BAC Information

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BAC

Clone NameB6Ng01-063O19
Chromosome7 (Build37)
Map Location 98,811,376 - 98,918,987
singlet/doubletdoublet
Overlap geneDlg2
Upstream geneLOC666689, LOC621816, LOC100039943
Downstream geneCcdc90b, Ankrd42, Pcf11, LOC676240, LOC100040007, 4632427E13Rik, Rab30
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063O19.bB6Ng01-063O19.g
ACCDH883870DH883871
length1,138571
definitionDH883870|Mus musculus domesticus DNA, BAC clone: B6Ng01-063O19, 5' end.DH883871|Mus musculus domesticus DNA, BAC clone: B6Ng01-063O19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,811,376 - 98,812,529)(98,918,411 - 98,918,987)
sequence
gaattcctgcctcatccatcatcaatgaggaaaaactaagtgtcaaagtt
cattacaatgctttattacattgcaagaaaacacagacaggtgttagaag
aaaaaatgccattagagttcaaaaatttatactcaatgaagatatgttca
acctctaagtagacacagtagagattcgtcagggaaggagaggaggctct
cgtccctacctttgcatagaggactgaaataggatctgagagtgatggtg
actgcagaggccagtcattcaccataagatcagaacagtctatgtgcaaa
ctttattgaaagaactcaaattgacattacaagaaaacaacttatattca
cagtctcatttttcaaccaccttgcaacattgaatctacatttcttaagt
cataagaaaaaaaacaatgattaaaactaaacctgttgacagtgtatcat
tttcagctatctctgctgtttacagcttggtacggtgtcataatggtatc
ttaaaatgtaccaagttgtaataaagataaaacagctatctgggagcaat
gtcagaattacagcagttgtcctgaattgaagtaggatgtttggtacaca
tgattccatgacaggctttgctgataggtattagctttattataggaaga
aggtgaaaagggaattctgggtataaaataaaggatgaccccaattatcc
agaagcctgcagtatggtagtgcagacaaatttgtccacatataaagctc
acgttatgggagaaagttcaacatcaggggagactcccccgtcttgtctc
tctatgtgccatttcattactgtatgcatctgtgtatttaatacctctac
tctcactagaatttttcatgtctatagcttcatagcacaatttctggtat
gaaataggcattcactaaatatgtactaaatcaaatgaacacatctaaag
caaatttgtgtggagccaccaagagatgattattaaatgtaatttgaata
cactggccactgcaagccataggtctaacttattaacttgtcacatcttc
tgaagagaggaaattattagctggaggagggcttcgtttgccctaatcca
cattttgcctaggctaatcctcaaatgaaatacctctg
aaacactgtacttactgtcactattttcagaggtaggagatgtgtgattc
ccatctgatagcctgtgctttcacgttagaaccacactattttgttcttt
attaacagaagttggaggaaggattgaggaacctgaaggggactgggact
ccacaagaagaccaccagattcaactaaatgggggtcacagagaccaaac
taccaactgaagagtataaaagggctggacctagccccaccccacatatg
gagcagacatgaatcttggtcttcatgtgggtcctcaaaaaactggagcg
gagactctgttgcttgcctgtggatcctgttcccacaatggaactctctt
ggttggactgagggtgagaggatgtacctagtcctgcagtgacttgaggt
gtcaaagtggattggtacccagtgaggaatcttactattttcagagatca
aggggagggagggatgagggtcagggtgtgtgagggacgctgtgattgca
atgcaaatgaatcaataattaaattgagaggaaaatacataattcaacat
tattaaaactctaaagaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_98811376_98812529
seq2: B6Ng01-063O19.b_49_1186

seq1  GAATTCCTGCCTCATCCATCATCAATGAGGAAAAACTAAGTGTCAAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCCTCATCCATCATCAATGAGGAAAAACTAAGTGTCAAAGTT  50

seq1  CATTACAATGCTTTATTACATTGCAAGAAAACACAGACAGGTGTTAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAATGCTTTATTACATTGCAAGAAAACACAGACAGGTGTTAGAAG  100

seq1  AAAAAATGCCATTAGAGTTCAAAAATTTATACTCAATGAAGATATGTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGCCATTAGAGTTCAAAAATTTATACTCAATGAAGATATGTTCA  150

seq1  ACCTCTAAGTAGACACAGTAGAGATTCGTCAGGGAAGGAGAGGAGGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTAAGTAGACACAGTAGAGATTCGTCAGGGAAGGAGAGGAGGCTCT  200

seq1  CGTCCCTACCTTTGCATAGAGGACTGAAATAGGATCTGAGAGTGATGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCCTACCTTTGCATAGAGGACTGAAATAGGATCTGAGAGTGATGGTG  250

seq1  ACTGCAGAGGCCAGTCATTCACCATAAGATCAGAACAGTCTATGTGCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGAGGCCAGTCATTCACCATAAGATCAGAACAGTCTATGTGCAAA  300

seq1  CTTTATTGAAAGAACTCAAATTGACATTACAAGAAAACAACTTATATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTGAAAGAACTCAAATTGACATTACAAGAAAACAACTTATATTCA  350

seq1  CAGTCTCATTTTTCAACCACCTTGCAACATTGAATCTACATTTCTTAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCATTTTTCAACCACCTTGCAACATTGAATCTACATTTCTTAAGT  400

seq1  CATAAGAAAAAAAACAATGATTAAAACTAAACCTGTTGACAGTGTATCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGAAAAAAAACAATGATTAAAACTAAACCTGTTGACAGTGTATCAT  450

seq1  TTTCAGCTATCTCTGCTGTTTACAGCTTGGTACGGTGTCATAATGGTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCTATCTCTGCTGTTTACAGCTTGGTACGGTGTCATAATGGTATC  500

seq1  TTAAAATGTACCAAGTTGTAATAAAGATAAAACAGCTATCTGGGAGCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGTACCAAGTTGTAATAAAGATAAAACAGCTATCTGGGAGCAAT  550

seq1  GTCAGAATTACAGCAGTTGTCCTGAATTGAAGTAGGATGTTTGGTACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAATTACAGCAGTTGTCCTGAATTGAAGTAGGATGTTTGGTACACA  600

seq1  TGATTCCATGACAGGCTTTGCTGATAGGTATTAGCTTTATTATAGGAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCATGACAGGCTTTGCTGATAGGTATTAGCTTTATTATAGGAAGA  650

seq1  AGGTGAAAAGGGAATTCTGGGTATAAAATAAAGGATGACCCCAATTATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAAAAGGGAATTCTGGGTATAAAATAAAGGATGACCCCAATTATCC  700

seq1  AGAAGCCTGCAGTATGGTAGTGCAGACAAATTTGTCCACATATAAAGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCTGCAGTATGGTAGTGCAGACAAATTTGTCCACATATAAAGCTC  750

seq1  ACGTTATGGGAGAAAGTTCAACATCAGGGGAGACTCCCCCGTCTTGTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTATGGGAGAAAGTTCAACATCAGGGGAGACTCCCCCGTCTTGTCTC  800

seq1  TCTATGTGCCATTTCATTACTGTATGCATCTGTGTATTTAATACCTCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTGCCATTTCATTACTGTATGCATCTGTGTATTTAATACCTCTAC  850

seq1  TCTCACTAGAATTTTTTCATGTCTATAGCTTCATAGCACAATTTCTGGTA  900
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTAGAA-TTTTTCATGTCTATAGCTTCATAGCACAATTTCTGGTA  899

seq1  TGAAATAGGCATTCACTAAATATGTACTAAATCAAATGAACACATCTAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGAAATAGGCATTCACTAAATATGTACTAAATCAAATGAACACATCT-AA  948

seq1  AGCAAAATTTGTGTGGAGCCACCAAAGAGATGATTAATTAAATGTAAATT  1000
      ||| ||||||||||||||||||| ||||||||||| ||||||||| ||||
seq2  AGC-AAATTTGTGTGGAGCCACC-AAGAGATGATT-ATTAAATGT-AATT  994

seq1  TGAAATACACTGGCCACTGCAAGGCCAATTAGGTCTAACTTTATTAAACT  1050
      || ||||||||||||||||||| ||||  |||||||||| |||||||  |
seq2  TG-AATACACTGGCCACTGCAA-GCCA--TAGGTCTAAC-TTATTAACTT  1039

seq1  GTCACATC-TCTGAGGAGAGGAAATTATTCAGCTGGAGGAGGGCCTGTCG  1099
      |||||||| ||||| |||||||||||||| ||||||||||||||   |||
seq2  GTCACATCTTCTGAAGAGAGGAAATTATT-AGCTGGAGGAGGGC--TTCG  1086

seq1  TTTGCCCTAATCCACATTTCTGCCTTTAGGCTAATCCTCAGATGAATTAC  1149
      ||||||||||||||||||| ||||  |||||||||||||| ||||| |||
seq2  TTTGCCCTAATCCACATTT-TGCC--TAGGCTAATCCTCAAATGAAATAC  1133

seq1  CTCTG  1154
      |||||
seq2  CTCTG  1138

seq1: chr7_98918411_98918987
seq2: B6Ng01-063O19.g_68_643 (reverse)

seq1  TTTTCTTTAGAGTTTTAATAATGTTGAATTATGTATTTTCCTCTCAATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTAGAGTTTTAATAATGTTGAATTATGTATTTTCCTCTCAATTT  50

seq1  AATTATTGATTCATTTTGCATTGCAATCACAGCGTCCCTCACACACCCTG  100
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AATTATTGATTCA-TTTGCATTGCAATCACAGCGTCCCTCACACACCCTG  99

seq1  ACCCTCATCCCTCCCTCCCCTTGATCTCTGAAAATAGTAAGATTCCTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCATCCCTCCCTCCCCTTGATCTCTGAAAATAGTAAGATTCCTCAC  149

seq1  TGGGTACCAATCCACTTTGACACCTCAAGTCACTGCAGGACTAGGTACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACCAATCCACTTTGACACCTCAAGTCACTGCAGGACTAGGTACAT  199

seq1  CCTCTCACCCTCAGTCCAACCAAGAGAGTTCCATTGTGGGAACAGGATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCACCCTCAGTCCAACCAAGAGAGTTCCATTGTGGGAACAGGATCC  249

seq1  ACAGGCAAGCAACAGAGTCTCCGCTCCAGTTTTTTGAGGACCCACATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAAGCAACAGAGTCTCCGCTCCAGTTTTTTGAGGACCCACATGAA  299

seq1  GACCAAGATTCATGTCTGCTCCATATGTGGGGTGGGGCTAGGTCCAGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGATTCATGTCTGCTCCATATGTGGGGTGGGGCTAGGTCCAGCCC  349

seq1  TTTTATACTCTTCAGTTGGTAGTTTGGTCTCTGTGACCCCCATTTAGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATACTCTTCAGTTGGTAGTTTGGTCTCTGTGACCCCCATTTAGTTG  399

seq1  AATCTGGTGGTCTTCTTGTGGAGTCCCAGTCCCCTTCAGGTTCCTCAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGTGGTCTTCTTGTGGAGTCCCAGTCCCCTTCAGGTTCCTCAATC  449

seq1  CTTCCTCCAACTTCTGTTAATAAAGAACAAAATAGTGTGGTTCTAACGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCCAACTTCTGTTAATAAAGAACAAAATAGTGTGGTTCTAACGTG  499

seq1  AAAGCACAGGCTATCAGATGGGAATCACACATCTCCTACCTCTGAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACAGGCTATCAGATGGGAATCACACATCTCCTACCTCTGAAAATA  549

seq1  GTGACAGTAAGTACAGTGTTTGAATTC  577
      |||||||||||||||||||||||||||
seq2  GTGACAGTAAGTACAGTGTTTGAATTC  576