BAC Information

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BAC

Clone NameB6Ng01-063K01
Chromosome7 (Build37)
Map Location 112,250,916 - 112,251,567
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1
Downstream geneOlfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063K01.bB6Ng01-063K01.g
ACCDH883663DH883664
length1,270927
definitionDH883663|Mus musculus domesticus DNA, BAC clone: B6Ng01-063K01, 5' end.DH883664|Mus musculus domesticus DNA, BAC clone: B6Ng01-063K01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacataaaacccgagacactgaaacttatagaggtgaaaagtag
ggaaaaccctcgaagatatgggcacaggggaaaaattcctgaatagaaca
gcaatggcttgtgctgtaagatcgagaatcgacaaatgggacctcagaaa
attgcaaagcttctgcaagacaaaagacaccatcaataagacaaaaaggc
caccaacagattggaaaaggatctttacctctcctaaatcagatagggaa
ctaatatcctatatatatgaagaactaaaaaaggtggactccagaaaaac
atttaaccccattaaaaaatgtggctcagaggtaaacaaagaattctcac
ctgaggaatgctgaatggctgagaagcacctgaacaaatgttcaacatcc
ttaatcatcagggaaatgcaactcaaaacaaccctgagattccacctcac
accatgcagaatggctatatcaaaaatttaggtgacagcagatgctggcc
aggatgtggagaaagaggaacagtcctccattggtgggattgcaagcttg
tacaaccactctggaaatcagtctggcagttcctaataaaattggacata
gtacctctcctgggcatatatccagaagatgttccaactggtaagaagga
catatgctccactatgttcatagcagccttatttataatagccagaagct
ggaaagaacccagatgcccctcaacagaggaatggatacagaaaatgtgg
tatatttacacaacggagtactactcagctattaaaaagagtgagtttat
gaaattgctaggcaaatgtatgtacctggagggcatcatcctgagtgagg
taacccaatcacaaaagaactcacatgatatgtactcactgataagtgga
tattagcccagaaacttagaatacccaagatataagatacatatgcaaaa
cacatgtaactcagaagatgacgaccaaagtgtgatatttagcccttctt
agaattgggaacaaaatacccatggagagttacaagacaattttggagca
gagaggaaagatggactatctaaggactgtcatatctgggatccatccat
aatcagcctccaatgctgacaccattgcatacctacaagatttgcgaaga
accgaattagctgtctcttttggaacattgtagcctagcaacacataagt
gagttcagtgctatagtagatcagcgcatggaactggaagtcccattgga
ctggattgcacctattttga
gaattcatgttgctaggttctcatgtccagcacctttacgtgatttctcc
tatttgatgaaatttaggttgcttctggtaagtgatttaagcctcaattc
tctcttcctctttgtacttaaatgtactgcctctccttcatcattggtgt
atagggcacaaagttcctgtgctcaaagacaagcaggaaggtaaccagtt
atgttaaatgctcagggttgtctcttcaaataaagaggtatataccctgt
tttctgaacagaaggctggggttgaatgagcttagtagcctggtgacctt
tttggtatctgaatggccagggcttcccctgactgataaacaggaccata
gatagttacaggccaaggtgaccttggtgctacctgtaggtccaggctat
acctgctcctccagacccttacaaacaggaccagaaatggttgacagcct
agagaccacatcagatcttctcttggctcttaagatgatacatgtaattt
atctgtagaatctgtgatcatggaagaagtgacatgccctttgaaaagag
tatcactgtaattgtgccctaagctttatcgtccacaggaaattgtgttg
tagacacattttccaaactgcaacatattcaaatgtgtctaaaataaact
gtctgctgtcagaatcataaagtttgaagccactggctactgagtcatgt
ggagcctggcttccttctcacctcatgttggattgatactgttggctgtg
gtgcttgcagagaccccctccccacacatttgaaagtatctagatttgtg
ttagtatgaatataggcaaatagttaggcttttgtagctacaagacctta
gagctctttgcattacctgtcacccaaagcatttataatattattatata
taattatatattattatatatatatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_112250916_112251567
seq2: B6Ng01-063K01.g_65_716 (reverse)

seq1  ACAGTTTATTTTAGACACATTTGAATATGTTGCAGTTTGGAAAATGTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTATTTTAGACACATTTGAATATGTTGCAGTTTGGAAAATGTGTC  50

seq1  TACAACACAATTTCCTGTGGACGATAAAGCTTAGGGCACAATTACAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACACAATTTCCTGTGGACGATAAAGCTTAGGGCACAATTACAGTGA  100

seq1  TACTCTTTTCAAAGGGCATGTCACTTCTTCCATGATCACAGATTCTACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTTTCAAAGGGCATGTCACTTCTTCCATGATCACAGATTCTACAG  150

seq1  ATAAATTACATGTATCATCTTAAGAGCCAAGAGAAGATCTGATGTGGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTACATGTATCATCTTAAGAGCCAAGAGAAGATCTGATGTGGTCT  200

seq1  CTAGGCTGTCAACCATTTCTGGTCCTGTTTGTAAGGGTCTGGAGGAGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCTGTCAACCATTTCTGGTCCTGTTTGTAAGGGTCTGGAGGAGCAG  250

seq1  GTATAGCCTGGACCTACAGGTAGCACCAAGGTCACCTTGGCCTGTAACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGCCTGGACCTACAGGTAGCACCAAGGTCACCTTGGCCTGTAACTA  300

seq1  TCTATGGTCCTGTTTATCAGTCAGGGGAAGCCCTGGCCATTCAGATACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGGTCCTGTTTATCAGTCAGGGGAAGCCCTGGCCATTCAGATACCA  350

seq1  AAAAGGTCACCAGGCTACTAAGCTCATTCAACCCCAGCCTTCTGTTCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTCACCAGGCTACTAAGCTCATTCAACCCCAGCCTTCTGTTCAGA  400

seq1  AAACAGGGTATATACCTCTTTATTTGAAGAGACAACCCTGAGCATTTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGGTATATACCTCTTTATTTGAAGAGACAACCCTGAGCATTTAAC  450

seq1  ATAACTGGTTACCTTCCTGCTTGTCTTTGAGCACAGGAACTTTGTGCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGGTTACCTTCCTGCTTGTCTTTGAGCACAGGAACTTTGTGCCCT  500

seq1  ATACACCAATGATGAAGGAGAGGCAGTACATTTAAGTACAAAGAGGAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACCAATGATGAAGGAGAGGCAGTACATTTAAGTACAAAGAGGAAGA  550

seq1  GAGAATTGAGGCTTAAATCACTTACCAGAAGCAACCTAAATTTCATCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTGAGGCTTAAATCACTTACCAGAAGCAACCTAAATTTCATCAAA  600

seq1  TAGGAGAAATCACGTAAAGGTGCTGGACATGAGAACCTAGCAACATGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAAATCACGTAAAGGTGCTGGACATGAGAACCTAGCAACATGAAT  650

seq1  TC  652
      ||
seq2  TC  652