BAC Information

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BAC

Clone NameB6Ng01-064C22
Chromosome7 (Build37)
Map Location 4,620,628 - 4,621,787
singlet/doubletsinglet
Overlap gene1500019G21Rik
Upstream geneTmc4, Leng4, Tsen34, Rps9, Lilrb3, Pira1, LOC100041137, LOC100041146, Pira2, LOC675749, LOC100038908, LOC100038909, Pira11, Pira3, LOC100041186, LOC664841, Lair1, Ttyh1, Leng8, Leng9, Cdc42ep5, LOC384521, EG232801, Ncr1, Gp6, LOC100041851, Atp6v0c-ps1, Rdh13, Eps8l1, Ppp1r12c, Tnnt1, Tnni3, 6030429G01Rik, Syt5, Ptprh, LOC669557, Tmem86b, Saps1, EG628211
Downstream geneBrsk1, BC022651, Suv420h2, Cox6b2, 4930401F20Rik, Il11, 4930572D21Rik, 2210411K11Rik, Rpl28, Ube2s, D430041B17Rik, Isoc2b, Isoc2a, LOC384524, Zfp628, Nat14, A430110N23Rik, LOC665049, Gm1079, Gm1078, Zfp579, Fiz1, Zfp524, 6430526N21Rik, 4632433K11Rik, Zfp784, Zfp580, Ccdc106, U2af2, Epn1, Rfpl4, Rasl2-9, EG665126, V1rd5, V1rd3, EG665150, Nlrp2, EG272350, V1rd4, EG665163, V1rd10, EG630071, EG665255, EG636697, EG636705, LOC636731
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064C22.bB6Ng01-064C22.g
ACCDH884047DH884048
length7981,123
definitionDH884047|Mus musculus domesticus DNA, BAC clone: B6Ng01-064C22, 5' end.DH884048|Mus musculus domesticus DNA, BAC clone: B6Ng01-064C22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccattctaaaaaatgaaccccatattttctctttctccagtacaa
gacatttaaagtgggcatcagtgtctaaaggccaagatgaatatgagttg
ctggtttatggacacattagctaatacttgcctatttctgtctttcttag
tttctaggtccaggcctgaggaccatggtggttggaccatagcccccatt
catactgaacacaagtttcaggaggaggtagagggagggagggaggtcta
tacacacaatgaagttttcaatctacatctaaagcttcagatttgttgag
tggtttgggctattaactccaggccgtggtcagactctattgctaagggg
aggccatatttggggactagttcctgaaggagcattttagctactatttg
agcagtttcactcagattgggaaggcttctatccaccctggaaagctatc
ctcccccagcaggctggatcttaccgaagtcagttctcccagagtctgcc
agggtgtgggtctctcatttggaccccttcctgcgtaagggctgtctgat
ttggattcatttgagcacaaacctggcatctggctgagacacccatgcta
ggctatccagtctcggtataatatacctgagtctgagccccaggtgtagc
ctggtgaagattagtttccagcagtcctgctggttgtttctgaatgaacc
ttttcctggtgtcttcctgttaacctgtggatttgagctgtccatttctt
ctttacatggagtataagggagtaccgggttgggggcaggccattaaa
gaattcaagatcatcttcaatgacagtgagtctgtggccagccatcgcta
tctgagaccctatttcaaaaaatacctcaaaataaaactagataagataa
ataaataacaaaatagtccataggtaggagacatgaggcagcacaaattc
aactggcaaacagcccgaaggctctacctcgaaagcataaccaggagaag
gacggtccttgaccccagggcttgtccacctgaacatggtatgcatttag
ggacaggccagcccatgctgtgggagggatcacgagcacagctacatgag
aacgagagccctgaccccaacaactctaaaactgaaaatgctctggtcat
taccagtgtccctggagggtaccagtcaccattcctcaaggaccattgct
tacttacgtcacccttcattctcatctaggtcattaccacgaccctcacc
ccgctttccatgaaccctgcctgagcccccatgtctctcactcaccccgc
tttccatgaaccctgcctgagcccccatgtctctcactcaccccgctttc
catgaaccctgcctgagcccccatgtctctcactcaccccgctttccatg
aaccctgcctgagcccccatgtctctcactcaccccgctttccatgaacc
ctgcctgagcccccatgtctctcactcaccccgctttccatgaaccctgc
ctgagcccccatgtctctcactcactccgctttccatgaaccctgcctga
gcccccatgtctctcactcaccccgctttccatgaaccctgcctgagccc
ccatgtctctcactcaccccgctttccatgaacctgcctgagccccatgt
cttctctgaaaccagggaatgcagaatgaatgctactgctctcaactgac
agccacgtgtcatcacgcactcacacttctccgtaaaagctacacttact
ctgtgctgaaagcatgagcagcgagcatggtgcacaagcttcatccagcc
ttaggagcaaggcagcgaattctgagtcaggcagctgtctacgagcgagt
tcagaaggcaggctatccagatatctgtccttaatacataaccgaaacaa
tgagctgtcaggcgagaaggtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_4620628_4621787
seq2: B6Ng01-064C22.g_68_1190

seq1  GAATTCAAGATCATCTTCAATGACAGTGAGTCTGTGGCCAGCCATCGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGATCATCTTCAATGACAGTGAGTCTGTGGCCAGCCATCGCTA  50

seq1  TCTGAGACCCTATTTCAAAAAATACCTCAAAATAAAACTAGATAAGATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGACCCTATTTCAAAAAATACCTCAAAATAAAACTAGATAAGATAA  100

seq1  ATAAATAACAAAATAGTCCATAGGTAGGAGACATGAGGCAGCACAAATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAACAAAATAGTCCATAGGTAGGAGACATGAGGCAGCACAAATTC  150

seq1  AACTGGCAAACAGCCCGAAGGCTCTACCTCGAAAGCATAACCAGGAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGCAAACAGCCCGAAGGCTCTACCTCGAAAGCATAACCAGGAGAAG  200

seq1  GACGGTCCTTGACCCCAGGGCTTGTCCACCTGAACATGGTATGCATTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGTCCTTGACCCCAGGGCTTGTCCACCTGAACATGGTATGCATTTAG  250

seq1  GGACAGGCCAGCCCATGCTGTGGGAGGGATCACGAGCACAGCTACATGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGGCCAGCCCATGCTGTGGGAGGGATCACGAGCACAGCTACATGAG  300

seq1  AACGAGAGCCCTGACCCCAACAACTCTAAAACTGAAAATGCTCTGGTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAGAGCCCTGACCCCAACAACTCTAAAACTGAAAATGCTCTGGTCAT  350

seq1  TACCAGTGTCCCTGGAGGGTACCAGTCACCATTCCTCAAGGACCATTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGTGTCCCTGGAGGGTACCAGTCACCATTCCTCAAGGACCATTGCT  400

seq1  TACTTACGTCACCCTTCATTCTCATCTAGGTCATTACCACGACCCTCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACGTCACCCTTCATTCTCATCTAGGTCATTACCACGACCCTCACC  450

seq1  CCGCTTTCCATGAACCCTGCCTGAGCCCCCATGTCTCTCACTCACCCCGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTTTCCATGAACCCTGCCTGAGCCCCCATGTCTCTCACTCACCCCGC  500

seq1  TTTCCATGAACCCTGCCTGAGCCCCCATGTCTCTCACTCACCCCGCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATGAACCCTGCCTGAGCCCCCATGTCTCTCACTCACCCCGCTTTC  550

seq1  CATGAACCCTGCCTGAGCCCCCATGTCTCTCACTCACCCCGCTTTCCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAACCCTGCCTGAGCCCCCATGTCTCTCACTCACCCCGCTTTCCATG  600

seq1  AACCCTGCCTGAGCCCCCATGTCTCTCACTCACCCCGCTTTCCATGAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGCCTGAGCCCCCATGTCTCTCACTCACCCCGCTTTCCATGAACC  650

seq1  CTGCCTGAGCCCCCATGTCTCTCACTCACCCCGCTTTCCATGAACCCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGAGCCCCCATGTCTCTCACTCACCCCGCTTTCCATGAACCCTGC  700

seq1  CTGAGCCCCCATGTCTCTCACTCACTCCGCTTTCCATGAACCCTGCCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCCCCATGTCTCTCACTCACTCCGCTTTCCATGAACCCTGCCTGA  750

seq1  GCCCCCATGTCTCTCACTCACCCCGCTTTCCATGAACCCTGCCTGAGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCATGTCTCTCACTCACCCCGCTTTCCATGAACCCTGCCTGAGCCC  800

seq1  CCATGTCTCTCACTCACCCCGCTTTCCATGAACCCTGCCTGAGCCCCCAT  850
      |||||||||||||||||||||||||||||||| |||||||||| ||||||
seq2  CCATGTCTCTCACTCACCCCGCTTTCCATGAA-CCTGCCTGAG-CCCCAT  848

seq1  GTCTTCTCTGAAACAGGGGAATGCAGAATGAATGCTACTGCTCTCAACTG  900
      ||||||||||||||  ||||||||||||||||||||||||||||||||||
seq2  GTCTTCTCTGAAACCAGGGAATGCAGAATGAATGCTACTGCTCTCAACTG  898

seq1  ACAGCCACGTGTCATCAACGCACTCACACTTCTCCCGTTAAAAAGCTACA  950
      |||||||||||||||| |||||||||||||||| ||||  ||||||||||
seq2  ACAGCCACGTGTCATC-ACGCACTCACACTTCT-CCGT--AAAAGCTACA  944

seq1  CTTACTCTGTGCTGAAAAGCAATGAGCAGCCGAGCATGGTGGCACAAGCC  1000
      |||||||||||||| ||||| |||||||| |||||||||| ||||||| |
seq2  CTTACTCTGTGCTG-AAAGC-ATGAGCAG-CGAGCATGGT-GCACAAG-C  989

seq1  TTCAATCCCAGCACTTAGGAGGCAGAGGCAGGCGAATTTCTGAGTTCCAG  1050
      ||||   ||||| ||||||| ||| ||||| ||||| ||||||||  |||
seq2  TTCA--TCCAGC-CTTAGGA-GCA-AGGCA-GCGAA-TTCTGAGT--CAG  1030

seq1  GCCAGCCTGGTCTACAGAGCGAGTTCCAGGACAGCCAGGGCTACACAGAG  1100
      | ||||   |||||| ||||||||| |||   || || |||||  |||| 
seq2  G-CAGC--TGTCTAC-GAGCGAGTT-CAG--AAGGCA-GGCTATCCAGAT  1072

seq1  AAACCCTGTCTCAAAAAACAAAAACGAAAAGCAATGAGCTGTCAAGGCAG  1150
      |    ||||| |  || ||| || |||||  |||||||||||| |||| |
seq2  A---TCTGTC-CTTAATACATAACCGAAA--CAATGAGCTGTC-AGGC-G  1114

seq1  AGGAAGGTTA  1160
      | ||||||||
seq2  A-GAAGGTTA  1123