BAC Information

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BAC

Clone NameB6Ng01-064A16
Chromosome7 (Build37)
Map Location 33,331,165 - 33,332,216
singlet/doubletsinglet
Overlap geneEG384591
Upstream geneLOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365
Downstream geneLOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064A16.bB6Ng01-064A16.g
ACCDH883949DH883950
length1,1731,035
definitionDH883949|Mus musculus domesticus DNA, BAC clone: B6Ng01-064A16, 5' end.DH883950|Mus musculus domesticus DNA, BAC clone: B6Ng01-064A16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccgaggaataccgaaaggctgagaaacacctgaaaaaatt
ttcaacatccttaatcaccagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgagggtgtggagaaagaggaaaactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcgttcctccg
aaaattggacatagtactaccggatgatccgacaattcctctcctgggca
tatatacagaagatggccaacccgtaagaaggacacatgctccactttgt
tcatagcagccttatttataatagccagaagctcgaaagaacccagatgt
ccctcaacagaggaatggatacaaaaatgtggtacatttacacaatggag
tactactcagctattaaaaagaatgaattcatgaaattcctaggcaaatg
gttggacctggagagcatcatcatgagtgaggtaaccgaatcacaaaaga
actcaaatgaaatgtactcactgataagtggatattaacccagaaaatta
gtatagcgagatataaggtacaatatgtaaaacatatgaaactgaagaag
aacgaagaccaaagtgtggacactttgctccttcttagaattggaaacaa
tcacccatggaaggagttacagagacaaagtttggagctgagacaaaagg
atggtccatcttgagactgccatatccagggatccatcccataattagcc
tccaagcgatgacaccattgcatacactagcaggcctttgttgcaaggat
ggtgatatagctgtcccttgtgagactaggcggggctctagcaaacacag
aagtggatgctcacagtcaactattgaatggatcacagggccccaatgga
gagctagagatgtatccaaggagctaaagaagtctgcaacccatctgggg
aacaacattatggagctaccagtacccagactcttgactctagctgcata
ttatcaaaagatgactagtcggcatccttggaaagagaagcccattggtc
aggcaacggttaatgaccaatacaggggatggcaggccaaaaatgggaat
gaggtgggtgagggaggtgtgcg
gaattcttttcagaactaaggaatatgggcttttgttaatgcaattttaa
aaggagctgtttcttgtatatcttggctatcttctgaataaatgagacag
aggccatctatttatttaatcaagcattataacagaaaaagtgggcagcc
attgacctgctctatttctttaagctatactgcctatcttccaataacat
tccccaagatactcacctttttgggaggggaggcggtgcagcaaacttta
ttgatagtattcaagagagtagggagggctccctatgcccctcctgttat
ggggatctgaggtgaaaattgtgagggagaagctctgtgttggtagccaa
gttggtatagggactcctcagcaactgaggacctctatcttgctctcagt
gtccttgctggggtgggtagtccatgttttctaaaaccttgtaggccttg
taggccatgaggtcgactaccctgttgctgtagctgtattcattgtcata
caaggaaatgagcttgacatacttgtcattgagagcagtgtcagccctgg
catcgaaggtggacgagtgggagttgctgttgaagtcacaggaggcaacc
tggtcctcagtgtagcccaagaagcccttcagtgggccctcagatgtctg
cttcaccaccttcttgatgtcatcatacttttcaggtctcttcaggcaga
acaacagatacacaatggacacattgtgggtaggaacacagaaggccatg
ccagtgagcttcactttcagctctgggataaccttgcccaaagacttggc
agcaccagtggatgcagagatgatgttctgggtagccccatggccatcac
accacagcttttctagaggggcaatccacaatcttctgagttgcagtgat
gccatggactgtggtcatgagctctttcatgatgcccactgtcatggatg
acctgcatgagctaagcagtgtggtgagatgcatgctgaaaaattgagtg
attgtctatttctatggttactccctaccaaacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33331165_33332216
seq2: B6Ng01-064A16.g_70_1104 (reverse)

seq1  GTGTTTGTGATGGGAGTGAACCATAAGAAATATGACAACTCACTCAATAT  50
      ||||||| |  |||||| |||||| ||||||| ||||| ||||||||| |
seq2  GTGTTTG-GTAGGGAGT-AACCAT-AGAAATA-GACAA-TCACTCAAT-T  44

seq1  TTTCAGCAATGCATCCTTCACCACCAACTGCTTAGCCTCCATGGCCAAGG  100
      ||||||| |||||||  |||||||  ||||||||||   ||||    |||
seq2  TTTCAGC-ATGCATC--TCACCAC--ACTGCTTAGC--TCATG---CAGG  84

seq1  TCATCCATGACAGGTTGGGCATCATGAAAGAGCTCATGACCACAGTCCAT  150
      |||||||||||||  |||||||||||||||||||||||||||||||||||
seq2  TCATCCATGACAG--TGGGCATCATGAAAGAGCTCATGACCACAGTCCAT  132

seq1  GGCATCACTGCAACTCAGAAGATTGTGGATTGCCCCTCTAG-AAAGCTGT  199
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGCATCACTGCAACTCAGAAGATTGTGGATTGCCCCTCTAGAAAAGCTGT  182

seq1  GGTGTGATGGCCATGGGGCTACCCAGAACATCATCTCTGCATCCACTGGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGATGGCCATGGGGCTACCCAGAACATCATCTCTGCATCCACTGGT  232

seq1  GCTGCCAAGTCTTTGGGCAAGGTTATCCCAGAGCTGAAAGTGAAGCTCAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCAAGTCTTTGGGCAAGGTTATCCCAGAGCTGAAAGTGAAGCTCAC  282

seq1  TGGCATGGCCTTCTGTGTTCCTACCCACAATGTGTCCATTGTGTATCTGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGGCCTTCTGTGTTCCTACCCACAATGTGTCCATTGTGTATCTGT  332

seq1  TGTTCTGCCTGAAGAGACCTGAAAAGTATGATGACATCAAGAAGGTGGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGCCTGAAGAGACCTGAAAAGTATGATGACATCAAGAAGGTGGTG  382

seq1  AAGCAGACATCTGAGGGCCCACTGAAGGGCTTCTTGGGCTACACTGAGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGACATCTGAGGGCCCACTGAAGGGCTTCTTGGGCTACACTGAGGA  432

seq1  CCAGGTTGCCTCCTGTGACTTCAACAGCAACTCCCACTCGTCCACCTTCG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTGCCTCCTGTGACTTCAACAGCAACTCCCACTCGTCCACCTTCG  482

seq1  ATGCCAGGGCTGACACTGCTCTCAATGACAAGTATGTCAAGCTCATTTCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGGGCTGACACTGCTCTCAATGACAAGTATGTCAAGCTCATTTCC  532

seq1  TTGTATGACAATGAATACAGCTACAGCAACAGGGTAGTCGACCTCATGGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGACAATGAATACAGCTACAGCAACAGGGTAGTCGACCTCATGGC  582

seq1  CTACAAGGCCTACAAGGTTTTAGAAAACATGGACTACCCACCCCAGCAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAGGCCTACAAGGTTTTAGAAAACATGGACTACCCACCCCAGCAAG  632

seq1  GACACTGAGAGCAAGATAGAGGTCCTCAGTTGCTGAGGAGTCCCTATACC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGAGAGCAAGATAGAGGTCCTCAGTTGCTGAGGAGTCCCTATACC  682

seq1  AACTTGGCTACCAACACAGAGCTTCTCCCTCACAATTTTCACCTCAGATC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGCTACCAACACAGAGCTTCTCCCTCACAATTTTCACCTCAGATC  732

seq1  CCCATAACAGGAGGGGCATAGGGAGCCCTCCCTACTCTCTTGAATACTAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAACAGGAGGGGCATAGGGAGCCCTCCCTACTCTCTTGAATACTAT  782

seq1  CAATAAAGTTTGCTGCACCGCCTCCCCTCCCAAAAAGGTGAGTATCTTGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAGTTTGCTGCACCGCCTCCCCTCCCAAAAAGGTGAGTATCTTGG  832

seq1  GGAATGTTATTGGAAGATAGGCAGTATAGCTTAAAGAAATAGAGCAGGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTTATTGGAAGATAGGCAGTATAGCTTAAAGAAATAGAGCAGGTC  882

seq1  AATGGCTGCCCACTTTTTCTGTTATAATGCTTGATTAAATAAATAGATGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTGCCCACTTTTTCTGTTATAATGCTTGATTAAATAAATAGATGG  932

seq1  CCTCTGTCTCATTTATTCAGAAGATAGCCAAGATATACAAGAAACAGCTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTCTCATTTATTCAGAAGATAGCCAAGATATACAAGAAACAGCTC  982

seq1  CTTTTAAAATTGCATTAACAAAAGCCCATATTCCTTAGTTCTGAAAAGAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAAATTGCATTAACAAAAGCCCATATTCCTTAGTTCTGAAAAGAA  1032

seq1  TTC  1052
      |||
seq2  TTC  1035