BAC Information

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BAC

Clone NameB6Ng01-062D11
Chromosome7 (Build37)
Map Location 122,216,667 - 122,314,782
singlet/doubletdoublet
Overlap genenone
Upstream geneRras2, LOC668451, Copb1, Psma1, 4933406I18Rik, Pde3b, Cyp2r1, Calca, LOC100043295, Calcb, Insc, EG627967
Downstream geneLOC668472, Sox6, LOC100042779, 1110006G14Rik, EG668479, LOC100043313, 1110004F10Rik, Plekha7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062D11.bB6Ng01-062D11.g
ACCDH882682DH882683
length1,1811,114
definitionDH882682|Mus musculus domesticus DNA, BAC clone: B6Ng01-062D11, 5' end.DH882683|Mus musculus domesticus DNA, BAC clone: B6Ng01-062D11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,216,667 - 122,217,871)(122,313,665 - 122,314,782)
sequence
gaattccaggcttgaatcaattgctgggttttatggactagtggcttagc
ttctctgttattgtgactttgaagatacaaaatgaagagagttgtccctt
taagacaaacaagggttcttgcaagaatgacaaacatggactgcaaggcc
cattttctgattcctaaagacttcatgagcactgacttccttagccatgc
tgtaaaagaagtggcttctagaaagctcctcagggaggaacagttctgaa
gaaaacgaggttaggtcttccccactagtctgcctcagaattgaaaccct
aaaagaactacccctcactttctcactgagccctctgctgtgcccaaagc
atgcacttcacccatttcttgttaaaatcatcttcagaaaatgttttaaa
gtatagactgcaatccccttttgctgagtcactaagggccacaacccaga
aggtctcttagatctgtagtactcgggaagtaagcctgctcatagatgtt
ggctggcatgtgtgctggcctgctttaataactaaaatatctggctaagt
tctgagctgcaaagttggggagtttttggtgtaatgagactctcagccat
atccaatgagaaagagaaggtgagggaggcactatacctgggatcctctc
tacaccaaggctgtactcgctgtctgcactgtttccaagtgccccaatga
cgagccagtgagctggtgattgtttctcttattttctttgaggtagaaac
tcagagacgctgtgtgacttgctcagcgccgcacagatcttgcattcata
tctgtcagctagccaagctgttctctcctttatcatgttgcctcacacag
gaggggagaggtggcagggaaagtggtgttgcagagttttgattaaggga
agagcatgtagctgagcaaatctgctctgaaggtcaagctctggtcctag
agatctcctatcatctgcctcagtctttgtttctggaaaacagttgtcag
gtaggctggatacctgtaatctctgcttaggaaggtcacctcatgattac
ctttgtgaacatcactggatgagaggatattcttcaggttttcccagctt
aaacatgcccattattcaaatcaaatcactgagctcagcactataacatg
agtgaaataaggattgtcactgggaccaatg
gaattcaacatccgagggaacgaagaattatgcacacacatagaacacag
tctgctcactgtatctctgcaggccttgcatccagcttgaacatgatgca
tccgcatagccacttcttgcaatttttcaaaatgtttttgtgtgcaccct
ctcggagaggaggctgcaagtgggagttctcacctgtacttcctggagag
gaaaataagagaaattcaacagtgtcagtgtgccactttgaatcattgaa
ttctgcaggcaagtcaatcttgaatcctagtctcacacaggagtctacac
ctctaccctagctacagaacaacaaacaacaacaacaacaacaacaacag
gacattgagatttctgtgcagaggaaatgttaaatgagcttctttccaga
gagaccagtttggggtagatgcttattggtggaaggtgaatgaagtgcta
ggagaagctagcccagcacacttagaaaaaataaaaaaagtcccagagca
ggctagaaggactcatcctgtttgtggccgcaggcagatctggggaataa
atgcaggctgagctcctccctccagttcttgggggctcagcacctccctc
ctgggctccatccagtccgctctgctcttgccaggggctggagtgctggt
ggccggctcctccagctcgcctctattggcccgactgtgtcctagcccgc
tctggatattagagcattctctcctttgaaaggctcctttatttttagtg
ctaaatcaacaaagctgttactgtcattttccatcagaccgtcatcttcc
gcggattcaaaattacactcagctgcaaactattgacactcctcttaaca
aaaaaatggttttaataatctttacattagcctatgagataaaaaaaatc
ttttaccatgaatatacaagtgtaataagttgttttatgaaagttttatt
tactttacaaaagaaaaattgggcgtgggatcacgaacatcctgtacttc
taacacgttgttataaattacatgttctttccattacatctgaaaagaga
ctggaatttaaatttcaaaccacttgcatactacttattaagtgctgaca
tgagtaaaggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_122216667_122217871
seq2: B6Ng01-062D11.b_47_1227

seq1  GAATTCCAGGCTTGAATCAATTGCTGGGTTTTATGGACTAGTGGCTTAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCTTGAATCAATTGCTGGGTTTTATGGACTAGTGGCTTAGC  50

seq1  TTCTCTGTTATTGTGACTTTGAAGATACAAAATGAAGAGAGTTGTCCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTTATTGTGACTTTGAAGATACAAAATGAAGAGAGTTGTCCCTT  100

seq1  TAAGACAAACAAGGGTTCTTGCAAGAATGACAAACATGGACTGCAAGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAAACAAGGGTTCTTGCAAGAATGACAAACATGGACTGCAAGGCC  150

seq1  CATTTTCTGATTCCTAAAGACTTCATGAGCACTGACTTCCTTAGCCATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTGATTCCTAAAGACTTCATGAGCACTGACTTCCTTAGCCATGC  200

seq1  TGTAAAAGAAGTGGCTTCTAGAAAGCTCCTCAGGGAGGAACAGTTCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAGAAGTGGCTTCTAGAAAGCTCCTCAGGGAGGAACAGTTCTGAA  250

seq1  GAAAACGAGGTTAGGTCTTCCCCACTAGTCTGCCTCAGAATTGAAACCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACGAGGTTAGGTCTTCCCCACTAGTCTGCCTCAGAATTGAAACCCT  300

seq1  AAAAGAACTACCCCTCACTTTCTCACTGAGCCCTCTGCTGTGCCCAAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACTACCCCTCACTTTCTCACTGAGCCCTCTGCTGTGCCCAAAGC  350

seq1  ATGCACTTCACCCATTTCTTGTTAAAATCATCTTCAGAAAATGTTTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTTCACCCATTTCTTGTTAAAATCATCTTCAGAAAATGTTTTAAA  400

seq1  GTATAGACTGCAATCCCCTTTTGCTGAGTCACTAAGGGCCACAACCCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGACTGCAATCCCCTTTTGCTGAGTCACTAAGGGCCACAACCCAGA  450

seq1  AGGTCTCTTAGATCTGTAGTACTCGGGAAGTAAGCCTGCTCATAGATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTCTTAGATCTGTAGTACTCGGGAAGTAAGCCTGCTCATAGATGTT  500

seq1  GGCTGGCATGTGTGCTGGCCTGCTTTAATAACTAAAATATCTGGCTAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCATGTGTGCTGGCCTGCTTTAATAACTAAAATATCTGGCTAAGT  550

seq1  TCTGAGCTGCAAAGTTGGGGAGTTTTTGGTGTAATGAGACTCTCAGCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCTGCAAAGTTGGGGAGTTTTTGGTGTAATGAGACTCTCAGCCAT  600

seq1  ATCCAATGAGAAAGAGAAGGTGAGGGAGGCACTATACCTGGGATCCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAATGAGAAAGAGAAGGTGAGGGAGGCACTATACCTGGGATCCTCTC  650

seq1  TACACCAAGGCTGTACTCGCTGTCTGCACTGTTTCCAAGTGCCCCAATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCAAGGCTGTACTCGCTGTCTGCACTGTTTCCAAGTGCCCCAATGA  700

seq1  CGAGCCAGTGAGCTGGTGATTGTTTCTCTTATTTTCTTTGAGGTAGAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCCAGTGAGCTGGTGATTGTTTCTCTTATTTTCTTTGAGGTAGAAAC  750

seq1  TCAGAGACGCTGTGTGACTTGCTCAGCGCCGCACAGATCTTGCATTCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGACGCTGTGTGACTTGCTCAGCGCCGCACAGATCTTGCATTCATA  800

seq1  TCTGTCAGCTAGCCAAGCTGTTCTCTCCTTTATCATGTTGCCTCACACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAGCTAGCCAAGCTGTTCTCTCCTTTATCATGTTGCCTCACACAG  850

seq1  GAGGGGAGAGGTGGCAGGGAAAGTGGTGTTGCAGAGTTTTGATTAAGGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAGAGGTGGCAGGGAAAGTGGTGTTGCAGAGTTTTGATTAAGGGA  900

seq1  AGAGCATGTAGCTGAGCAAATCTGCTCTGAAGGTCAAGCTCTGGTCCTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATGTAGCTGAGCAAATCTGCTCTGAAGGTCAAGCTCTGGTCCTAG  950

seq1  AGATCTCCTATCATCTGCCCCAGTCTTTGTTTCTGGAAAACAGTTGTCAG  1000
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGATCTCCTATCATCTGCCTCAGTCTTTGTTTCTGGAAAACAGTTGTCAG  1000

seq1  GTAAGGCTGGATACCTGTAATCCTCTGCTTAAGGAAGGTCACCTCATGAT  1050
      || |||||||||||||||||| |||||||| |||||||||||||||||||
seq2  GT-AGGCTGGATACCTGTAAT-CTCTGCTT-AGGAAGGTCACCTCATGAT  1047

seq1  TACCTTTGTGACACAATTCACTGGAATGAGAAGGATATTCTTCAAGTTTT  1100
      ||||||||||| |||  ||||||| ||||| ||||||||||||| |||||
seq2  TACCTTTGTGA-ACA--TCACTGG-ATGAG-AGGATATTCTTCAGGTTTT  1092

seq1  TCCACAGCATATAACATGCCTCATTAATCAAAATCAAATCAACCTGAGCC  1150
        | |||| || |||||||| ||||| || |||||||||||  ||||| |
seq2  --CCCAGCTTA-AACATGCC-CATTATTC-AAATCAAATCA--CTGAG-C  1134

seq1  CCAGCACTAATAACATGAGTGAGATTAAGGAATTGGTCTCACTGGGGACC  1200
       ||||||| ||||||||||||| | ||||| ||||   ||||||||   |
seq2  TCAGCACT-ATAACATGAGTGA-AATAAGG-ATTG---TCACTGGG--AC  1176

seq1  CAATG  1205
      |||||
seq2  CAATG  1181

seq1: chr7_122313665_122314782
seq2: B6Ng01-062D11.g_68_1181 (reverse)

seq1  TCCTCCTTTTACTTCATGTCAGCACTATAT-AGTAGGTATGCCAAGTGGT  49
      |||||| ||||| |||||||||||||  || |||| ||||| ||||||| 
seq2  TCCTCC-TTTAC-TCATGTCAGCACTTAATAAGTA-GTATG-CAAGTGG-  45

seq1  TTTGAAATTTAAATTACAGTCTCTTTTTCAGATGTTATTGGAAAGAACAT  99
      ||||||||||||||| ||||||| |||||||||| || ||||||||||||
seq2  TTTGAAATTTAAATTCCAGTCTC-TTTTCAGATG-TAATGGAAAGAACAT  93

seq1  GTAATTTATAACCACGTGTTAGGAGTACAGGATGTTCGTGGT-CCACTGC  148
      |||||||||||| ||||||||| ||||||||||||||||| | ||||  |
seq2  GTAATTTATAACAACGTGTTAGAAGTACAGGATGTTCGTGATCCCACGCC  143

seq1  CAATTTTTCTTTTGTAAAGTTAATAAAACTTTCATAAAAC-ACTTA-TAC  196
      |||||||||||||||||||| ||||||||||||||||||| ||||| |||
seq2  CAATTTTTCTTTTGTAAAGTAAATAAAACTTTCATAAAACAACTTATTAC  193

seq1  ACTTGTATATTTCATGGT-AAAGATTTTTTTTATCTCATAGGCTAATGTA  245
      ||||||||| |||||||| |||||||||||||||||||||||||||||||
seq2  ACTTGTATA-TTCATGGTAAAAGATTTTTTTTATCTCATAGGCTAATGTA  242

seq1  AAGATTTATTAAAACCATTTTTTTGTTAAGAGGAGTGTCAATAGTTTGCA  295
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGA-TTATTAAAACCATTTTTTTGTTAAGAGGAGTGTCAATAGTTTGCA  291

seq1  GCTGAGTGTAATTTTGAATCCGCGGAAGATGACGGTCTGATGGAAAATGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTGTAATTTTGAATCCGCGGAAGATGACGGTCTGATGGAAAATGA  341

seq1  CAGTAACAGCTTTGTTGATTTAGCACTAAAAATAAAGGAGCCTTTCAAAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAACAGCTTTGTTGATTTAGCACTAAAAATAAAGGAGCCTTTCAAAG  391

seq1  GAGAGAATGCTCTAATATCCAGAGCGGGCTAGGACACAGTCGGGCCAATA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAATGCTCTAATATCCAGAGCGGGCTAGGACACAGTCGGGCCAATA  441

seq1  GAGGCGAGCTGGAGGAGCCGGCCACCAGCACTCCAGCCCCTGGCAAGAGC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCGAGCTGGAGGAGCCGGCCACCAGCACTCCAGCCCCTGGCAAGAGC  491

seq1  AGAGCGGACTGGATGGAGCCCAGGAGGGAGGTGCTGAGCCCCCAAGAACT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCGGACTGGATGGAGCCCAGGAGGGAGGTGCTGAGCCCCCAAGAACT  541

seq1  GGAGGGAGGAGCTCAGCCTGCATTTATTCCCCAGATCTGCCTGCGGCCAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAGGAGCTCAGCCTGCATTTATTCCCCAGATCTGCCTGCGGCCAC  591

seq1  AAACAGGATGAGTCCTTCTAGCCTGCTCTGGGACTTTTTTTATTTTTTCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGATGAGTCCTTCTAGCCTGCTCTGGGACTTTTTTTATTTTTTCT  641

seq1  AAGTGTGCTGGGCTAGCTTCTCCTAGCACTTCATTCACCTTCCACCAATA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGCTGGGCTAGCTTCTCCTAGCACTTCATTCACCTTCCACCAATA  691

seq1  AGCATCTACCCCAAACTGGTCTCTCTGGAAAGAAGCTCATTTAACATTTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTACCCCAAACTGGTCTCTCTGGAAAGAAGCTCATTTAACATTTC  741

seq1  CTCTGCACAGAAATCTCAATGTCCTGTTGTTGTTGTTGTTGTTGTTGTTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCACAGAAATCTCAATGTCCTGTTGTTGTTGTTGTTGTTGTTGTTT  791

seq1  GTTGTTCTGTAGCTAGGGTAGAGGTGTAGACTCCTGTGTGAGACTAGGAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCTGTAGCTAGGGTAGAGGTGTAGACTCCTGTGTGAGACTAGGAT  841

seq1  TCAAGATTGACTTGCCTGCAGAATTCAATGATTCAAAGTGGCACACTGAC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATTGACTTGCCTGCAGAATTCAATGATTCAAAGTGGCACACTGAC  891

seq1  ACTGTTGAATTTCTCTTATTTTCCTCTCCAGGAAGTACAGGTGAGAACTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGAATTTCTCTTATTTTCCTCTCCAGGAAGTACAGGTGAGAACTC  941

seq1  CCACTTGCAGCCTCCTCTCCGAGAGGGTGCACACAAAAACATTTTGAAAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTGCAGCCTCCTCTCCGAGAGGGTGCACACAAAAACATTTTGAAAA  991

seq1  ATTGCAAGAAGTGGCTATGCGGATGCATCATGTTCAAGCTGGATGCAAGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAAGAAGTGGCTATGCGGATGCATCATGTTCAAGCTGGATGCAAGG  1041

seq1  CCTGCAGAGATACAGTGAGCAGACTGTGTTCTATGTGTGTGCATAATTCT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGAGATACAGTGAGCAGACTGTGTTCTATGTGTGTGCATAATTCT  1091

seq1  TCGTTCCCTCGGATGTTGAATTC  1118
      |||||||||||||||||||||||
seq2  TCGTTCCCTCGGATGTTGAATTC  1114