BAC Information

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BAC

Clone NameB6Ng01-063C21
Chromosome7 (Build37)
Map Location 63,963,562 - 63,964,488
singlet/doubletsinglet
Overlap genenone
Upstream geneSiglech, Tubgcp5, Cyfip1, Nipa2, Nipa1, LOC672959, Herc2, p
Downstream geneLOC100040839, Gabrg3, Gabra5, Gabrb3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063C21.bB6Ng01-063C21.g
ACCDH883353DH883354
length9271,140
definitionDH883353|Mus musculus domesticus DNA, BAC clone: B6Ng01-063C21, 5' end.DH883354|Mus musculus domesticus DNA, BAC clone: B6Ng01-063C21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaatgtaattattttatgtgcacagttcttaggcttcatcaatg
aattctatcattgagggggtcagttgaaagcaaagaaaatagactctccc
aaagtctggatgatggttactgtgtgtatatgtatgcacaggcatgtatg
tgaatcacagctagaatgtcttctctctatatctcagcaaatttgagact
tccaaattatttttcaatgattttctgcataatatctgagttggtaccag
gaagtttaattttaaagagaagaataaaaagaaaaaggctcagaagtcat
gattattccaattggatcagatctctgcctcagcaccatcttctggagag
agttctttctctgagaaacttcctactcttgtgaacaaacagaagttgtg
tggctataataggggattgaaacagtactgggaaggctgtcctgaagact
ccctgtgtctgggattgcactcctgctcatctcattggtagatgaaggca
gacttgagtagattcagctcctctcatactttgttcctctttgtttctta
gaggtaagaagatgctcagaatgacagctccctgggccagtgcacctcca
cagctgcatgtctggatgtggctgtccctgtagaaactcagtggaccata
gtttaaaagcattaggactctcagcctttgttactggtttattgctctca
ggaaatatgtgcttatgtcctttatgctccctgttttctagagagctctt
tagttctcatttgtggaatgtagctacatttttttttatcagtgcatcat
cttcactgtgattgctgttggagcttccttccctccttcccttcctacct
agaaatggatcagacatattttggcatggttttacatgctttctgtgtaa
cttgaaattctgtgtgtgtgtgtgtgt
gaattctcacctgaggaataccgaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatcaacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggctcagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
tgaggagctagagaagtagccagagctaaagggatctgcaccctatagtg
gaacaacatatgagctacagtacccgagctctgactctagctgcatatta
ttcaagatggctagtcgcatcctgaaaaaagccatggaactgcaacttta
ttgcccagtcaggatacagggccaaatgggatgggcgcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_63963562_63964488
seq2: B6Ng01-063C21.b_47_973

seq1  GAATTCAAATGTAATTATTTTATGTGCACAGTTCTTAGGCTTCATCAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATGTAATTATTTTATGTGCACAGTTCTTAGGCTTCATCAATG  50

seq1  AATTCTATCATTGAGGGGGTCAGTTGAAAGCAAAGAAAATAGACTCTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTATCATTGAGGGGGTCAGTTGAAAGCAAAGAAAATAGACTCTCCC  100

seq1  AAAGTCTGGATGATGGTTACTGTGTGTATATGTATGCACAGGCATGTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTGGATGATGGTTACTGTGTGTATATGTATGCACAGGCATGTATG  150

seq1  TGAATCACAGCTAGAATGTCTTCTCTCTATATCTCAGCAAATTTGAGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCACAGCTAGAATGTCTTCTCTCTATATCTCAGCAAATTTGAGACT  200

seq1  TCCAAATTATTTTTCAATGATTTTCTGCATAATATCTGAGTTGGTACCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATTATTTTTCAATGATTTTCTGCATAATATCTGAGTTGGTACCAG  250

seq1  GAAGTTTAATTTTAAAGAGAAGAATAAAAAGAAAAAGGCTCAGAAGTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTAATTTTAAAGAGAAGAATAAAAAGAAAAAGGCTCAGAAGTCAT  300

seq1  GATTATTCCAATTGGATCAGATCTCTGCCTCAGCACCATCTTCTGGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTCCAATTGGATCAGATCTCTGCCTCAGCACCATCTTCTGGAGAG  350

seq1  AGTTCTTTCTCTGAGAAACTTCCTACTCTTGTGAACAAACAGAAGTTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTCTCTGAGAAACTTCCTACTCTTGTGAACAAACAGAAGTTGTG  400

seq1  TGGCTATAATAGGGGATTGAAACAGTACTGGGAAGGCTGTCCTGAAGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATAATAGGGGATTGAAACAGTACTGGGAAGGCTGTCCTGAAGACT  450

seq1  CCCTGTGTCTGGGATTGCACTCCTGCTCATCTCATTGGTAGATGAAGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGTCTGGGATTGCACTCCTGCTCATCTCATTGGTAGATGAAGGCA  500

seq1  GACTTGAGTAGATTCAGCTCCTCTCATACTTTGTTCCTCTTTGTTTCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGAGTAGATTCAGCTCCTCTCATACTTTGTTCCTCTTTGTTTCTTA  550

seq1  GAGGTAAGAAGATGCTCAGAATGACAGCTCCCTGGGCCAGTGCACCTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAAGAAGATGCTCAGAATGACAGCTCCCTGGGCCAGTGCACCTCCA  600

seq1  CAGCTGCATGTCTGGATGTGGCTGTCCCTGTAGAAACTCAGTGGACCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCATGTCTGGATGTGGCTGTCCCTGTAGAAACTCAGTGGACCATA  650

seq1  GTTTAAAAGCATTAGGACTCTCAGCCTTTGTTACTGGTTTATTGCTCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAAGCATTAGGACTCTCAGCCTTTGTTACTGGTTTATTGCTCTCA  700

seq1  GGAAATATGTGCTTATGTCCTTTATGCTCCCTGTTTTCTAGAGAGCTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATATGTGCTTATGTCCTTTATGCTCCCTGTTTTCTAGAGAGCTCTT  750

seq1  TAGTTCTCATTTGTGGAATGTAGCTACATTTTTTTTTATCAGTGCATCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTCATTTGTGGAATGTAGCTACATTTTTTTTTATCAGTGCATCAT  800

seq1  CTTCACTGTGATTGCTGTTGGAGCTTCCTTCCCTCCTTCCCTTCCTACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTGTGATTGCTGTTGGAGCTTCCTTCCCTCCTTCCCTTCCTACCT  850

seq1  AGAAATGGATCAGACATATTTTGGCATGGTTTTACATGCTTTCTGTGTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGGATCAGACATATTTTGGCATGGTTTTACATGCTTTCTGTGTAA  900

seq1  CTTGAAATTCTGTGTGTGTGTGTGTGT  927
      |||||||||||||||||||||||||||
seq2  CTTGAAATTCTGTGTGTGTGTGTGTGT  927