BAC Information

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BAC

Clone NameB6Ng01-064A01
Chromosome7 (Build37)
Map Location 11,068,865 - 11,069,457
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139, LOC100042894, Vmn2r47, 2810047C21Rik, LOC665625, LOC545911, EG625580, LOC100042163, LOC625605, EG434117, EG628152, LOC100042921, Vmn2r52, LOC665663, V1re11, LOC628521, LOC628525, LOC100042206, Nlrp4d, LOC100042214, V1re10
Downstream geneZik1, EG628580, V1re9, V1rl1, EG628596, Nlrp4b, LOC333184, V1re13, BQ559217, LOC637237, LOC236479, EG665879, Zscan4b, LOC665793, EG665798, Gm397, Zscan4-ps1, LOC635187, LOC100042997, LOC100042293, Zscan4d, LOC628737, LOC676750, LOC672893, LOC546931, LOC675762, Zscan4e, LOC665857, LOC665861, Zscan4f, LOC673742, LOC665887, LOC637541, LOC100042361, Zscan4-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064A01.bB6Ng01-064A01.g
ACCDH883921DH883922
length594707
definitionDH883921|Mus musculus domesticus DNA, BAC clone: B6Ng01-064A01, 5' end.DH883922|Mus musculus domesticus DNA, BAC clone: B6Ng01-064A01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtaaatgcagtagattctttagataaaagtcccacttcaatag
actctgaagtgatcacataggtgcaaaatcatacaagtgagtgcacacaa
tctccatgagaaaaaaattgtcctcactcaatacaaaagtacagactgga
gaaaggacttactagtttttaaaatcttattatgttttatttctttactt
taaaatattagccgggcgtggtggcacacgcctttaatcccagcactcgg
gaggcagaggcaggcggatttctgagttcgaggccagcctggtctacagc
gtgagttccaggacagccagagctacacagagaaaccctgtctcaaaaaa
accaaaaaaaattaataaatgaatgaaacaataacaaaatgaataaatta
ataaaaacctagccactagggtaactgaacggtcacttaaacccgctaga
agagagaaactcaattttctccaatatagtgacattggttatatcaacca
ctccaggacaggtctcatgttcaggagtagtatcccacatataatggatt
ccacgggcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtga
gaattcctaaacctgataaacaaattcaacaaagtggctggaaaaaaaat
aactcaaacgaatcagtagccttcctctactgaaaggttaaaccgcctga
gaaagaaattagagaaatgacactttcaacaatagtcataaataatataa
aacaccatggtgtgactctaaccaagcaagtgaaagatttgtatgtcaag
aacttcaagtatctgaagaaaaaaattgaagaagatctcagaagatggaa
agatctccaatgcccatgaattggaaggagtaatatagtaaaaaattgcc
atcttgacaaaagtaatctacgaattccttggaatttccatcaaagttag
aactcaattctttatagagttagaaaggaaaaatctcaaattcatttgaa
ataacaaaaaacccaggataccaaaaactatactcaataataaaagaact
tcccagtgaatcaccattcctgacctcaagctgtactacagagcaatagt
gattaaaaattgaatggtattggtacagagacaggcaggcagatcaaagg
aatagaatttgaagacccataaatgaacccagacacctaaagtcacttga
tctttgccaaaggagctaaaaacatccagtggaaaaaaagacagcatttt
caacaaatggtgcttttctctactggatgttagcatgtagaaagaattca
aatttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_11068865_11069457
seq2: B6Ng01-064A01.b_28_620 (reverse)

seq1  CACACACACACACACACACACACACACACACACATGCCCGTGGAATCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACATGCCCGTGGAATCCAT  50

seq1  TATATGTGGGATACTACTCCTGAACATGAGACCTGTCCTGGAGTGGTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGGGATACTACTCCTGAACATGAGACCTGTCCTGGAGTGGTTGA  100

seq1  TATAACCAATGTCACTATATTGGAGAAAATTGAGTTTCTCTCTTCTAGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACCAATGTCACTATATTGGAGAAAATTGAGTTTCTCTCTTCTAGCG  150

seq1  GGTTTAAGTGACCGTTCAGTTACCCTAGTGGCTAGGTTTTTATTAATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAAGTGACCGTTCAGTTACCCTAGTGGCTAGGTTTTTATTAATTTA  200

seq1  TTCATTTTGTTATTGTTTCATTCATTTATTAATTTTTTTTGGTTTTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTGTTATTGTTTCATTCATTTATTAATTTTTTTTGGTTTTTTTG  250

seq1  AGACAGGGTTTCTCTGTGTAGCTCTGGCTGTCCTGGAACTCACGCTGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGGTTTCTCTGTGTAGCTCTGGCTGTCCTGGAACTCACGCTGTAG  300

seq1  ACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTG  350

seq1  CTGGGATTAAAGGCGTGTGCCACCACGCCCGGCTAATATTTTAAAGTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTAAAGGCGTGTGCCACCACGCCCGGCTAATATTTTAAAGTAAA  400

seq1  GAAATAAAACATAATAAGATTTTAAAAACTAGTAAGTCCTTTCTCCAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAAACATAATAAGATTTTAAAAACTAGTAAGTCCTTTCTCCAGTC  450

seq1  TGTACTTTTGTATTGAGTGAGGACAATTTTTTTCTCATGGAGATTGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTTTGTATTGAGTGAGGACAATTTTTTTCTCATGGAGATTGTGTG  500

seq1  CACTCACTTGTATGATTTTGCACCTATGTGATCACTTCAGAGTCTATTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCACTTGTATGATTTTGCACCTATGTGATCACTTCAGAGTCTATTGA  550

seq1  AGTGGGACTTTTATCTAAAGAATCTACTGCATTTACTGAATTC  593
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGACTTTTATCTAAAGAATCTACTGCATTTACTGAATTC  593