BAC Information

Click to search

BAC

Clone NameB6Ng01-061O05
Chromosome7 (Build37)
Map Location 116,009,056 - 116,010,177
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr472, Olfr473, LOC669301, Olfr474, Olfr476, Olfr477, LOC626732, Olfr478, Olfr479, Olfr480, Olfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490, LOC626881, Olfr491, Olfr492, Olfr493, Olfr494, Olfr495, Olfr496-ps1, Olfr497, Olfr498, Olfr499-ps1, Olfr500-ps1, Olfr501-ps1, Olfr502, LOC269980, Olfr503, Olfr504, Olfr505-ps1, Olfr506, Olfr507, Olfr508, Olfr509, Olfr510, Olfr511-ps1, Olfr512, Olfr513, Olfr514, Olfr515-ps1, Olfr516
Downstream geneOlfr517, Olfr518, Olfr519, Nlrp10, Eif3s5, BC049265, Tub, Ric3, Lmo1, Stk33, EG668320, 1700095J03Rik, Trim66, Rpl27a, St5, LOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061O05.bB6Ng01-061O05.g
ACCDH882446DH882447
length1,1561,117
definitionDH882446|Mus musculus domesticus DNA, BAC clone: B6Ng01-061O05, 5' end.DH882447|Mus musculus domesticus DNA, BAC clone: B6Ng01-061O05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaaacacctgaaaatatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttatacaaccactctggaaatcagtctggtggttactca
gaaaataggacatgttactaccagaggatcccccaatacctctcctgggc
atatatccagaggatgttccaagtagtaagaaagaaacctactccactat
gttcatagcagccttatttataacagccagaagctgaaaagaacccagat
gcccctcaacagaggaagggatacaaaaaatgtggtacatttacacaatg
gagtcctagtcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggttggacctggagggcattatcctgagtgaggtaacccaatcacaaa
agaattcaaatgatatgtactcattgataagtggatattagcccagaaac
ttagaatacccaagatataaattacaattttcaaaacatatgaaactcaa
aaagaacaaagaccaaagtgtggacactttgccccttcttagaattggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgtgatg
aaaggatgtaccatctagagactgccatatccagggatccatcccataat
cagcttccaaacactgacaccattgcacacattagcaagattttgctgaa
aggacccagatatagctgtctcttgtgagactatgccagggcctagcaac
acagaagtggatgctcatagtcacctattggatggatcacagggccccaa
tggaggagctagagaattacccaaggagcttaagggaacagcaccctata
gtggacaacattatgactatcagtacccggacttcttgactctagtgcat
atgtatcaaagaggcctagtcgccatcactggaagagagtcatggacttg
catctttatgctcatacaggatggcaaggcaaaagtggagtggtggtagg
gaattg
gaattctatgagatgggcaccctctcttcactctggaccccagagtaaga
ctgtcgattcagtgcagctcttgagaaggtacagcttagaagacaggggc
tttctcaagggttttcctaaggtttgagtggtcaaagtccagctggccac
tgagggaaagagtggctgctagccatggcatgctttaggtcctgcgtgat
gatgaccatttaactgtggcctacactaaaccagattgcattctgggcca
tatccatggggataccacaactcagcaccaccagagatggctggtcttca
tgatctgagtgacatgaagctcccacattggccagtagtgtctggcactg
tgcaagcagcacatacccttggagctggatctgctggatggaaaactttc
aggtgtttggaagtctctcctccatcccagctgttcagatggatttcctt
accaaattcagcctcctgcctctcctctaggtaaccccagacattaggac
ttcataaacttgacagttttcactcaccagattagcagccttcccaaggc
catcaaacatgggcatgctatcagtccctggcctgaaattctgctctttt
tcacctccaaacagcatgggatacaaggggttaactttaatgatcccttg
tacaaacagagcaccaatcctgaaaccatagaacttgtgccccatgatgg
tcagaaagtccacacctaagtcctctacatccactcctttcttcccagtg
ccccagcagtatctgtgagcatgaggacttgggcagcccggaagcagcca
ggatctggttctgtgccttaatgtgtcaacggatccctgagacaagcatg
atgacactggtcttgttatgggccattatgatggtcataaggcttgtggt
ggggctaacagcctcacctctgcctgcccattcccttgacacaaagtgtc
aaagttgacttctgtcatttgtcttctataaggtgctcaggggcagctgg
atggagtcatgttccactatgcaggtaataaaatagggcctgatctcttc
tcaggacttgtgatggtcaatcatgtgccctttcagggtctggctgtaat
ggaaccatctcacataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_116009056_116010177
seq2: B6Ng01-061O05.g_69_1185 (reverse)

seq1  TTATGGTGAGATGTTTCCATTAACAG-CAGACCCTGAAGGGGCACATGAT  49
      |||| |||||||| ||||||| |||| ||||||||||| |||||||||||
seq2  TTAT-GTGAGATGGTTCCATT-ACAGCCAGACCCTGAAAGGGCACATGAT  48

seq1  TGACCATCAC-AGTCCTGAGGAGGGGACCAGGCCCTATTTTATTACTTGC  98
      |||||||||| |||||||| || | || |||||||||||||||||| |||
seq2  TGACCATCACAAGTCCTGA-GAAGAGATCAGGCCCTATTTTATTACCTGC  97

seq1  ATAGTGGAACATGACTCCATCCAGCTGCCCCTGGAGCACCTAATAGAAGG  148
      |||||||||||||||||||||||||||||||| |||||||| |||||| |
seq2  ATAGTGGAACATGACTCCATCCAGCTGCCCCT-GAGCACCTTATAGAA-G  145

seq1  ACAAATGACAGAAGTCAACTTTGACACTTTTGTGTCAAAGGGAATGGGCA  198
      ||||||||||||||||||||||||||| |||||||| |||||||||||||
seq2  ACAAATGACAGAAGTCAACTTTGACAC-TTTGTGTC-AAGGGAATGGGCA  193

seq1  GGCAGAGGTGAGGCTGTTAGCCCCACCACAAGCCTTATGACCATCATAAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGTGAGGCTGTTAGCCCCACCACAAGCCTTATGACCATCATAAT  243

seq1  GGCCCATAACAAGACCAGTGTCATCATGCTTGTCTCAGGGATCCGTTGAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCATAACAAGACCAGTGTCATCATGCTTGTCTCAGGGATCCGTTGAC  293

seq1  ACATTAAGGCACAGAACCAGATCCTGGCTGCTTCCGGGCTGCCCAAGTCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAGGCACAGAACCAGATCCTGGCTGCTTCCGGGCTGCCCAAGTCC  343

seq1  TCATGCTCACAGATACTGCTGGGGCACTGGGAAGAAAGGAGTGGATGTAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTCACAGATACTGCTGGGGCACTGGGAAGAAAGGAGTGGATGTAG  393

seq1  AGGACTTAGGTGTGGACTTTCTGACCATCATGGGGCACAAGTTCTATGGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTAGGTGTGGACTTTCTGACCATCATGGGGCACAAGTTCTATGGT  443

seq1  TTCAGGATTGGTGCTCTGTTTGTACAAGGGATCATTAAAGTTAACCCCTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGATTGGTGCTCTGTTTGTACAAGGGATCATTAAAGTTAACCCCTT  493

seq1  GTATCCCATGCTGTTTGGAGGTGAAAAAGAGCAGAATTTCAGGCCAGGGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCCATGCTGTTTGGAGGTGAAAAAGAGCAGAATTTCAGGCCAGGGA  543

seq1  CTGATAGCATGCCCATGTTTGATGGCCTTGGGAAGGCTGCTAATCTGGTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAGCATGCCCATGTTTGATGGCCTTGGGAAGGCTGCTAATCTGGTG  593

seq1  AGTGAAAACTGTCAAGTTTATGAAGTCCTAATGTCTGGGGTTACCTAGAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAAACTGTCAAGTTTATGAAGTCCTAATGTCTGGGGTTACCTAGAG  643

seq1  GAGAGGCAGGAGGCTGAATTTGGTAAGGAAATCCATCTGAACAGCTGGGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCAGGAGGCTGAATTTGGTAAGGAAATCCATCTGAACAGCTGGGA  693

seq1  TGGAGGAGAGACTTCCAAACACCTGAAAGTTTTCCATCCAGCAGATCCAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAGAGACTTCCAAACACCTGAAAGTTTTCCATCCAGCAGATCCAG  743

seq1  CTCCAAGGGTATGTGCTGCTTGCACAGTGCCAGACACTACTGGCCAATGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGGGTATGTGCTGCTTGCACAGTGCCAGACACTACTGGCCAATGT  793

seq1  GGGAGCTTCATGTCACTCAGATCATGAAGACCAGCCATCTCTGGTGGTGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCTTCATGTCACTCAGATCATGAAGACCAGCCATCTCTGGTGGTGC  843

seq1  TGAGTTGTGGTATCCCCATGGATATGGCCCAGAATGCAATCTGGTTTAGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGTGGTATCCCCATGGATATGGCCCAGAATGCAATCTGGTTTAGT  893

seq1  GTAGGCCACAGTTAAATGGTCATCATCACGCAGGACCTAAAGCATGCCAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCCACAGTTAAATGGTCATCATCACGCAGGACCTAAAGCATGCCAT  943

seq1  GGCTAGCAGCCACTCTTTCCCTCAGTGGCCAGCTGGACTTTGACCACTCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGCAGCCACTCTTTCCCTCAGTGGCCAGCTGGACTTTGACCACTCA  993

seq1  AACCTTAGGAAAACCCTTGAGAAAGCCCCTGTCTTCTAAGCTGTACCTTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTAGGAAAACCCTTGAGAAAGCCCCTGTCTTCTAAGCTGTACCTTC  1043

seq1  TCAAGAGCTGCACTGAATCGACAGTCTTACTCTGGGGTCCAGAGTGAAGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGCTGCACTGAATCGACAGTCTTACTCTGGGGTCCAGAGTGAAGA  1093

seq1  GAGGGTGCCCATCTCATAGAATTC  1122
      ||||||||||||||||||||||||
seq2  GAGGGTGCCCATCTCATAGAATTC  1117