BAC Information

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BAC

Clone NameB6Ng01-061D23
Chromosome7 (Build37)
Map Location 125,919,194 - 126,035,586
singlet/doubletdoublet
Overlap gene9030624J02Rik, 2310008H09Rik, Iqck
Upstream geneLOC669758, Rps15a, Arl6ip1, 2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5, Mir16, 6330503K22Rik
Downstream geneGprc5b, Gpr139, LOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390, Thumpd1, EG434233, Acsm3, Exod1, 2610020H08Rik, Dcun1d3, LOC100043399
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061D23.bB6Ng01-061D23.g
ACCDH881978DH881979
length641598
definitionDH881978|Mus musculus domesticus DNA, BAC clone: B6Ng01-061D23, 5' end.DH881979|Mus musculus domesticus DNA, BAC clone: B6Ng01-061D23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,034,939 - 126,035,586)(125,919,194 - 125,919,792)
sequence
gaattctcacccatacactgctatataaagcaattgggatctctggactt
taaaaaggaagagactaaggtttaggaagatcaaggtcacaatgctttca
ggtctgaagtcacaaattctaccgctctcatagcagctgcgcctctaaca
acaggacaggtcacagctagacagctagcacatttgtacccccaacaccg
agcctgctgcacagaccctgtctaaataaaacccaatggatcccactctt
ctcttttttccccgaatggcttccactattcagacgtaagtattcaaaag
aggatctgaggagagtggacggcccgagggccaatctgttgctttgctaa
aaggccaggcagacaaattaccttccaaatatttgtatcatagatggtgc
tgctcttgactttggtcagaggaatttctttttggatttcttttaatggt
tagtgcatggactctttaccagcccaagtgctgactctaagtaactgagt
tgtcaactgcagtgagtcatctctatcaactgcccaggtgcagggaacat
gaggaaaagagtttagaaagaatgccagagccaagggatggggaggagag
ctgtgcaggctgcaaccggatggctataaccatcaactcac
gaattctttggctttagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgcgcgtgtgtgcgcacgcgcgcacatgtgtgtctgtgactctgtgtct
ctgtttctatgtctgtgtgtgtgtgtatcttcatcttcttgttaaagagt
tgggctgggtgtgagctggccaaggcctgggagggagagctgtttctgtg
acccacacaggcttaagctgctgtggtgaatgggaaacaactggggcccc
ttatcctcactctgaagtaacacaacttggcgcttttacttcattcaatt
gttggtttctggcgaatgcatccaatggagccacacaggggtttcagctc
tcacaggcctcccagaaagtgggtcttctgcccttaccctgtcagccttg
ttcacctttagagaggcttctggccactgctaagtcacaagcttccttga
ggacaaaagcacagattgagccttgtacaggagccatgctgctcgatagt
aagtcagagccttgctctgcttctcttgtgcaatacaactgaaaaaaatt
tgttgtagagagtcacaagattgcctagcaagtgctctgtatgggtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_126034939_126035586
seq2: B6Ng01-061D23.b_47_687 (reverse)

seq1  GTGAGTTGATAGGCTAATAGCCATGCCGGTTTGCAGCCTTGCACAGCTCT  50
      ||||||||||  | | |||||||| |||| |||||||| |||||||||||
seq2  GTGAGTTGAT--GGTTATAGCCAT-CCGG-TTGCAGCC-TGCACAGCTCT  45

seq1  CCTCCCCATCCCTTGGCTCTGGCATTCTTTCTAAACTCTTTTCCTCCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCTCCCCATCCCTTGGCTCTGGCATTCTTTCTAAACTCTTTTCCT-CATG  94

seq1  TTCCCTGCACCTTGGGCAGTTGATAGAGATGACTCACTGCAGTTGACAAC  150
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGCACC-TGGGCAGTTGATAGAGATGACTCACTGCAGTTGACAAC  143

seq1  TCAGTTACTTAGAGTCAGCACTTGGGCTGGTAAAGAGTCCATGCACTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTACTTAGAGTCAGCACTTGGGCTGGTAAAGAGTCCATGCACTAAC  193

seq1  CATTAAAAGAAATCCAAAAAGAAATTCCTCTGACCAAAGTCAAGAGCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAAGAAATCCAAAAAGAAATTCCTCTGACCAAAGTCAAGAGCAGC  243

seq1  ACCATCTATGATACAAATATTTGGAAGGTAATTTGTCTGCCTGGCCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTATGATACAAATATTTGGAAGGTAATTTGTCTGCCTGGCCTTTT  293

seq1  AGCAAAGCAACAGATTGGCCCTCGGGCCGTCCACTCTCCTCAGATCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGCAACAGATTGGCCCTCGGGCCGTCCACTCTCCTCAGATCCTCT  343

seq1  TTTGAATACTTACGTCTGAATAGTGGAAGCCATTCGGGGAAAAAAGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATACTTACGTCTGAATAGTGGAAGCCATTCGGGGAAAAAAGAGAA  393

seq1  GAGTGGGATCCATTGGGTTTTATTTAGACAGGGTCTGTGCAGCAGGCTCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGATCCATTGGGTTTTATTTAGACAGGGTCTGTGCAGCAGGCTCG  443

seq1  GTGTTGGGGGTACAAATGTGCTAGCTGTCTAGCTGTGACCTGTCCTGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGGGGGTACAAATGTGCTAGCTGTCTAGCTGTGACCTGTCCTGTTG  493

seq1  TTAGAGGCGCAGCTGCTATGAGAGCGGTAGAATTTGTGACTTCAGACCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGGCGCAGCTGCTATGAGAGCGGTAGAATTTGTGACTTCAGACCTG  543

seq1  AAAGCATTGTGACCTTGATCTTCCTAAACCTTAGTCTCTTCCTTTTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATTGTGACCTTGATCTTCCTAAACCTTAGTCTCTTCCTTTTTAAA  593

seq1  GTCCAGAGATCCCAATTGCTTTATATAGCAGTGTATGGGTGAGAATTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGAGATCCCAATTGCTTTATATAGCAGTGTATGGGTGAGAATTC  641

seq1: chr7_125919194_125919792
seq2: B6Ng01-061D23.g_69_666

seq1  GAATTCTTTGGCTTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGCTTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  50

seq1  GTGCGCGTGTGTGCGCACGCGCGCACATGTGTGTCTGTGACTCTGTGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGCGTGTGTGCGCACGCGCGCACATGTGTGTCTGTGACTCTGTGTCT  100

seq1  CTGTTTCTATGTCTGTGTGTGTGTGTATCTTCATCTTCTTGTTAAAGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCTATGTCTGTGTGTGTGTGTATCTTCATCTTCTTGTTAAAGAGT  150

seq1  TGGGCTGGGTGTGAGCTGGCCAAGGCCTGGGAGGGAGAGCTGTCTCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGGGCTGGGTGTGAGCTGGCCAAGGCCTGGGAGGGAGAGCTGTTTCTGTG  200

seq1  ACCCACACAGGCTTAGGCTGCTGTGGTGAATGGGAGACAACTGGGGCCCC  250
      ||||||||||||||| ||||||||||||||||||| ||||||||||||||
seq2  ACCCACACAGGCTTAAGCTGCTGTGGTGAATGGGAAACAACTGGGGCCCC  250

seq1  TTAGCCTCACTCTGAAGTAGCACAGCTTGGCGCTTTTACTTCATTCAGTT  300
      ||| ||||||||||||||| |||| |||||||||||||||||||||| ||
seq2  TTATCCTCACTCTGAAGTAACACAACTTGGCGCTTTTACTTCATTCAATT  300

seq1  GTTGGTTTCTGGCGAATGCATCCCATGGAGCCACACAGGGGTTTCAGCTC  350
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTTGGTTTCTGGCGAATGCATCCAATGGAGCCACACAGGGGTTTCAGCTC  350

seq1  TCACAGGCCTCCCAGACAGTGGGTCTTCTGCCCTTGCCCCGTCAGCCTTG  400
      |||||||||||||||| |||||||||||||||||| ||| ||||||||||
seq2  TCACAGGCCTCCCAGAAAGTGGGTCTTCTGCCCTTACCCTGTCAGCCTTG  400

seq1  TGCACCTTTGGTGAGGCTTCTGGCCTCTGCTAAGTCACAGGCTTCCTTGA  450
      | ||||||| | ||||||||||||| ||||||||||||| ||||||||||
seq2  TTCACCTTTAGAGAGGCTTCTGGCCACTGCTAAGTCACAAGCTTCCTTGA  450

seq1  GGACAGAAGCACAGATGGAGCCTTGTACAGGAGCCATGCTGCTCGTTAGT  500
      ||||| |||||||||| |||||||||||||||||||||||||||| ||||
seq2  GGACAAAAGCACAGATTGAGCCTTGTACAGGAGCCATGCTGCTCGATAGT  500

seq1  AAGCCAGGGCCTTCGCTCTGCTTCTCTTGTGCCATACAACTGAGGAAGGC  550
      ||| ||| ||||| |||||||||||||||||| ||||||||||  ||   
seq2  AAGTCAGAGCCTT-GCTCTGCTTCTCTTGTGCAATACAACTGA-AAAAAA  548

seq1  TCTGTGGCTGAGAGTCACCAGATTGCCTAGCAGGCGCTCTGTA-GGGTCA  599
      | ||| |  ||||||||| ||||||||||||| | |||||||| ||||||
seq2  TTTGTTGTAGAGAGTCACAAGATTGCCTAGCAAGTGCTCTGTATGGGTCA  598