACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCAGTTACTTGCCTAGTTTAATGCCAGTCTGGGCTGTGTGAGACCC  450

seq1  TGTTGTCCCTTCCCCTTATCACACAAATGTTTTACTTAGAAATCAGGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCCCTTCCCCTTATCACACAAATGTTTTACTTAGAAATCAGGTTG  500

seq1  GAAATAGCTCAAGTGTGTGCAGTTAGTGAATGACATAGGGACCTGGGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGCTCAAGTGTGTGCAGTTAGTGAATGACATAGGGACCTGGGATG  550

seq1  AAATGGATCATGCAGTGAGTAACGGAAAGAAAATGGATGGCATGAGCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGATCATGCAGTGAGTAACGGAAAGAAAATGGATGGCATGAGCAGT  600

seq1  GGTTTGCTTACATATGAAAACCCTTTTGTACCAGGAAGCCATACACGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGCTTACATATGAAAACCCTTTTGTACCAGGAAGCCATACACGGAC  650

seq1  TGCTATATAAGGTATGAATCCATCATGAACTCGTGTGTGTGTGTGTGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATATAAGGTATGAATCCATCATGAACTCGTGTGTGTGTGTGTGTGT  700

seq1  GTGTGTGGCCAGCTAG-AAAAAGGCATCAGATGCCCAGAGCTACAGTAGC  749
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTGTGTGGCCAGCTAGAAAAAAGGCATCAGATGCCCAGAGCTACAGTAGC  750

seq1  AGGT-GGTTGTAAGCAGCC-TGGTGTGGG-TGCTGAGAGCCCAACTTGGG  796
      |||| |||||| ||||||| ||||||||| |||||||||||||||| |||
seq2  AGGTGGGTTGT-AGCAGCCTTGGTGTGGGTTGCTGAGAGCCCAACTGGGG  799

seq1  TTCTCTGCAAGAGCTGTACCTGTTT  821
      |||||||||||||||||||| ||||
seq2  TTCTCTGCAAGAGCTGTACCGGTTT  824