BAC Information

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BAC

Clone NameB6Ng01-065N18
Chromosome7 (Build37)
Map Location 106,747,864 - 106,892,608
singlet/doubletdoublet
Overlap geneArrb1, EG245190, Slco2b1, Olfr520
Upstream gene2210018M11Rik, LOC100040769, Prkrir, Wnt11, LOC666978, Uvrag, EG666529, Dgat2, Mogat2, Mtap6, Serpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630
Downstream geneOlfr521, Neu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065N18.bB6Ng01-065N18.g
ACCDH885212DH885213
length3521,128
definitionDH885212|Mus musculus domesticus DNA, BAC clone: B6Ng01-065N18, 5' end.DH885213|Mus musculus domesticus DNA, BAC clone: B6Ng01-065N18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,747,864 - 106,748,215)(106,891,485 - 106,892,608)
sequence
agagaggttacagtgtgaaaaaaaaaacaaaaacaaaaacagggcagtgt
gataacacatgcccataatctcagcagagggaagtgtgtgaggtaggagg
atcacgtttgaggccagccagggctgcaaaatgatcttagggtaaatgga
actcagggaagcaaaaagtgaatgtgtctcacgttggagacctgcttcct
gcagggtgttcattgggcatggatgcctccctcccacatctgctggtttt
tgacctgggaggcttctcactcaccttccttccttgccctccccatctta
tctagagagtctgaggagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tg
gaattcctgttgtaacttccatgcatgtggccttcaagtcacttcgcatt
ctgagcctcgttttcctcatctgcagccttgaaggattttattttacttt
tgtggagagactgcttagacagtcaatggttactgagactaaaccatgca
aaagctcaggatttgctgcagttttgtttccgtgactcctgctgttatct
gtctttctgtgggagggtctgggctcggatggtctgagtcttacctgtag
ggatatctgcttgcctgccgctggcctcgtatcatgcccaggattccata
gctcctgttcacccattggtcctggatgctgagagcttctgtcttttata
ctcagactttctggcccaagtctatagtccttggaccctggtccctggca
ctctactttagcactctctgcatatctttggcttggccatccctaacaat
gcttacctgttggatccgtcccacagtgatgtctgctgtggttctccaca
ccaggccttgacagaagtagcaggctgagatgagcttgagccattaaaac
ctcaaccctctccttgcagccaggtctcctgggtactgctcagcacaaca
cctcttccttttgtacaatcctccatactctcaggaaagcacttgctgcc
atctcctacagcctttcatcccagggaggcaaggtgtgtccctgggcttt
gctgataatgagaagattgtcactaacaaccctcaagggcccagaattta
tactaataatataaggtatagtctttgttctcattatctgcttctcacga
caacagaggaggcaggaagttacaatgggacaggacaggaagttcaaaag
gacagagagacttagggaatgaatagcttgttcactttaacaggatggat
ggaagcagagttgctcctctgaccctagggcttttgacacttgtaagcag
gcgactttgatcactgtctcaagagcagccgactgggcttgtttatatat
gagattccctcctgcctcggtttgcttgctctcccctatactcctcattg
tggcaataggaataaggaatctgctttcccgaacaacctctggttctaaa
agcagtcctcatccccctgtattcttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_106747864_106748215
seq2: B6Ng01-065N18.b_55_406

seq1  AGAGAGGTTACAGTGTGAAAAAAAAAACAAAAACAAAAACAGGGCAGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGTTACAGTGTGAAAAAAAAAACAAAAACAAAAACAGGGCAGTGT  50

seq1  GATAACACATGCCCATAATCTCAGCAGAGGGAAGTGTGTGAGGTAGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACACATGCCCATAATCTCAGCAGAGGGAAGTGTGTGAGGTAGGAGG  100

seq1  ATCACGTTTGAGGCCAGCCAGGGCTGCAAAATGATCTTAGGGTAAATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACGTTTGAGGCCAGCCAGGGCTGCAAAATGATCTTAGGGTAAATGGA  150

seq1  ACTCAGGGAAGCAAAAAGTGAATGTGTCTCACGTTGGAGACCTGCTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGGAAGCAAAAAGTGAATGTGTCTCACGTTGGAGACCTGCTTCCT  200

seq1  GCAGGGTGTTCATTGGGCATGGATGCCTCCCTCCCACATCTGCTGGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGTGTTCATTGGGCATGGATGCCTCCCTCCCACATCTGCTGGTTTT  250

seq1  TGACCTGGGAGGCTTCTCACTCACCTTCCTTCCTTGCCCTCCCCATCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGGGAGGCTTCTCACTCACCTTCCTTCCTTGCCCTCCCCATCTTA  300

seq1  TCTAGAGAGTCTGAGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGAGTCTGAGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  350

seq1  TG  352
      ||
seq2  TG  352

seq1: chr7_106891485_106892608
seq2: B6Ng01-065N18.g_70_1197 (reverse)

seq1  AGAAGAAATACA-GAGGATGAGGAACTGCTTCTGGAACCAGAGGCTTGTC  49
      ||||| |||||| | |||||||| ||||||| | |||||||||| |  ||
seq2  AGAAG-AATACAGGGGGATGAGG-ACTGCTTTTAGAACCAGAGGTTGTTC  48

seq1  GGGAAGGCAGATTCC-TATTCCTATGGCCACAATGA-GAG-CTAAGGGAG  96
      ||||| ||||||||| ||||||||| |||||||||| |||  || |||||
seq2  GGGAAAGCAGATTCCTTATTCCTATTGCCACAATGAGGAGTATAGGGGAG  98

seq1  AGCCAGCAAAACCGAGGCAGGAGGGAATC-CATAT-TAAACAGCCCCAAG  144
      ||| ||| ||||||||||||||||||||| ||||| ||||||  ||| ||
seq2  AGCAAGC-AAACCGAGGCAGGAGGGAATCTCATATATAAACAAGCCC-AG  146

seq1  TCGCTTGCTCTTGAG-CAGTGATCAAAGTCGCCTGC-TAC-AGTGATCAA  191
      |||  |||||||||| |||||||||||||||||||| ||| ||||   ||
seq2  TCGGCTGCTCTTGAGACAGTGATCAAAGTCGCCTGCTTACAAGTGTCAAA  196

seq1  AGCCCTAGGGTCAGAGAGCCAACTCTGCTTCCATCCATCCCTGTTAAAGT  241
      ||||||||||||||||   ||||||||||||||||||| |||||||||||
seq2  AGCCCTAGGGTCAGAGGAGCAACTCTGCTTCCATCCAT-CCTGTTAAAGT  245

seq1  GAACAAGCTATTTCATTCCCTAAGTCTCTCTGTCCTTTTGAACTTCCTGT  291
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAACAAGCTA-TTCATTCCCTAAGTCTCTCTGTCCTTTTGAACTTCCTGT  294

seq1  CCTGTCCCATTGTAACTTCCTGCCTCCTCTGTTGTCGTGAGAAGCAGATA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCCATTGTAACTTCCTGCCTCCTCTGTTGTCGTGAGAAGCAGATA  344

seq1  ATGAGAACAAAGACTATACC-TATATTATTAGTATAAAATTCTGGGCCCT  390
      |||||||||||||||||||| |||||||||||||| ||||||||||||||
seq2  ATGAGAACAAAGACTATACCTTATATTATTAGTAT-AAATTCTGGGCCCT  393

seq1  TGAGGGTTGTTAGTGACAATCTTCTCATTATCAGCAAAGCCCAGGGACAC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTTGTTAGTGACAATCTTCTCATTATCAGCAAAGCCCAGGGACAC  443

seq1  ACCTTGCCTCCCTGGGATG-AAGGCTGTAGGAGATGGCAGCAAGTGCTTT  489
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACCTTGCCTCCCTGGGATGAAAGGCTGTAGGAGATGGCAGCAAGTGCTTT  493

seq1  CCTGAGAGTATGGAGGATTGTACAAAAGGAAGAGGTGTTGTGCTGAGCAG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGAGTATGGAGGATTGTACAAAAGGAAGAGGTGTTGTGCTGAGCAG  543

seq1  TACCCAGGAGACCTGGCTGCAAGGAGAGGGTTGAGGTTTTAATGGCTCAA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGGAGACCTGGCTGCAAGGAGAGGGTTGAGGTTTTAATGGCTCAA  593

seq1  GCTCATCTCAGCCTGCTACTTCTGTCAAGGCCTGGTGTGGAGAACCACAG  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATCTCAGCCTGCTACTTCTGTCAAGGCCTGGTGTGGAGAACCACAG  643

seq1  CAGACATCACTGTGGGACGGATCCAACAGGTAAGCATTGTTAGGGATGGC  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATCACTGTGGGACGGATCCAACAGGTAAGCATTGTTAGGGATGGC  693

seq1  CAAGCCAAAGATATGCAGAGAGTGCTAAAGTAGAGTGCCAGGGACCAGGG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCAAAGATATGCAGAGAGTGCTAAAGTAGAGTGCCAGGGACCAGGG  743

seq1  TCCAAGGACTATAGACTTGGGCCAGAAAGTCTGAGTATAAAAGACAGAAG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGACTATAGACTTGGGCCAGAAAGTCTGAGTATAAAAGACAGAAG  793

seq1  CTCTCAGCATCCAGGACCAATGGGTGAACAGGAGCTATGGAATCCTGGGC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGCATCCAGGACCAATGGGTGAACAGGAGCTATGGAATCCTGGGC  843

seq1  ATGATACGAGGCCAGCGGCAGGCAAGCAGATATCCCTACAGGTAAGACTC  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACGAGGCCAGCGGCAGGCAAGCAGATATCCCTACAGGTAAGACTC  893

seq1  AGACCATCCGAGCCCAGACCCTCCCACAGAAAGACAGATAACAGCAGGAG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATCCGAGCCCAGACCCTCCCACAGAAAGACAGATAACAGCAGGAG  943

seq1  TCACGGAAACAAAACTGCAGCAAATCCTGAGCTTTTGCATGGTTTAGTCT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGGAAACAAAACTGCAGCAAATCCTGAGCTTTTGCATGGTTTAGTCT  993

seq1  CAGTAACCATTGACTGTCTAAGCAGTCTCTCCACAAAAGTAAAATAAAAT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAACCATTGACTGTCTAAGCAGTCTCTCCACAAAAGTAAAATAAAAT  1043

seq1  CCTTCAAGGCTGCAGATGAGGAAAACGAGGCTCAGAATGCGAAGTGACTT  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAAGGCTGCAGATGAGGAAAACGAGGCTCAGAATGCGAAGTGACTT  1093

seq1  GAAGGCCACATGCATGGAAGTTACAACAGGAATTC  1124
      |||||||||||||||||||||||||||||||||||
seq2  GAAGGCCACATGCATGGAAGTTACAACAGGAATTC  1128