BAC Information

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BAC

Clone NameB6Ng01-066F19
Chromosome7 (Build37)
Map Location 119,172,512 - 119,303,895
singlet/doubletdoublet
Overlap geneUsp47, Dkk3
Upstream geneCtr9, Eif4g2, LOC100043221, LOC100042658, LOC384658, Galntl4, LOC668399, LOC100042678
Downstream geneMical2, Micalcl, Parva, LOC627808, Tead1, 4632411J06Rik, LOC434227
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066F19.bB6Ng01-066F19.g
ACCDH885561DH885562
length1,093743
definitionDH885561|Mus musculus domesticus DNA, BAC clone: B6Ng01-066F19, 5' end.DH885562|Mus musculus domesticus DNA, BAC clone: B6Ng01-066F19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,172,512 - 119,173,623)(119,303,351 - 119,303,895)
sequence
gaattcacagttctcaggtttttttctaaattatcagtttagcagatggt
ccttaatgggcgacagggggtgagtatggcagtttggggactcaggaaag
agcaggggttgtgctgctgacatccagtggatagaaaccaggtatgctgc
caacgtctttataggaccagggcagcccctttaacaaagaactcctgtac
atcaggtatggtggcacattcttttaattccggcactctgggaggcagag
tcaggtggatttctgtgagttggtttatgtggagggttctgggacaggct
caggagcctgtctctgattaagtaaaagaaaaagaaaaagaaaagaaaag
aaagggaaggaaggaaaaaaaaaaaaaccaaccaaattcctgtaacttag
tcagtagaaccagtgttgaaaagccatagttgttataaagactattgagt
gtacacattttgctcttacagtcacacctaccatttttgtcattgtaaga
aattaccagctctactagcttttctgtgaactggaggccagcctgattta
tgtagatagcaagttccaggctgactttggcttcgatgagaccctgtctt
aaacaaactttagtagaagagagttgaaagaaaaacttgggaaagaaaaa
attgatgagaaacaactccccttcccacctaccacacacagacacacgct
tagagcaagttggtagagccaaggtttacatagttagaattcaggagaga
gcagaagaaatgaaggaaggacgtgaaagaagttaagtcacttaaggaag
tttccaggcccagtgagtcctgagtgagcaggacggactggccagaacct
agcagtacagctaaaatagacgatgtaatggagaccacttggaattctaa
gactcctccaggtatgggtggcagagcaggtaggacacttcaaatagaga
agctggtgtgttcgcaacatcacaagagaattccttcaaatttttctggt
gataattctctgccagctaaacgtctctaaaatacggaaaatcttattgg
ttttggtttagtttgtggatattgcattatttctagtacacct
gaattcaatgagtaaaacttaataaataaattaaataaataactaattaa
ctaactaactaactaaataaataaataaataaataaatggataatgcttg
tcactatccacgtcaccgtagtgctgtaccagcagctattgctctaacca
ccccaccccacttcgtttctcagggatcaggtgtgtaggcctggagccct
gcagatacaaccaagctcctggttcctcgtgggtggcaggggaggggctg
gtgaagagactccagtgagtctgtgacctgtgctagctaccccagaggac
agatgaggcatgttccagtttggctttctgttgctgtgataaagatcatg
attaaaagccactcagggaggaaagggttcattgcgtcttacaggtttat
actccagcatcaaggaagccaggcctggagctcaggacgtgaggtagagc
caatggaggaaggtcactgtcttttgctcttctggcttgctcagccactt
ttcttacacagccttggctcaactgcctgttggtggtatcacccctagtg
gctgggatcgcctacatcaattagcagttaagaaaatgctgcaacggaca
gaccaaaccaatggaggcagtttctcagctgaggtgttttttccccacgt
ggctctagttttgtgtcaagttgacaaaaaattagccagcacagggaaga
aatgagaaaaagatcaggagatgcggagaggggggaggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_119172512_119173623
seq2: B6Ng01-066F19.b_45_1137

seq1  GAATTCACAGTTCTCAGGTTTTTTTCTAAATTATCAGTTTAGCAGATGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGTTCTCAGGTTTTTTTCTAAATTATCAGTTTAGCAGATGGT  50

seq1  CCTTAATGGGCGACAGGGGGTGAGTATGGCAGTTTGGGGACTCAGGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATGGGCGACAGGGGGTGAGTATGGCAGTTTGGGGACTCAGGAAAG  100

seq1  AGCAGGGGTTGTGCTGCTGACATCCAGTGGATAGAAACCAGGTATGCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGGGTTGTGCTGCTGACATCCAGTGGATAGAAACCAGGTATGCTGC  150

seq1  CAACGTCTTTATAGGACCAGGGCAGCCCCTTTAACAAAGAACTCCTGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGTCTTTATAGGACCAGGGCAGCCCCTTTAACAAAGAACTCCTGTAC  200

seq1  ATCAGGTATGGTGGCACATTCTTTTAATTCCGGCACTCTGGGAGGCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGTATGGTGGCACATTCTTTTAATTCCGGCACTCTGGGAGGCAGAG  250

seq1  TCAGGTGGATTTCTGTGAGTTGGTTTATGTGGAGGGTTCTGGGACAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTGGATTTCTGTGAGTTGGTTTATGTGGAGGGTTCTGGGACAGGCT  300

seq1  CAGGAGCCTGTCTCTGATTAAGTAAAAGAAAAAGAAAAAGAAAAGAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCCTGTCTCTGATTAAGTAAAAGAAAAAGAAAAAGAAAAGAAAAG  350

seq1  AAAGGGAAGGAAGGAAAAAAAAAAAAACCAACCAAATTCCTGTAACTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAAGGAAGGAAAAAAAAAAAAACCAACCAAATTCCTGTAACTTAG  400

seq1  TCAGTAGAACCAGTGTTGAAAAGCCATAGTTGTTATAAAGACTATTGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAGAACCAGTGTTGAAAAGCCATAGTTGTTATAAAGACTATTGAGT  450

seq1  GTACACATTTTGCTCTTACAGTCACACCTACCATTTTTGTCATTGTAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACATTTTGCTCTTACAGTCACACCTACCATTTTTGTCATTGTAAGA  500

seq1  AATTACCAGCTCTACTAGCTTTTCTGTGAACTGGAGGCCAGCCTGATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACCAGCTCTACTAGCTTTTCTGTGAACTGGAGGCCAGCCTGATTTA  550

seq1  TGTAGATAGCAAGTTCCAGGCTGACTTTGGCTTCGATGAGACCCTGTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATAGCAAGTTCCAGGCTGACTTTGGCTTCGATGAGACCCTGTCTT  600

seq1  AAACAAACTTTAGTAGAAGAGAGTTGAAAGAAAAACTTGGGAAAGAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACTTTAGTAGAAGAGAGTTGAAAGAAAAACTTGGGAAAGAAAAA  650

seq1  ATTGATGAGAAACAACTCCCCTTCCCACCTACCACACACAGACACACGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATGAGAAACAACTCCCCTTCCCACCTACCACACACAGACACACGCT  700

seq1  TAGAGCAAGTTGGTAGAGCCAAGGTCTACATAGTTAGAATTCAGGAGAGA  750
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAGAGCAAGTTGGTAGAGCCAAGGTTTACATAGTTAGAATTCAGGAGAGA  750

seq1  GCAGAAGAAATGAAGGAAGGACGTGAAAGAAGTTAAGTCACTTAAGGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCAGAAGAAATGAAGGAAGGACGTGAAAGAAGTTAAGTCACTTAAGG-AA  799

seq1  GTTTCCAGGCCCAGTGAGTCCTGAGTGAGCAGGACGGACTGGCCAGAACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCAGGCCCAGTGAGTCCTGAGTGAGCAGGACGGACTGGCCAGAACC  849

seq1  TAGCAGTACAGCTAAAATAGACGATGTAATGGAGACCACTTGGAATTCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTACAGCTAAAATAGACGATGTAATGGAGACCACTTGGAATTCTA  899

seq1  AGACTCCTCCAGGTATGGGTGGCAAGAGCAAGGTAGGACACTTCAAAATA  950
      ||||||||||||||||||||||| ||||| |||||||||||||| |||||
seq2  AGACTCCTCCAGGTATGGGTGGC-AGAGC-AGGTAGGACACTTC-AAATA  946

seq1  GAAGAAGCTGGTGTGTTCAGCAACATCACAAGAGGAATTCCTTCAAAATT  1000
      | |||||||||||||||| |||||||||||||| |||||||||| |||||
seq2  G-AGAAGCTGGTGTGTTC-GCAACATCACAAGA-GAATTCCTTC-AAATT  992

seq1  TTTCTGGGTGATAATTCTCTGCCCAGCTAAACAGTCTCTAAAATAAAAGG  1050
      ||||| ||||||||||||||| |||||||||| |||||||||||   | |
seq2  TTTCT-GGTGATAATTCTCTG-CCAGCTAAAC-GTCTCTAAAAT---ACG  1036

seq1  GAAAATCTTTTTTGGTTTTGGTTTTAGTTTGCTGTAATATGCATTATTTC  1100
      ||||||| || |||||||||| ||||||||| || |   |||||||||||
seq2  GAAAATC-TTATTGGTTTTGG-TTTAGTTTG-TGGATATTGCATTATTTC  1083

seq1  TAAGTTACACCT  1112
      ||   |||||||
seq2  TA--GTACACCT  1093

seq1: chr7_119303351_119303895
seq2: B6Ng01-066F19.g_265_810 (reverse)

seq1  CCTCCCCTCCCCCCTCTCCGCATCTCCTGATCTTTTTCTCATTTCTTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCTCCCCCCTCTCCGCATCTCCTGATCTTTTTCTCATTTCTTCCC  50

seq1  TGTGCTGGCTAATTTTTTGTCAACTTGACAC-AAACTAGAGCCACGTGGG  99
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGTGCTGGCTAATTTTTTGTCAACTTGACACAAAACTAGAGCCACGTGGG  100

seq1  GAAAAAACACCTCAGCTGAGAAACTGCCTCCATTGGTTTGGTCTGTCCGT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAACACCTCAGCTGAGAAACTGCCTCCATTGGTTTGGTCTGTCCGT  150

seq1  TGCAGCATTTTCTTAACTGCTAATTGATGTAGGCGATCCCAGCCACTAGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCATTTTCTTAACTGCTAATTGATGTAGGCGATCCCAGCCACTAGG  200

seq1  GGTGATACCACCAACAGGCAGTTGAGCCAAGGCTGTGTAAGAAAAGTGGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATACCACCAACAGGCAGTTGAGCCAAGGCTGTGTAAGAAAAGTGGC  250

seq1  TGAGCAAGCCAGAAGAGCAAAAGACAGTGACCTTCCTCCATTGGCTCTAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAAGCCAGAAGAGCAAAAGACAGTGACCTTCCTCCATTGGCTCTAC  300

seq1  CTCACGTCCTGAGCTCCAGGCCTGGCTTCCTTGATGCTGGAGTATAAACC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACGTCCTGAGCTCCAGGCCTGGCTTCCTTGATGCTGGAGTATAAACC  350

seq1  TGTAAGACGCAATGAACCCTTTCCTCCCTGAGTGGCTTTTAATCATGATC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGACGCAATGAACCCTTTCCTCCCTGAGTGGCTTTTAATCATGATC  400

seq1  TTTATCACAGCAACAGAAAGCCAAACTGGAACATGCCTCATCTGTCCTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCACAGCAACAGAAAGCCAAACTGGAACATGCCTCATCTGTCCTCT  450

seq1  GGGGTAGCTAGCACAGGTCACAGACTCACTGGAGTCTCTTCACCAGCCCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTAGCTAGCACAGGTCACAGACTCACTGGAGTCTCTTCACCAGCCCC  500

seq1  TCCCCTGCCACCCACGAGGAACCAGGAGCTTGGTTGTATCTGCAGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGCCACCCACGAGGAACCAGGAGCTTGGTTGTATCTGCAGG  546