BAC Information

Click to search

BAC

Clone NameB6Ng01-063E19
Chromosome7 (Build37)
Map Location 141,794,084 - 141,935,891
singlet/doubletdoublet
Overlap geneLOC668750, Dock1
Upstream geneLOC100043237, 2700050L05Rik, Mmp21, Uros, Bccip, Dhx32, LOC100043695, Fank1, Adam12, A130023I24Rik, 4933400E14Rik, LOC100043248, LOC100043699
Downstream geneB830028B13Rik, EG668693, LOC100043254, Foxi2, Clrn3, Ptpre, Mki67
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063E19.bB6Ng01-063E19.g
ACCDH883437DH883438
length1,130481
definitionDH883437|Mus musculus domesticus DNA, BAC clone: B6Ng01-063E19, 5' end.DH883438|Mus musculus domesticus DNA, BAC clone: B6Ng01-063E19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,934,744 - 141,935,891)(141,794,084 - 141,794,570)
sequence
gaattctagaataccaagaatccagagcatggagagcatgaaccaagaga
gggggtcccctagcacagtgtcaggcccagccacagagcagatgaaatgc
ctcagaaactgggacccatccacagatatcagagaatgccattctgtggc
atggctttctgtaattcaaaatatgtcacactgggagaaagaaaatgact
cagtgttacctatatttcaataaagccttcaccttccaatagaccttcaa
agtccaagtgaagtatgcatgactaacaactgtggaagatgcgggtcatt
agagcccattctgcaccctcacatgtatacgacccatgggtacatgatgg
cagaaagcctctgaaggatcgaggtctatgtaacaactttcactaacagg
acaaagcctctcaaatctcaccaactcatcccaaccctgaacctgctcta
agactcaagaccaagaccatgggtcagcattttatgaatgatgtcagtga
tgtatgggtggggtcagctctgatgtgggcgtggtcaatgaattgtaggt
gctgtgggtgagctcctggaggcccaggctaaaggcctgacaagctatac
ctggtgaggccaccttgaggaagatatatatcaggccctttgccagccca
ccatgagtatcatgtgatgtcattgtcacctcagtccagatagaaaatct
ggtcagacccacttcacaaaacagaaaaccgaagctcagtgaggtcagtt
atgtagttcggataaaagatagaaagaagatggggtggcaatattctcac
cacaacatcatcaccatatgaggtagcctgtcagtcacagcaacagtcta
catgggtctctgcaaccaatacacagttggttctgttgtggagtgttggc
ttcaccataacaaggtagagactagtcccagagatggcaaagggtctaaa
gaaggggatggccacctccctgtgaatcagagtgtgttgcgtgttgttgt
ggctgtctgtatctatttgtgtatgtgatgtacagcagtctcttgaaggt
atagttgtgacctgtcctgtgatccagtaaaggtatgcatgtttttctct
ggttttacacgcctctttgtaaagaacagt
atatcatttccatttagcggaaagagttctcaggtcataaacacaatggt
tcttcattccaccacagccaactgtggaaaacataatagagacctaatga
cccatcttgcttaatcaaagcgaggatttttttttttttacttccagaag
cctctgccatgtaaattgtagaagccaaacataacctgatgtcacagccc
acacacaaggcagggttcatccacctttatgaagcgctcagctttgaaga
ttgcaagtgctttgagccaatgactttgaactcaggaaagcgaagcattt
cctccatgaagtcatgagtgtggcattcattatgaggcatgattaacctc
tctcgccgtgtcacatctcacagacaataaaggatttggctctctgattt
tgacattagtgtctctcctccagtgttaaatatcagtctcaggctcttgc
tgcagtagggttgggatggaggtgagggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_141934744_141935891
seq2: B6Ng01-063E19.b_48_1177 (reverse)

seq1  ACTGTTTCTTTACAAAGATGGCTGTGTAAAACACAGAGACAAACATGCAT  50
      |||| ||||||||||||| ||| ||||||||| |||||| ||||||||||
seq2  ACTG-TTCTTTACAAAGA-GGC-GTGTAAAAC-CAGAGAAAAACATGCAT  46

seq1  ACACCTTTACTCGGATTCACCAGACAGGTCCACAACCATACCTATCCATA  100
        ||||||||| ||| ||||  ||||||| |||||| |||||| || | |
seq2  --ACCTTTACT-GGA-TCACAGGACAGGT-CACAACTATACCT-TCAAGA  90

seq1  GAAACCTGCTTGTACATACACATACACACATAGATACAGACAGACACACA  150
      ||   |||| ||||||| |||||||||| |||||||||||||| ||||  
seq2  GA---CTGC-TGTACAT-CACATACACAAATAGATACAGACAGCCACAAC  135

seq1  CACACGC-ACACACTCTGATTTCACAGGGAGGTGGCCATCCCCTTCTTTA  199
       |||||| ||||||||||| ||||||||||||||||||||||||||||||
seq2  AACACGCAACACACTCTGA-TTCACAGGGAGGTGGCCATCCCCTTCTTTA  184

seq1  GACCCTTTGCCATCTCTTGGGACTAGTCTCTAACCTTGTTATGGTGAAGC  249
      |||||||||||||||| |||||||||||||| ||||||||||||||||||
seq2  GACCCTTTGCCATCTC-TGGGACTAGTCTCT-ACCTTGTTATGGTGAAGC  232

seq1  CAACACTCCACAACAGAACCAACTGTGTATTGGTTGCAGAGACCCATGTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACTCCACAACAGAACCAACTGTGTATTGGTTGCAGAGACCCATGTA  282

seq1  GACTGGTTGCTGTGACTGACAGGCTACCTCATATGGTGATGATGTTGTGG  349
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GACT-GTTGCTGTGACTGACAGGCTACCTCATATGGTGATGATGTTGTGG  331

seq1  TGAGAATATTGCCACCCCATCTTCTTTCTATCTTTTATCCGAACTACATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATATTGCCACCCCATCTTCTTTCTATCTTTTATCCGAACTACATA  381

seq1  ACTGACCTCACTGAGCTTCGGTTTTCTGTTTTGTGAAGTGGGTCTGACCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACCTCACTGAGCTTCGGTTTTCTGTTTTGTGAAGTGGGTCTGACCA  431

seq1  GATTTTCTATCTGGACTGAGGTGACAATGACATCACATGATACTCATGGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTATCTGGACTGAGGTGACAATGACATCACATGATACTCATGGT  481

seq1  GGGCTGGCAAAGGGCCTGATATATATCTTCCTCAAGGTGGCCTCACCAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGCAAAGGGCCTGATATATATCTTCCTCAAGGTGGCCTCACCAGG  531

seq1  TATAGCTTGTCAGGCCTTTAGCCTGGGCCTCCAGGAGCTCACCCACAGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTTGTCAGGCCTTTAGCCTGGGCCTCCAGGAGCTCACCCACAGCA  581

seq1  CCTACAATTCATTGACCACGCCCACATCAGAGCTGACCCCACCCATACAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAATTCATTGACCACGCCCACATCAGAGCTGACCCCACCCATACAT  631

seq1  CACTGACATCATTCATAAAATGCTGACCCATGGTCTTGGTCTTGAGTCTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGACATCATTCATAAAATGCTGACCCATGGTCTTGGTCTTGAGTCTT  681

seq1  AGAGCAGGTTCAGGGTTGGGATGAGTTGGTGAGATTTGAGAGGCTTTGTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGGTTCAGGGTTGGGATGAGTTGGTGAGATTTGAGAGGCTTTGTC  731

seq1  CTGTTAGTGAAAGTTGTTACATAGACCTCGATCCTTCAGAGGCTTTCTGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAGTGAAAGTTGTTACATAGACCTCGATCCTTCAGAGGCTTTCTGC  781

seq1  CATCATGTACCCATGGGTCGTATACATGTGAGGGTGCAGAATGGGCTCTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGTACCCATGGGTCGTATACATGTGAGGGTGCAGAATGGGCTCTA  831

seq1  ATGACCCGCATCTTCCACAGTTGTTAGTCATGCATACTTCACTTGGACTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCCGCATCTTCCACAGTTGTTAGTCATGCATACTTCACTTGGACTT  881

seq1  TGAAGGTCTATTGGAAGGTGAAGGCTTTATTGAAATATAGGTAACACTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTCTATTGGAAGGTGAAGGCTTTATTGAAATATAGGTAACACTGA  931

seq1  GTCATTTTCTTTCTCCCAGTGTGACATATTTTGAATTACAGAAAGCCATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTTCTTTCTCCCAGTGTGACATATTTTGAATTACAGAAAGCCATG  981

seq1  CCACAGAATGGCATTCTCTGATATCTGTGGATGGGTCCCAGTTTCTGAGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAATGGCATTCTCTGATATCTGTGGATGGGTCCCAGTTTCTGAGG  1031

seq1  CATTTCATCTGCTCTGTGGCTGGGCCTGACACTGTGCTAGGGGACCCCCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCATCTGCTCTGTGGCTGGGCCTGACACTGTGCTAGGGGACCCCCT  1081

seq1  CTCTTGGTTCATGCTCTCCATGCTCTGGATTCTTGGTATTCTAGAATTC  1148
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGGTTCATGCTCTCCATGCTCTGGATTCTTGGTATTCTAGAATTC  1130

seq1: chr7_141794084_141794570
seq2: B6Ng01-063E19.g_70_556

seq1  GAATTCATATCATTTCCATTTAGCGGAAAGAGTTCTCAGGTCATAAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATCATTTCCATTTAGCGGAAAGAGTTCTCAGGTCATAAACAC  50

seq1  AATGGTTCTTCATTCCACCACAGCCAACTGTGGAAAACATAATAGAGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTCTTCATTCCACCACAGCCAACTGTGGAAAACATAATAGAGACC  100

seq1  TAATGACCCATCTTGCTTAATCAAAGCGAGGATTTTTTTTTTTTTACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACCCATCTTGCTTAATCAAAGCGAGGATTTTTTTTTTTTTACTTC  150

seq1  CAGAAGCCTCTGCCATGTAAATTGTAGAAGCCAAACATAACCTGATGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCCTCTGCCATGTAAATTGTAGAAGCCAAACATAACCTGATGTCA  200

seq1  CAGCCCACACACAAGGCAGGGTTCATCCACCTTTATGAAGCGCTCAGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCACACACAAGGCAGGGTTCATCCACCTTTATGAAGCGCTCAGCTT  250

seq1  TGAAGATTGCAAGTGCTTTGAGCCAATGACTTTGAACTCAGGAAAGCGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATTGCAAGTGCTTTGAGCCAATGACTTTGAACTCAGGAAAGCGAA  300

seq1  GCATTTCCTCCATGAAGTCATGAGTGTGGCATTCATTATGAGGCATGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCCTCCATGAAGTCATGAGTGTGGCATTCATTATGAGGCATGATT  350

seq1  AACCTCTCTCGCCGTGTCACATCTCACAGACAATAAAGGATTTGGCTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTCTCGCCGTGTCACATCTCACAGACAATAAAGGATTTGGCTCTC  400

seq1  TGATTTTGACATTAGTGTCTCTCCTCCAGTGTTAAATATCAGTCTCAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTGACATTAGTGTCTCTCCTCCAGTGTTAAATATCAGTCTCAGGC  450

seq1  TCTTGCTGCAGTAGGGTTGGGATGGAGGTGAGGGAGT  487
      |||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTGCAGTAGGGTTGGGATGGAGGTGAGGGAGT  487