BAC Information

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BAC

Clone NameB6Ng01-061I06
Chromosome7 (Build37)
Map Location 98,900,574 - 99,062,108
singlet/doubletdoublet
Overlap geneDlg2
Upstream geneLOC666689, LOC621816, LOC100039943
Downstream geneCcdc90b, Ankrd42, Pcf11, LOC676240, LOC100040007, 4632427E13Rik, Rab30, 4632434I11Rik, Prcp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061I06.bB6Ng01-061I06.g
ACCDH882172DH882173
length1,1591,128
definitionDH882172|Mus musculus domesticus DNA, BAC clone: B6Ng01-061I06, 5' end.DH882173|Mus musculus domesticus DNA, BAC clone: B6Ng01-061I06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,900,574 - 98,901,749)(99,060,968 - 99,062,108)
sequence
gaattcaataatgacattgtggaatagatcataaaaccctaaatgatgtt
taaatatgtagtctctttacccggtgtgactctggaaagctacttgaagg
agattgcttaattcattgaatacactctttttaggcaatagagcaagctt
tgtccctgtctaacttggtaactgacttagtcttgctaacacagccatcc
atgcaaagaacacgctctaggttcagacatgttcaagttactaaaataac
ccccaagggctgttcttctgtcatgtgtcaccatttatgagttgtaattg
ggttaattaagaagggaagcatagatggagcttgagcagcatagcttaag
ggttcctaatgttgcaaacagaaacttacatgttaaataatggctgaaag
tgtgtctagctttgacctttaggtactgctcataacctgaggtctaaatg
tcatgaagaacagtaaaacatcaagctcctctcagacccaagtgttcaag
aaactttccccatgccccaccctctaaactgcctgtgtctataggcccat
ttcaccatctttatatgtacttcaagtttatttgatagcttagtttagca
tataccttctttgatacagaaatgaactggttccattaagatgaactatc
atatcacgacagagagcacaggtttgacacccagtagaactggctgttgg
attgagaagcagtagtgttgccttatgactagaatgaatttgagaagtta
tttaaacttcctgagccttaatttctcatttgataaaatgtgggaaaagt
acaactaatgcataatgctgatatgagaatggcccaacttcattcatggg
ttgacagaaaggtttgaacaataggtattttctttttttaccattcacat
tttgcatatgtcatctcttaaatcccaacaataagtcacaagaagtatga
ctgtagtctccactcgtaaagtgaaaatctcaagcaagaatactaacttg
ctcacatcgacactgagggcatgcagcagaatagcattattctacttgat
ttctattttcttgtttcttagagagggggaaagggtgactttgatagcag
ctagttgtcattatcctcactagaagattggtaacttcaagcggggtggg
ggagccttc
gaattctcttaaaagttttaagagaaagttccaagagaaaattcccgtta
aaagttttaaaagttgtaaattacagtaatgagggcctgcaccaactaag
ttaatcagagaagtaggcatgattcctccttgagtagagtacagtgtctt
tgacgaatgaatagagactaatttctaagtgctggagggaaattttagaa
gggagcgattcagtttcatgaacctattggtgggctgccaaacactctac
tgtcatattcggtttctaagtattcatccaaaatataccctcctgaagtc
tcatctaatcgggccactgggaaattatcactgccagacgtgctgaaacc
attttgaacactctgttcagtaacgagctggggcaggagtgtggatgaca
tacaatcaagtagagggttatactgctgagttatttaaagcagcaggagg
gcccatggaacaggagataatctttcattagcaaagaagaatatagtacc
tcaacacgctagctttctaataagcaaataagagaactgttagtttcagt
ctgcatctagggaaagatactatgaaaaatcacgtgcattttattgtaag
ataacttctctgcagtggctctctctgcacaccgctgcatcacacaatca
tcagatcaaagagaaaacacctgccagagaaaggcaagccaaagaagaaa
tcagggaaagttcccgaagacagaattcataatggaagacttcggtttga
gtgcctagaagaactgcaacgctgatcatctttagtttacagttcaggat
gcttatgtagaatactgatttaaatttgaaaaattatcatggaaaagtca
ctgaaagtgtatacacttaaatactcacagttacaagagagggtggcgcc
ttctgtgtgtttcctgtcctcagtaccttttcccagctgctgatggcatc
tctttacatatacctagatataatctagtaggagtttgctgagtgaatag
ttgatccatgtagctcttcttttctaacatcatcatgtggggtgtgtgta
aaacacttatttaacttttttctcaaaacagtttagttttaagggttagt
gctcatcccctcatatgatgatatgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_98900574_98901749
seq2: B6Ng01-061I06.b_32_1190

seq1  GAATTCAATAATGACATTGTGGAATAGATCATAAAACCCTAAATGATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAATGACATTGTGGAATAGATCATAAAACCCTAAATGATGTT  50

seq1  TAAATATGTAGTCTCTTTACCCGGTGTGACTCTGGAAAGCTACTTGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATGTAGTCTCTTTACCCGGTGTGACTCTGGAAAGCTACTTGAAGG  100

seq1  AGATTGCTTAATTCATTGAATACACTCTTTTTAGGCAATAGAGCAAGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGCTTAATTCATTGAATACACTCTTTTTAGGCAATAGAGCAAGCTT  150

seq1  TGTCCCTGTCTAACTTGGTAACTGACTTAGTCTTGCTAACACAGCCATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTGTCTAACTTGGTAACTGACTTAGTCTTGCTAACACAGCCATCC  200

seq1  ATGCAAAGAACACGCTCTAGGTTCAGACATGTTCAAGTTACTAAAATAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAAGAACACGCTCTAGGTTCAGACATGTTCAAGTTACTAAAATAAC  250

seq1  CCCCAAGGGCTGTTCTTCTGTCATGTGTCACCATTTATGAGTTGTAATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGGGCTGTTCTTCTGTCATGTGTCACCATTTATGAGTTGTAATTG  300

seq1  GGTTAATTAAGAAGGGAAGCATAGATGGAGCTTGAGCAGCATAGCTTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAATTAAGAAGGGAAGCATAGATGGAGCTTGAGCAGCATAGCTTAAG  350

seq1  GGTTCCTAATGTTGCAAACAGAAACTTACATGTTAAATAATGGCTGAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCTAATGTTGCAAACAGAAACTTACATGTTAAATAATGGCTGAAAG  400

seq1  TGTGTCTAGCTTTGACCTTTAGGTACTGCTCATAACCTGAGGTCTAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTAGCTTTGACCTTTAGGTACTGCTCATAACCTGAGGTCTAAATG  450

seq1  TCATGAAGAACAGTAAAACATCAAGCTCCTCTCAGACCCAAGTGTTCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAAGAACAGTAAAACATCAAGCTCCTCTCAGACCCAAGTGTTCAAG  500

seq1  AAACTTTCCCCATGCCCCACCCTCTAAACTGCCTGTGTCTATAGGCCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTCCCCATGCCCCACCCTCTAAACTGCCTGTGTCTATAGGCCCAT  550

seq1  TTCACCATCTTTATATGTACTTCAAGTTTATTTGATAGCTTAGTTTAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCATCTTTATATGTACTTCAAGTTTATTTGATAGCTTAGTTTAGCA  600

seq1  TATACCTTCTTTGATACAGAAATGAACTGGTTCCATTAAGATGAACTATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCTTCTTTGATACAGAAATGAACTGGTTCCATTAAGATGAACTATC  650

seq1  ATATCACGACAGAGAGCACAGGTTTGACACCCAGTAGAACTGGCTGTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACGACAGAGAGCACAGGTTTGACACCCAGTAGAACTGGCTGTTGG  700

seq1  ATTGAGAAGCAGTAGTGTTGCCTTATGACTAGAATGAATTTGAGAAGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAAGCAGTAGTGTTGCCTTATGACTAGAATGAATTTGAGAAGTTA  750

seq1  TTTAAACTTCCTGAGCCTTAATTTCTCATTTGATAAAATGT-GGAAAAGT  799
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTTAAACTTCCTGAGCCTTAATTTCTCATTTGATAAAATGTGGGAAAAGT  800

seq1  ACAACTAATGCATAATGCTGATATGAGAATGGCCCAACTTCATTCATGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACAACTAATGCATAATGCTGATATGAGAATGGCCCAACTTCATTCATGGG  850

seq1  TTGACAGAAAGGTTTGAACAATAGGTTATTTTCTTTTTTTACCATTCAAC  899
      ||||||||||||||||||||||||| ||||||||||||||||||||| ||
seq2  TTGACAGAAAGGTTTGAACAATAGG-TATTTTCTTTTTTTACCATTC-AC  898

seq1  ATTTTGCATATGTCAATCTCTTAAATCCCAACAATAAGTCACAAGAAGTA  949
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATTTTGCATATGTC-ATCTCTTAAATCCCAACAATAAGTCACAAGAAGTA  947

seq1  TGACTGTAGTCTCCACTCGTAAAGTGAAAAATCTCAAGCAAAGAAATAAC  999
      |||||||||||||||||||||||||| |||||||||||| |||||   ||
seq2  TGACTGTAGTCTCCACTCGTAAAGTG-AAAATCTCAAGC-AAGAA--TAC  993

seq1  TAACCTGCTCACATCAGACACTGAGGGCATGCAGCAGAAATAGCATTATT  1049
      |||| |||||||||| ||||||||||||||||||||| ||||||||||||
seq2  TAACTTGCTCACATC-GACACTGAGGGCATGCAGCAG-AATAGCATTATT  1041

seq1  CTAC-TGA-TGCTATTTTCTGAGTTCCTTAGAGATGGGGAAAAGGGTGAC  1097
      |||| ||| | |||||||||  ||| |||||||| |||| ||||||||||
seq2  CTACTTGATTTCTATTTTCT-TGTTTCTTAGAGA-GGGGGAAAGGGTGAC  1089

seq1  ATTTGATAGCAGCTAAGGTTGTCATATACCTCACTAAGAAAAGATGGGAA  1147
       ||||||||||||||  ||||||||   |||||||   | ||||| ||  
seq2  -TTTGATAGCAGCTA--GTTGTCATTATCCTCACT---AGAAGATTGG-T  1132

seq1  AACTACAAAAGTGGGTGGGGGAGCTCTTC  1176
      |||| |||  | |||||||||||| ||||
seq2  AACTTCAAGCG-GGGTGGGGGAGC-CTTC  1159

seq1: chr7_99060968_99062108
seq2: B6Ng01-061I06.g_69_1196 (reverse)

seq1  AAACATAATCAGTCATATGAAGTGAATGAGCACTAACACTTATAAAAACT  50
      |||||| |||| ||||||| || | |||||||||||| |||   ||||||
seq2  AAACAT-ATCA-TCATATG-AGGGGATGAGCACTAACCCTT---AAAACT  44

seq1  AAAACTGTTTTTGAGAAAAAAGTTGAAATAAGTGTTTTTACACACA-CAC  99
       |||||| |||||||||||||||| ||||||||| ||||||||||| | |
seq2  -AAACTG-TTTTGAGAAAAAAGTT-AAATAAGTG-TTTTACACACACCCC  90

seq1  ACATGATGTATGTTTAGGAAAAGAAGAGCTACATGGATTCAACTTATTTC  149
      |||||||| |||||   |||||||||||||||||||| ||||||   |||
seq2  ACATGATG-ATGTT--AGAAAAGAAGAGCTACATGGA-TCAACT--ATTC  134

seq1  ACTCAGCAAACTCCTACTAGATTATATCTAGGTATATGTAGAGAGATGCC  199
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACTCAGCAAACTCCTACTAGATTATATCTAGGTATATGTAAAGAGATGCC  184

seq1  ATCAGCAGCTGGG-AAAGGTACTGAGGACAGGAAACACACAG-AGGCGCC  247
      ||||||||||||| |||||||||||||||||||||||||||| |||||||
seq2  ATCAGCAGCTGGGAAAAGGTACTGAGGACAGGAAACACACAGAAGGCGCC  234

seq1  ACCCTCTCTTGTAACTGTGAGTATTTAAGTGTATACACTTTCAGTGACTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCTCTTGTAACTGTGAGTATTTAAGTGTATACACTTTCAGTGACTT  284

seq1  TTCCATGATAATTTTTCAAATTTAAATCAGTATTCTACATAAGCATCCTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGATAATTTTTCAAATTTAAATCAGTATTCTACATAAGCATCCTG  334

seq1  AACTGTTAACTAAAGATGATCAGCGTTGCAGTTCTTCTAGGCACTCAAAC  397
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAAACTAAAGATGATCAGCGTTGCAGTTCTTCTAGGCACTCAAAC  384

seq1  CGAAGTCTTCCATTATGAATTCTGTCTTCGGGAACTTTCCCTGATTTCTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGTCTTCCATTATGAATTCTGTCTTCGGGAACTTTCCCTGATTTCTT  434

seq1  CTTTGGCTTGCCTTTCTCTGGCAGGTGTTTTCTCTTTGATCTGATGATTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCTTGCCTTTCTCTGGCAGGTGTTTTCTCTTTGATCTGATGATTG  484

seq1  TGTGATGCAGCGGTGTGCAGAGAGAGCCACTGCAGAGAAGTTATCTTACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGCAGCGGTGTGCAGAGAGAGCCACTGCAGAGAAGTTATCTTACA  534

seq1  ATAAAATGCACGTGATTTTTCATAGTATCTTTCCCTAGATGCAGACTGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGCACGTGATTTTTCATAGTATCTTTCCCTAGATGCAGACTGAA  584

seq1  ACTAACAGTTCTCTTATTTGCTTATTAGAAAGCTAGCGTGTTGAGGTACT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACAGTTCTCTTATTTGCTTATTAGAAAGCTAGCGTGTTGAGGTACT  634

seq1  ATATTCTTCTTTGCTAATGAAAGATTATCTCCTGTTCCATGGGCCCTCCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTTCTTTGCTAATGAAAGATTATCTCCTGTTCCATGGGCCCTCCT  684

seq1  GCTGCTTTAAATAACTCAGCAGTATAACCCTCTACTTGATTGTATGTCAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTTAAATAACTCAGCAGTATAACCCTCTACTTGATTGTATGTCAT  734

seq1  CCACACTCCTGCCCCAGCTCGTTACTGAACAGAGTGTTCAAAATGGTTTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTCCTGCCCCAGCTCGTTACTGAACAGAGTGTTCAAAATGGTTTC  784

seq1  AGCACGTCTGGCAGTGATAATTTCCCAGTGGCCCGATTAGATGAGACTTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACGTCTGGCAGTGATAATTTCCCAGTGGCCCGATTAGATGAGACTTC  834

seq1  AGGAGGGTATATTTTGGATGAATACTTAGAAACCGAATATGACAGTAGAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGTATATTTTGGATGAATACTTAGAAACCGAATATGACAGTAGAG  884

seq1  TGTTTGGCAGCCCACCAATAGGTTCATGAAACTGAATCGCTCCCTTCTAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGCAGCCCACCAATAGGTTCATGAAACTGAATCGCTCCCTTCTAA  934

seq1  AATTTCCCTCCAGCACTTAGAAATTAGTCTCTATTCATTCGTCAAAGACA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCCTCCAGCACTTAGAAATTAGTCTCTATTCATTCGTCAAAGACA  984

seq1  CTGTACTCTACTCAAGGAGGAATCATGCCTACTTCTCTGATTAACTTAGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTCTACTCAAGGAGGAATCATGCCTACTTCTCTGATTAACTTAGT  1034

seq1  TGGTGCAGGCCCTCATTACTGTAATTTACAACTTTTAAAACTTTTAACGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCAGGCCCTCATTACTGTAATTTACAACTTTTAAAACTTTTAACGG  1084

seq1  GAATTTTCTCTTGGAACTTTCTCTTAAAACTTTTAAGAGAATTC  1141
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTCTCTTGGAACTTTCTCTTAAAACTTTTAAGAGAATTC  1128