BAC Information

Click to search

BAC

Clone NameB6Ng01-063B02
Chromosome7 (Build37)
Map Location 114,740,967 - 114,916,857
singlet/doubletdoublet
Overlap genePpfibp2, 5330417H12Rik, Cyb5r2
Upstream geneGm1966, LOC100042141, Olfr693, Olfr694, Olfr695, Olfr696-ps1, Olfr697, Olfr698, Olfr699, Olfr700, Olfr701, Olfr702, Olfr703, Olfr704, Olfr705, Olfr706, Olfr707, Olfr708, Olfr709-ps1, Olfr710, LOC384651, Olfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik, Syt9, Olfml1
Downstream geneOvch2, LOC100042310, Olfr467, Olfr468-ps1, Olfr469, GA_x5J8B7W6B6J-2580381-2580079, Olfr470, Olfr471, LOC626661, Olfr472, Olfr473, LOC669301, Olfr474, Olfr476, Olfr477, LOC626732, Olfr478, Olfr479, Olfr480, Olfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490, LOC626881, Olfr491, Olfr492, Olfr493, Olfr494, Olfr495, Olfr496-ps1, Olfr497, Olfr498, Olfr499-ps1, Olfr500-ps1, Olfr501-ps1, Olfr502, LOC269980, Olfr503, Olfr504, Olfr505-ps1, Olfr506, Olfr507, Olfr508, Olfr509, Olfr510, Olfr511-ps1, Olfr512, Olfr513
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063B02.bB6Ng01-063B02.g
ACCDH883277DH883278
length1,1871,096
definitionDH883277|Mus musculus domesticus DNA, BAC clone: B6Ng01-063B02, 5' end.DH883278|Mus musculus domesticus DNA, BAC clone: B6Ng01-063B02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,740,967 - 114,742,154)(114,915,742 - 114,916,857)
sequence
gaattctagttcaattttggatgcactacttcgacaatactggtcagcag
ctaatttgtgtgtgtccataagtttgtgtggggatggtttctcctgaaat
acagatctatttatgattcattactgtttcaaatcccctggtgagggaga
aagaatgaatatataggtgacatgttttaaacgttaagacctataaagtg
tgtgactccatataagatatgacggtcacccctttgtgcacaaaagtaaa
gctaaaactctgggcttggattctcctgagtcactggttttcttgcttcc
tccttcctcttaggagttccacttcctttaccctttgctaccctagaatt
tcgttttgtttgtgcttgaaggcacctatgtgtgtttatttttagagtct
cgggaaggtgagctctgtctcgtataaactctgaagcggcagtctgttgc
gtctagtggttctcttcagggactgttattatctctaatacttgtgataa
aaagccttgtaggagatgggtaccctaaattaagctgatgagctttctgt
ggagacttccagaaggccccagacttctagaggcgttctgactcagcttt
gtctccagcaagctgaaaatttctctgtgctttaatgtccttggtttggt
gctccttcataagtaattcttgctttcctctcctctgtgcctctgtgcac
acttatgcacatgagagctaagcatccagtgtgtatgatgcttcttatta
cggtccatgttgtactgtagttttggcatgcaatatgtacatgtctgtaa
cacgtctgtagacacaggtgggataaaggctgcctctctgataagataat
ctttaatatccttgtgacattttttggccaattcattttctaactccatc
accactgctccttgaactgaggagtgttctgcctgtccttttgtgctctc
tgaggatgtatgcttcttggattataatggttggacattgctttttgctt
ggtcatgaattctgaaatacaaattttgtttatgctctttttttgcttaa
aaacccctgggtgaatccctcatgcagacacgagagagcgatacaaccgg
aagatgccaaattcaatggtggattacgccctgttagattttgtggccct
acgcagacatgacgctcatctactgtttcctctttcc
gaattctctgtctagctctgtactccatttttaattgggctatttggtta
tttggaggttaatttcttgagttcttcatatattttggatattagccctc
tatcggatgtagggttggtgaagatttttttttccaatctgtaggttgcc
aatttgtcctattgactatgtcttttggcttatagaatcttttcagtttc
atgaggtcccatttatcaattattgatcttatagcctgaaccattagtgt
tctgttcaggaaatttgaggctctttcccactttctcttctattccattc
agtgtatctggttttatgttgaggttcttgatccaactggactagagctt
tgtgcaaggtaacaaatctgctgacctggaactcactacgtagaccaggc
tgacctcaaattttaaaaggaactacttttactttaataacaggaattct
ttaagtagatgagaagtctaacaagctataatggctcaaaaatcccattt
ttacctctaaagcacactgaggtattgtattcccttcaccacagggatag
tatgaagagaagtaggtgatggcttcacttttgaagtaagtatctactag
aaaacctggtatttctgctctctcccaacacttctgggggcaaggaaaag
tcatctggtagcttgaaaaggtcttttccggatagactggctgtgatgac
taagaatcatcttgccaagtgtggtgttgtttgatcccatcatttggaag
gaagatgtaggtggttcagctagacaagctacacagagacccctatctca
aaaaaaaaaaaaaaaaaagtctgtatctgtagagaacattctaagttcat
ttaaagaaaattctcttaagaagtaaatgaatgttcctgtgtaaaagctt
tgtcttgatgttaaaaacgctgcttctggtgtgtaataagaggcatgtcc
tccatttttaatttcagacttcggtttcttcttgctctgcataagtttgg
ccatgttatgacaggaccagatggaagcttcacgactctgagatctcatc
tacctgggaagtgaggtcaaatcaataccccacatttttatctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_114740967_114742154
seq2: B6Ng01-063B02.b_44_1230

seq1  GAATTCTAGTTCAATTTTGGATGCACTACTTCGACAATACTGGTCAGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTTCAATTTTGGATGCACTACTTCGACAATACTGGTCAGCAG  50

seq1  CTAATTTGTGTGTGTCCATAAGTTTGTGTGGGGATGGTTTCTCCTGAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTGTGTGTGTCCATAAGTTTGTGTGGGGATGGTTTCTCCTGAAAT  100

seq1  ACAGATCTATTTATGATTCATTACTGTTTCAAATCCCCTGGTGAGGGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCTATTTATGATTCATTACTGTTTCAAATCCCCTGGTGAGGGAGA  150

seq1  AAGAATGAATATATAGGTGACATGTTTTAAACGTTAAGACCTATAAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGAATATATAGGTGACATGTTTTAAACGTTAAGACCTATAAAGTG  200

seq1  TGTGACTCCATATAAGATATGACGGTCACCCCTTTGTGCACAAAAGTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTCCATATAAGATATGACGGTCACCCCTTTGTGCACAAAAGTAAA  250

seq1  GCTAAAACTCTGGGCTTGGATTCTCCTGAGTCACTGGTTTTCTTGCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAACTCTGGGCTTGGATTCTCCTGAGTCACTGGTTTTCTTGCTTCC  300

seq1  TCCTTCCTCTTAGGAGTTCCACTTCCTTTACCCTTTGCTACCCTAGAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTCTTAGGAGTTCCACTTCCTTTACCCTTTGCTACCCTAGAATT  350

seq1  TCGTTTTGTTTGTGCTTGAAGGCACCTATGTGTGTTTATTTTTAGAGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTTGTTTGTGCTTGAAGGCACCTATGTGTGTTTATTTTTAGAGTCT  400

seq1  CGGGAAGGTGAGCTCTGTCTCGTATAAACTCTGAAGCGGCAGTCTGTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAAGGTGAGCTCTGTCTCGTATAAACTCTGAAGCGGCAGTCTGTTGC  450

seq1  GTCTAGTGGTTCTCTTCAGGGACTGTTATTATCTCTAATACTTGTGATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGTGGTTCTCTTCAGGGACTGTTATTATCTCTAATACTTGTGATAA  500

seq1  AAAGCCTTGTAGGAGATGGGTACCCTAAATTAAGCTGATGAGCTTTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTTGTAGGAGATGGGTACCCTAAATTAAGCTGATGAGCTTTCTGT  550

seq1  GGAGACTTCCAGAAGGCCCCAGACTTCTAGAGGCGTTCTGACTCAGCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACTTCCAGAAGGCCCCAGACTTCTAGAGGCGTTCTGACTCAGCTTT  600

seq1  GTCTCCAGCAAGCTGAAAATTTCTCTGTGCTTTAATGTCCTTGGTTTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCAGCAAGCTGAAAATTTCTCTGTGCTTTAATGTCCTTGGTTTGGT  650

seq1  GCTCCTTCATAAGTAATTCTTGCTTTCCTCTCCTCTGTGCCTCTGTGCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTCATAAGTAATTCTTGCTTTCCTCTCCTCTGTGCCTCTGTGCAC  700

seq1  ACTTATGCACATGAGAGCTAAGCATCCAGTGTGTATGATGCTTCTTATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATGCACATGAGAGCTAAGCATCCAGTGTGTATGATGCTTCTTATTA  750

seq1  CGGTCCATGTTGTACTGTAGTTTTGGCATGCAATATGTACATGTCTGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCCATGTTGTACTGTAGTTTTGGCATGCAATATGTACATGTCTGTAA  800

seq1  CACGTCTGTAGACACAGGTGGGAT-AAGGCTGCCTCTCTGATAAGATAAT  849
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CACGTCTGTAGACACAGGTGGGATAAAGGCTGCCTCTCTGATAAGATAAT  850

seq1  CTTTAATATCCTTGTGACATTTTTTGGCCAATTCATTTTCTAACTCCATC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATATCCTTGTGACATTTTTTGGCCAATTCATTTTCTAACTCCATC  900

seq1  ACCACTGCTCCTTGAACTGAGGAGTGTTCTGCCTGTCCTTTTGTGCCTCT  949
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACCACTGCTCCTTGAACTGAGGAGTGTTCTGCCTGTCCTTTTGTG-CTCT  949

seq1  CTGAGGATGTATGCTTCTTGGATTATAATGGTTGGACATTGCTTTTTGCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGATGTATGCTTCTTGGATTATAATGGTTGGACATTGCTTTTTGCT  999

seq1  TGGTCATGAA-TCTGAAATACAAA-TCTGTTTATGCTCTTTTTCTGCTTA  1047
      |||||||||| ||||||||||||| | |||||||||||||||| ||||||
seq2  TGGTCATGAATTCTGAAATACAAATTTTGTTTATGCTCTTTTTTTGCTTA  1049

seq1  AAAACCCCT-GGTGAATCCCTCAATGCAGAACACGAGAAGAGCGAATACA  1096
      ||||||||| |||||||||||| |||||| ||||||| |||||| |||| 
seq2  AAAACCCCTGGGTGAATCCCTC-ATGCAG-ACACGAG-AGAGCG-ATAC-  1094

seq1  AACAGAAAGATGCAAAATTCAAATGTTGATTACGCCCTG-TAGATTGTGT  1145
      ||| | ||||||| ||||||||  || |||||||||||| |||||| |||
seq2  AACCGGAAGATGCCAAATTCAATGGTGGATTACGCCCTGTTAGATTTTGT  1144

seq1  GCCCCTACGCAAGACATGACGCTCATC-ACTGTTTCCTCTTTCC  1188
      | |||||||| |||||||||||||||| ||||||||||||||||
seq2  GGCCCTACGC-AGACATGACGCTCATCTACTGTTTCCTCTTTCC  1187

seq1: chr7_114915742_114916857
seq2: B6Ng01-063B02.g_68_1163 (reverse)

seq1  GAGAGATGAATAATGTGGGGTATATTGATTAGACCTCACTTTCCCAAGTA  50
      ||||||| || |||||||||  |||||||| |||||||| |||||| || 
seq2  GAGAGAT-AAAAATGTGGGG--TATTGATTTGACCTCAC-TTCCCAGGT-  45

seq1  AGATGAGATCCTCAGAGTCTGTGAAGCTGTCCATCTTGGTCCTTGTTCTA  100
      ||||||||| ||||||||| |||||||| |||||| |||||| |||  ||
seq2  AGATGAGAT-CTCAGAGTC-GTGAAGCT-TCCATC-TGGTCC-TGTCATA  90

seq1  TACATGGCCAATACTAATGCAGAAGCAAGAGGAAAACCGAAGTCCTGAAA  150
       |||||||||| ||| |||||| ||||||| | |||||||||| ||||||
seq2  -ACATGGCCAA-ACTTATGCAG-AGCAAGAAG-AAACCGAAGT-CTGAAA  135

seq1  TTAGAAATGGAGGACATGCCTCTTATTTCACACCAGAAGCAGCGTTTCTA  200
      ||| ||||||||||||||||||||||| ||||||||||||||||||| | 
seq2  TTAAAAATGGAGGACATGCCTCTTATTACACACCAGAAGCAGCGTTT-TT  184

seq1  AACATCAAGACAAAGCTTTTTACACAGGAACATTCATTTACTTCTTAAGA  250
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AACATCAAGACAAAGC-TTTTACACAGGAACATTCATTTACTTCTTAAGA  233

seq1  GAATTTTCTTTAAATG-ACTTAGAATGTTCTCTACAGATACAGAACTTTT  299
      |||||||||||||||| |||||||||||||||||||||||||||   |||
seq2  GAATTTTCTTTAAATGAACTTAGAATGTTCTCTACAGATACAGA--CTTT  281

seq1  TTTTTTTTTTTTTTTTGAGATAGGGGTCTCTGTGTAGCCTTGTCTAGCCT  349
      ||||||||||||||||||||||||||||||||||||| ||||||||| ||
seq2  TTTTTTTTTTTTTTTTGAGATAGGGGTCTCTGTGTAG-CTTGTCTAG-CT  329

seq1  GAACCACCTACATCTTCCTTCCAAATGATGGGATCAAACAACACCACACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCACCTACATCTTCCTTCCAAATGATGGGATCAAACAACACCACACT  379

seq1  TGGCAAGATGATTCTTAGTCATCACAGCCAGTCTATCCGGAAAAGACCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGATGATTCTTAGTCATCACAGCCAGTCTATCCGGAAAAGACCTT  429

seq1  TTCAAGCTACCAGATGACTTTTCCTTGCCCCCAGAAGTGTTGGGAGAGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGCTACCAGATGACTTTTCCTTGCCCCCAGAAGTGTTGGGAGAGAG  479

seq1  CAGAAATACCAGGTTTTCTAGTAGATACTTACTTCAAAAGTGAAGCCATC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATACCAGGTTTTCTAGTAGATACTTACTTCAAAAGTGAAGCCATC  529

seq1  ACCTACTTCTCTTCATACTATCCCTGTGGTGAAGGGAATACAATACCTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTTCTCTTCATACTATCCCTGTGGTGAAGGGAATACAATACCTCA  579

seq1  GTGTGCTTTAGAGGTAAAAATGGGATTTTTGAGCCATTATAGCTTGTTAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTTTAGAGGTAAAAATGGGATTTTTGAGCCATTATAGCTTGTTAG  629

seq1  ACTTCTCATCTACTTAAAGAATTCCTGTTATTAAAGTAAAAGTAGTTCCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCATCTACTTAAAGAATTCCTGTTATTAAAGTAAAAGTAGTTCCT  679

seq1  TTTAAAATTTGAGGTCAGCCTGGTCTACGTAGTGAGTTCCAGGTCAGCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATTTGAGGTCAGCCTGGTCTACGTAGTGAGTTCCAGGTCAGCAG  729

seq1  ATTTGTTACCTTGCACAAAGCTCTAGTCCAGTTGGATCAAGAACCTCAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTACCTTGCACAAAGCTCTAGTCCAGTTGGATCAAGAACCTCAAC  779

seq1  ATAAAACCAGATACACTGAATGGAATAGAAGAGAAAGTGGGAAAGAGCCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACCAGATACACTGAATGGAATAGAAGAGAAAGTGGGAAAGAGCCT  829

seq1  CAAATTTCCTGAACAGAACACTAATGGTTCAGGCTATAAGATCAATAATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTCCTGAACAGAACACTAATGGTTCAGGCTATAAGATCAATAATT  879

seq1  GATAAATGGGACCTCATGAAACTGAAAAGATTCTATAAGCCAAAAGACAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATGGGACCTCATGAAACTGAAAAGATTCTATAAGCCAAAAGACAT  929

seq1  AGTCAATAGGACAAATTGGCAACCTACAGATTGGAAAAAAAAATCTTCAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATAGGACAAATTGGCAACCTACAGATTGGAAAAAAAAATCTTCAC  979

seq1  CAACCCTACATCCGATAGAGGGCTAATATCCAAAATATATGAAGAACTCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCTACATCCGATAGAGGGCTAATATCCAAAATATATGAAGAACTCA  1029

seq1  AGAAATTAACCTCCAAATAACCAAATAGCCCAATTAAAAATGGAGTACAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTAACCTCCAAATAACCAAATAGCCCAATTAAAAATGGAGTACAG  1079

seq1  AGCTAGACAGAGAATTC  1116
      |||||||||||||||||
seq2  AGCTAGACAGAGAATTC  1096