BAC Information

Click to search

BAC

Clone NameB6Ng01-062E19
Chromosome7 (Build37)
Map Location 146,409,196 - 146,410,326
singlet/doubletsinglet
Overlap geneLrrc27
Upstream geneTcerg1l, LOC100043290, Mapk1ip1, Ppp2r2d, Bnip3, EG668784, LOC669185, 6330417G02Rik, Dpysl4, Stk32c, LOC100038956
Downstream genePwwp2, Inpp5a, Nkx6-2, E030019B06Rik, 9330101J02Rik, LOC100043472, EG434253, EG664869, Gpr123, LOC244229, Kndc1, Utf1, LOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3, Drd1ip, Prap1, 1810014F10Rik, Echs1, Paox, Mtg1, Sprn, Olfr522, Olfr523, Olfr524, E430002D04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062E19.bB6Ng01-062E19.g
ACCDH882743DH882744
length1,113483
definitionDH882743|Mus musculus domesticus DNA, BAC clone: B6Ng01-062E19, 5' end.DH882744|Mus musculus domesticus DNA, BAC clone: B6Ng01-062E19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaggccagtctgggcaatagtagagtgagcccctgtatccacag
aaacagaagaataaacaactgtcaattctcattacccatttccccatctt
tttctcatcctcttcttcatcctcttccttcttctgagccagtcttttgt
agcccaagctggctcaggaactccccatatcgctgaagataacgttgaac
tcaggagttccctgactccacctgccttcctctccctcctgagtccctct
ccaagaagtgggcagaggactgaaatttcccctccactccagggcaggtc
actacactgacagcactgaacctgagacactgccctctggaatttcctcc
tcgcctgattgtgcagaaaggcttggtagccatcctcaccttcctacgca
tctgctcagtggagaaggccttccctggagatgagttgcttccaggtttg
tagagaattttctgtcactagatgagacctaggagtgtgtgtggcttccc
cagcttctgtagggctcgcatggcaaagactagcccatacactggcccaa
acaccatgccttgccctggctcagatccactctgagcagtacacgcctgt
ttgggtaggcgaggtaagagtccatgggataaggcaagtggagcagtctt
tacctccaagccaagcaagcagctgctctgagagggccttgtgctcctcc
agacagcattttaaaaagctccatgaaacataccctgtccctgcctagat
actaagagctggcttaataagcaggttgtacccttgtgggagatacatgc
actgccccatgctgtcaacatattgagcagtcagagagaaaggaagggga
agggaatggtgcaccagtctttgccttggtcatccaccatgagtgtcttg
aagtgttttgaagcaatcacgttcataaagggccttagctggtgtcagcc
ctagctctgagtcaggatcccatggcctgtgggtggattcagagtgactc
agaaacattagaggagtgcagcaggaaggtgagaagctggcttagcaagg
ccctgggactcttggtgcagtcaggctcaaggtctgtgcctccaggacct
actgaggctcctc
cttaggtggaccatgcaaccttcctctcctatctagcagatccaggctca
gtggggcccaggctgccaagctgttgcagtcaggtgggctagtgaggaca
gttacagcccctgggacaaaggagacagaggggatggagagatcacaggg
gtggggttaggggggacagagatatcccagatacagcaagcaaccacctt
ggggtccgtagtaccttaaacagctggccatgcagctgagctcatgacac
atggctccgggcgtgtggtttttagtatgacctgggagctctaggactgg
ggaagagaactcaaattcaggttcatcttttccccgacactaaacctgac
cccctgtcaggtcctgacccctgtatgctttttgtatcggcttacacaca
atctgtgaccttctccagagctgatctgtcagaagtttttccatcatcac
caaatcacgcaagacgaaaagaactccatgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_146409196_146410326
seq2: B6Ng01-062E19.b_48_1160

seq1  GAATTCTAGGCCAGTCTGGGCAATAGTAGAGTGAGCCCCTGTATCCACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCCAGTCTGGGCAATAGTAGAGTGAGCCCCTGTATCCACAG  50

seq1  AAACAGAAGAATAAACAACTGTCAATTCTCATTACCCATTTCCCCATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAAGAATAAACAACTGTCAATTCTCATTACCCATTTCCCCATCTT  100

seq1  TTTCTCATCCTCTTCTTCATCCTCTTCCTTCTTCTGAGCCAGTCTTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATCCTCTTCTTCATCCTCTTCCTTCTTCTGAGCCAGTCTTTTGT  150

seq1  AGCCCAAGCTGGCTCAGGAACTCCCCATATCGCTGAAGATAACGTTGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAAGCTGGCTCAGGAACTCCCCATATCGCTGAAGATAACGTTGAAC  200

seq1  TCAGGAGTTCCCTGACTCCACCTGCCTTCCTCTCCCTCCTGAGTCCCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGTTCCCTGACTCCACCTGCCTTCCTCTCCCTCCTGAGTCCCTCT  250

seq1  CCAAGAAGTGGGCAGAGGACTGAAATTTCCCCTCCACTCCAGGGCAGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAGTGGGCAGAGGACTGAAATTTCCCCTCCACTCCAGGGCAGGTC  300

seq1  ACTACACTGACAGCACTGAACCTGAGACACTGCCCTCTGGAATTTCCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACACTGACAGCACTGAACCTGAGACACTGCCCTCTGGAATTTCCTCC  350

seq1  TCGCCTGATTGTGCAGAAAGGCTTGGTAGCCATCCTCACCTTCCTACGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCTGATTGTGCAGAAAGGCTTGGTAGCCATCCTCACCTTCCTACGCA  400

seq1  TCTGCTCAGTGGAGAAGGCCTTCCCTGGAGATGAGTTGCTTCCAGGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCAGTGGAGAAGGCCTTCCCTGGAGATGAGTTGCTTCCAGGTTTG  450

seq1  TAGAGAATTTTCTGTCACTAGATGAGACCTAGGAGTGTGTGTGGCTTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAATTTTCTGTCACTAGATGAGACCTAGGAGTGTGTGTGGCTTCCC  500

seq1  CAGCTTCTGTAGGGCTCGCATGGCAAAGACTAGCCCATACACTGGCCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCTGTAGGGCTCGCATGGCAAAGACTAGCCCATACACTGGCCCAA  550

seq1  ACACCATGCCTTGCCCTGGCTCAGATCCACTCTGAGCAGTACACGCCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATGCCTTGCCCTGGCTCAGATCCACTCTGAGCAGTACACGCCTGT  600

seq1  TTGGGTAGGCGAGGTAAGAGTCCATGGGATAAGGCAAGTGGAGCAGTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTAGGCGAGGTAAGAGTCCATGGGATAAGGCAAGTGGAGCAGTCTT  650

seq1  TACCTCCAAGCCAAGCAAGCAGCTGCTCTGAGAGGGCCTTGTGCTCCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCAAGCCAAGCAAGCAGCTGCTCTGAGAGGGCCTTGTGCTCCTCC  700

seq1  AGACAGCATTTTAAAAAGCTCCATGAAACATACCCTGTCCCTGCCTAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCATTTTAAAAAGCTCCATGAAACATACCCTGTCCCTGCCTAGAT  750

seq1  ACTAAGAGCTGGCTTAATAAGCAGGTTGTACCCTTGTGGGAGATACATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGAGCTGGCTTAATAAGCAGGTTGTACCCTTGTGGGAGATACATGC  800

seq1  ACTGCCCCATGCTGTCAACATATTGAGCAGTCAGAGAG-AAGGAAGGGGA  849
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACTGCCCCATGCTGTCAACATATTGAGCAGTCAGAGAGAAAGGAAGGGGA  850

seq1  AGGGAATGGTGCACCAGTCTTTGCCTTGGTCATCCACCATGAGTGTCTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATGGTGCACCAGTCTTTGCCTTGGTCATCCACCATGAGTGTCTTG  900

seq1  AAGTGTTTTGAAGCAATCACGTTCATAAAGGGCCTTAGCTGGTGTCAGGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAGTGTTTTGAAGCAATCACGTTCATAAAGGGCCTTAGCTGGTGTCA-GC  949

seq1  CCTAGCTCTGAGTCAGGGATCCCAGGGCCTGTGGGTGGATTCAGAGGTGA  999
      ||||||||||||||| |||||||| |||||||||||||||||||| ||||
seq2  CCTAGCTCTGAGTCA-GGATCCCATGGCCTGTGGGTGGATTCAGA-GTGA  997

seq1  CCCAGAAACATTAGAGGGAGTGGCAGCAGGGAAGGTGAGAAGCTGTGCCT  1049
      | ||||||||||||| ||||| |||||| ||||||||||||||  || ||
seq2  CTCAGAAACATTAGA-GGAGT-GCAGCA-GGAAGGTGAGAAGC--TGGCT  1042

seq1  TAGCAAGGCCCTGGGACTCTTGTGTGCAGTCCAGGCCTCAAGGGTTCCTG  1099
      |||||||||||||||||||||| ||||||| |||| |||||||    |||
seq2  TAGCAAGGCCCTGGGACTCTTG-GTGCAGT-CAGG-CTCAAGG---TCTG  1086

seq1  TGCCTACACAGGACCTTAGCTGAGGGCTCCTC  1131
      |||||   ||||||||   |||| ||||||||
seq2  TGCCT--CCAGGACCT--ACTGA-GGCTCCTC  1113