BAC Information

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BAC

Clone NameB6Ng01-062K22
Chromosome7 (Build37)
Map Location 151,654,213 - 151,655,379
singlet/doubletsinglet
Overlap geneCttn
Upstream geneSlc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg, Mrgpre, Nadsyn1, Dhcr7, Gm498, Shank2
Downstream genePpfia1, Fadd, Tmem16a, LOC669079, LOC677315, Fgf3, Fgf4, Fgf15, Oraov1, Ccnd1, 1810010D01Rik, LOC100040049, Tpcn2, Mrgprf, Mrgprd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062K22.bB6Ng01-062K22.g
ACCDH883005DH883006
length1,146214
definitionDH883005|Mus musculus domesticus DNA, BAC clone: B6Ng01-062K22, 5' end.DH883006|Mus musculus domesticus DNA, BAC clone: B6Ng01-062K22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctgttgtgcccagtgaagcaagcagaggctttagcccttccta
gtggtttgccctggctgcactgcctgggccttgccagtaagtagcccaag
ctccagtaagtcctcaccacccagtagaccctcacagtcagaacttacag
cccaccccccacccccctcccccagcgtccaccaggggtcaggcctctgc
tggctcacccagagtgagtcaccagttcaggccctgagtcaacactgctt
ctctgtttgactgagaaggttgtcaccagaagtttgaaggagggagaagc
agcttttgtgggagcttcagatgtagaagagtgcagaggtggggttgaag
aactgattgtggtactaggtctccagagcaccctgggccttgctagacag
cttctccacccaactttagccctggccctagagctgacctttaattgagg
gcttatgacagttatgcctttaacaccttgtaaaatgccagggaatttaa
ttggcccttcagactttgacctgttagtcgggaaggcacctggcataact
ccgcaccgtcctgagcatccttacctccttgtgcccctggtctttgtcct
gggcatggtcgtgtctgcctaccagcttgtctcttaatggagtcctgggc
aggctagcctactccgtctgtgcactggcctccataggcatggggtgggg
gttgccctttccataacaactcctgacccagccacctttgctccgctgcg
ctataggtatcaggttcagggcctcaagatggtggattcctccatcctgt
gactaggtcctctctgactgagcttcgtgctggctgtgtggggctgagtg
gctttctctgtccccgtctgatttctatcagctttattgatatttcaccc
tacacgtgatcacccgattgaagggttcagtggttatcgatgtattcaga
gttgtacagccatcacacaaacagttttggccttctcagagatctacata
gatgtgcatgcccatgtccagtggctggaatgctgagcagaagaacctta
agaccagagtctggccagcctaggacaacctggattgctgtctggatagg
cttctctttcaactcctcctccccatccttttgggggtggatgcat
atgggtgaacgcatgaaggagtaataggtgggtgggtgggtaaatggatg
tgtatgcattcatgaataaatgagtggatgactaaatgaatgagtccatg
aatggatggaaggtggatggatgatgtgtagatagataggtgcatagatg
accactgaacgaattaatgaatgaatgaatgaaccatgtgggaaaaatgt
ttggttgttccatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_151654213_151655379
seq2: B6Ng01-062K22.b_47_1192 (reverse)

seq1  ATGCATCCCAACCACCACCAAAAAGGGAGTGGGAGGGAGGAGTAGAAAGA  50
      ||||||     ||||| ||||||  ||| ||||  |||||||| ||||||
seq2  ATGCAT-----CCACCCCCAAAA--GGA-TGGGGAGGAGGAGTTGAAAGA  42

seq1  GAGACACATACAGACAGACAGACTCCAGGTTTGTTCCTAGGCTGGCCAGA  100
      ||  |  || |||||||    | ||||||||   ||||||||||||||| 
seq2  GAAGCCTATCCAGACAG---CAATCCAGGTT--GTCCTAGGCTGGCCAG-  86

seq1  ACTCCTTGGTCTTAAGG-TCCTCTGCTTCAGCATTCCCAGCCACTGGGAC  149
      ||||  ||||||||||| || ||||| |||||||| |||||||||||   
seq2  ACTC--TGGTCTTAAGGTTCTTCTGC-TCAGCATT-CCAGCCACTGG--A  130

seq1  CATGGGCATGCACATTCTATGTAGATCTCTGAGAAGGCCAAAACTGTTTG  199
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CATGGGCATGCACA-TCTATGTAGATCTCTGAGAAGGCCAAAACTGTTTG  179

seq1  TGGTGATGGCTGTACAACTCTGAATACATCGATAACCACTGAACCCTTCA  249
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-GTGATGGCTGTACAACTCTGAATACATCGATAACCACTGAACCCTTCA  228

seq1  ATCGGGTGATCACGTGTAGGGTGAAATATCAATAAAGCTGATAGAAATCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGGTGATCACGTGTAGGGTGAAATATCAATAAAGCTGATAGAAATCA  278

seq1  GACGGGGACAGAGAAAGCCACTCAGCCCCACACAGCCAGCACGAAGCTCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGGGACAGAGAAAGCCACTCAGCCCCACACAGCCAGCACGAAGCTCA  328

seq1  GTCAGAGAGGACCTAGTCACAGGATGGAGGAATCCACCATCTTGAGGCCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGAGGACCTAGTCACAGGATGGAGGAATCCACCATCTTGAGGCCC  378

seq1  TGAACCTGATACCTATAGCGCAGCGGAGCAAAGGTGGCTGGGTCAGGAGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTGATACCTATAGCGCAGCGGAGCAAAGGTGGCTGGGTCAGGAGT  428

seq1  TGTTATGGAAAGGGCAACCCCCACCCCATGCCTATGGAGGCCAGTGCACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGGAAAGGGCAACCCCCACCCCATGCCTATGGAGGCCAGTGCACA  478

seq1  GACGGAGTAGGCTAGCCTGCCCAGGACTCCATTAAGAGACAAGCTGGTAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGAGTAGGCTAGCCTGCCCAGGACTCCATTAAGAGACAAGCTGGTAG  528

seq1  GCAGACACGACCATGCCCAGGACAAAGACCAGGGGCACAAGGAGGTAAGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACACGACCATGCCCAGGACAAAGACCAGGGGCACAAGGAGGTAAGG  578

seq1  ATGCTCAGGACGGTGCGGAGTTATGCCAGGTGCCTTCCCGACTAACAGGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCAGGACGGTGCGGAGTTATGCCAGGTGCCTTCCCGACTAACAGGT  628

seq1  CAAAGTCTGAAGGGCCAATTAAATTCCCTGGCATTTTACAAGGTGTTAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCTGAAGGGCCAATTAAATTCCCTGGCATTTTACAAGGTGTTAAA  678

seq1  GGCATAACTGTCATAAGCCCTCAATTAAAGGTCAGCTCTAGGGCCAGGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAACTGTCATAAGCCCTCAATTAAAGGTCAGCTCTAGGGCCAGGGC  728

seq1  TAAAGTTGGGTGGAGAAGCTGTCTAGCAAGGCCCAGGGTGCTCTGGAGAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTGGGTGGAGAAGCTGTCTAGCAAGGCCCAGGGTGCTCTGGAGAC  778

seq1  CTAGTACCACAATCAGTTCTTCAACCCCACCTCTGCACTCTTCTACATCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTACCACAATCAGTTCTTCAACCCCACCTCTGCACTCTTCTACATCT  828

seq1  GAAGCTCCCACAAAAGCTGCTTCTCCCTCCTTCAAACTTCTGGTGACAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTCCCACAAAAGCTGCTTCTCCCTCCTTCAAACTTCTGGTGACAAC  878

seq1  CTTCTCAGTCAAACAGAGAAGCAGTGTTGACTCAGGGCCTGAACTGGTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCAGTCAAACAGAGAAGCAGTGTTGACTCAGGGCCTGAACTGGTGA  928

seq1  CTCACTCTGGGTGAGCCAGCAGAGGCCTGACCCCTGGTGGACGCTGGGGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCTGGGTGAGCCAGCAGAGGCCTGACCCCTGGTGGACGCTGGGGG  978

seq1  AGGGGGGTGGGGGGTGGGCTGTAAGTTCTGACTGTGAGGGTCTACTGGGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGGTGGGGGGTGGGCTGTAAGTTCTGACTGTGAGGGTCTACTGGGT  1028

seq1  GGTGAGGACTTACTGGAGCTTGGGCTACTTACTGGCAAGGCCCAGGCAGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGGACTTACTGGAGCTTGGGCTACTTACTGGCAAGGCCCAGGCAGT  1078

seq1  GCAGCCAGGGCAAACCACTAGGAAGGGCTAAAGCCTCTGCTTGCTTCACT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCAGGGCAAACCACTAGGAAGGGCTAAAGCCTCTGCTTGCTTCACT  1128

seq1  GGGCACAACAGGGAATTC  1167
      ||||||||||||||||||
seq2  GGGCACAACAGGGAATTC  1146