BAC Information

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BAC

Clone NameB6Ng01-066N20
Chromosome7 (Build37)
Map Location 115,723,628 - 115,856,940
singlet/doubletdoublet
Overlap geneOlfr506, Olfr507, Olfr508, Olfr509, Olfr510, Olfr511-ps1, Olfr512
Upstream geneOlfml1, Ppfibp2, 5330417H12Rik, Cyb5r2, Ovch2, LOC100042310, Olfr467, Olfr468-ps1, Olfr469, GA_x5J8B7W6B6J-2580381-2580079, Olfr470, Olfr471, LOC626661, Olfr472, Olfr473, LOC669301, Olfr474, Olfr476, Olfr477, LOC626732, Olfr478, Olfr479, Olfr480, Olfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490, LOC626881, Olfr491, Olfr492, Olfr493, Olfr494, Olfr495, Olfr496-ps1, Olfr497, Olfr498, Olfr499-ps1, Olfr500-ps1, Olfr501-ps1, Olfr502, LOC269980, Olfr503, Olfr504, Olfr505-ps1
Downstream geneOlfr513, Olfr514, Olfr515-ps1, Olfr516, Olfr517, Olfr518, Olfr519, Nlrp10, Eif3s5, BC049265, Tub, Ric3, Lmo1, Stk33, EG668320, 1700095J03Rik, Trim66, Rpl27a, St5, LOC100042582, D930014E17Rik, BC051019
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066N20.bB6Ng01-066N20.g
ACCDH885921DH885922
length1,182920
definitionDH885921|Mus musculus domesticus DNA, BAC clone: B6Ng01-066N20, 5' end.DH885922|Mus musculus domesticus DNA, BAC clone: B6Ng01-066N20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,723,628 - 115,724,828)(115,856,021 - 115,856,940)
sequence
gaattctaggtttatgagttttctttggtgacttggaggggttctgcaat
gatggcttagaggccatgctttgggtcccggactgccccagggaatttct
tgtaggaagggagggaataaactcatcttcctcctcactatcggagtctg
acacttctgctgaggatacggactcttcctcttcttggtcgattttatca
ccatctagaagccaaagctgttgcctaatctgcttcaaagtcaagagaga
attccttctatggacacaagaagtatgggtgggttctttgtgagtttctt
gttcttttgcctttctcccaatgtatcctgtctgtcagacccacagaagg
caccactgaagatctcaacccattcctgatagggctaagtgcattctcca
taccaagatttgtgatcatcatagctgagtcctaggctctcagaatcaca
ctgcctttggtacaaaaaggttgagcctgtccattttttcctagagtttc
caaagctgaagagggctttatttcacaaggtttagactttttaagaggta
aggtggtctcatagaaggctgctattcttttaggtgtttattgataatcc
caggagtcactagagctcttctgtgaccgcctcatgttaggcttcctgat
aaaacctaagccattgagttccagtgacttctttacactgggggtgacaa
tattagcagaagtctggtgagatttggaactagaatgacttgatttgatc
cctttgacctcttgttttgttgtgttccaggcagggctttttacattctt
aatcttggcttttaaaggtctttggcacttgggaatatcttctagtttcc
ttaatgctgcaatcacttctaatggcaatgatacaaagtcctttttattt
cagggtagcttcacaaacaatgtctcctcacttttctgattcatagggat
cagttcttctgggtctaatgccacctgaacaggtcatgatggtctccata
gaaacgtatcactgtcagaacagtcaacagaaatactcctgtgcaggagg
acctctggctacagtgcttttgagattagaatctcaagaatcgaacaaac
cattattcgtgcacatttcctggaagaaattctgattcattggaaataat
caattagttggcacataggctttttatatctt
gaattcaactgtagagctgtgattttgcctcctcattacaatattggaac
cctgtgtttgtcttagggacatagtacatagaggatgaagtcacaacaca
ggaattgaattcaaacttggagttcttggcagaaaatttaaagacatgct
ctttttaacagaggttcagattagcagttttgaagaatggtcaatatgtt
gtatcagtgaatctttaaaagacaagtggagagttatacaactttgtctc
agaaatgtttaacaaatataaaataatgctgttgaaatgactcagctatt
aaaagaacttgccacagaacctgacttcaattccatccctggatcccccc
caaaacaacaaaacaatacaaaagtttgatataggagcacatctgtaatc
ccagtgcccctataacaaaatgtgagtggcaggcaaagccaaatgaaata
cccttaagcttgaaggccagttagcctggagcacatagttcagtagaaac
aaaacagagcatcattaatatggtggacaaagggaagcagtacctaaaag
ttccctgaactccacaagctctccatggcatatgtacacacacacacaca
cacacacacacacacacacacacacacacacactttattattattgttgt
tgttattattattcctattatgatgatgatgatgatgatgctgtaaacga
ccaaagagtacacatggagaggcacatggcttcagctgcatatgtagcag
agcatggcttaatttggcatcaatgggaggaaaggcccttggtcctatga
aggccagattacccagggtaggggaatgctagggcggtgaggcagagtgg
atgggttcatgcatggaggagccccctttatagaagcagtgggagggaga
tggggttaggagtttgggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_115723628_115724828
seq2: B6Ng01-066N20.b_48_1229

seq1  GAATTCTAGGTTTATGAGTTTTCTTTGGTGACTTGGAGGGGTTCTGCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGTTTATGAGTTTTCTTTGGTGACTTGGAGGGGTTCTGCAAT  50

seq1  GATGGCTTAGAGGCCATGCTTTGGGTCCCGGACTGCCCCAGGGAATTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTTAGAGGCCATGCTTTGGGTCCCGGACTGCCCCAGGGAATTTCT  100

seq1  TGTAGGAAGGGAGGGAATAAACTCATCTTCCTCCTCACTATCGGAGTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGAAGGGAGGGAATAAACTCATCTTCCTCCTCACTATCGGAGTCTG  150

seq1  ACACTTCTGCTGAGGATACGGACTCTTCCTCTTCTTGGTCGATTTTATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCTGCTGAGGATACGGACTCTTCCTCTTCTTGGTCGATTTTATCA  200

seq1  CCATCTAGAAGCCAAAGCTGTTGCCTAATCTGCTTCAAAGTCAAGAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTAGAAGCCAAAGCTGTTGCCTAATCTGCTTCAAAGTCAAGAGAGA  250

seq1  ATTCCTTCTATGGACACAAGAAGTATGGGTGGGTTCTTTGTGAGTTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTCTATGGACACAAGAAGTATGGGTGGGTTCTTTGTGAGTTTCTT  300

seq1  GTTCTTTTGCCTTTCTCCCAATGTATCCTGTCTGTCAGACCCACAGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTTGCCTTTCTCCCAATGTATCCTGTCTGTCAGACCCACAGAAGG  350

seq1  CACCACTGAAGATCTCAACCCATTCCTGATAGGGCTAAGTGCATTCTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTGAAGATCTCAACCCATTCCTGATAGGGCTAAGTGCATTCTCCA  400

seq1  TACCAAGATTTGTGATCATCATAGCTGAGTCCTAGGCTCTCAGAATCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAGATTTGTGATCATCATAGCTGAGTCCTAGGCTCTCAGAATCACA  450

seq1  CTGCCTTTGGTACAAAAAGGTTGAGCCTGTCCATTTTTTCCTAGAGTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTGGTACAAAAAGGTTGAGCCTGTCCATTTTTTCCTAGAGTTTC  500

seq1  CAAAGCTGAAGAGGGCTTTATTTCACAAGGTTTAGACTTTTTAAGAGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTGAAGAGGGCTTTATTTCACAAGGTTTAGACTTTTTAAGAGGTA  550

seq1  AGGTGGTCTCATAGAAGGCTGCTATTCTTTTAGGTGTTTATTGATAATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTCTCATAGAAGGCTGCTATTCTTTTAGGTGTTTATTGATAATCC  600

seq1  CAGGAGTCACTAGAGCTCTTCTGTGACCGCCTCATGTTAGGCTTCCTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTCACTAGAGCTCTTCTGTGACCGCCTCATGTTAGGCTTCCTGAT  650

seq1  AAAACCTAAGCCATTGAGTTCCAGTGACTTCTTTACACTGGGGGTGACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTAAGCCATTGAGTTCCAGTGACTTCTTTACACTGGGGGTGACAA  700

seq1  TATTAGCAGAAGTCTGGTGAGATTTGGAACTAGAATGACTTGATTTGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGCAGAAGTCTGGTGAGATTTGGAACTAGAATGACTTGATTTGATC  750

seq1  CCTTTGACCTCTTGTTTTGTTGTGTTCCAGGCAGGGCTTTTTACATTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGACCTCTTGTTTTGTTGTGTTCCAGGCAGGGCTTTTTACATTCTT  800

seq1  AATCTTGGCTTTTAAAGGTCTTTGGCACTTGGGAATATCTTCTAGTTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGGCTTTTAAAGGTCTTTGGCACTTGGGAATATCTTCTAGTTTCC  850

seq1  TTAATGCTGCAATCACTTCTAATGGCAATGATACAAAGTCCTTTTTATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGCTGCAATCACTTCTAATGGCAATGATACAAAGTCCTTTTTATTT  900

seq1  CAGGGTAGCTTCACAAACAATGTCTCCTCACTTTTCTGATTCATAGGGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTAGCTTCACAAACAATGTCTCCTCACTTTTCTGATTCATAGGGAT  950

seq1  CAGTTCTTCTGGGTCTAATGCCACCTGAACAGGGCCAATGATGGTCTCCA  1000
      ||||||||||||||||||||||||||||||||| |  |||||||||||||
seq2  CAGTTCTTCTGGGTCTAATGCCACCTGAACAGGTC--ATGATGGTCTCCA  998

seq1  TAGAAACGTTATCACTGTCAGAACAGTCAAACCAGAATATCTCCTGTGCA  1050
      |||||||| |||||||||||||||||||||  |||||   ||||||||||
seq2  TAGAAACG-TATCACTGTCAGAACAGTCAA--CAGAAATACTCCTGTGCA  1045

seq1  GGAGGA-CTCTGGCCTAACAAGTGCCTTTTTGAGATAGAAATCTCAAAGA  1099
      |||||| |||||| |||   |||||  |||||||||   |||||| ||||
seq2  GGAGGACCTCTGG-CTA--CAGTGC--TTTTGAGATTAGAATCTC-AAGA  1089

seq1  ATCGAACAAACCATTATATTCGTGCACATTTCTTGGGAGGAAATTCAGAT  1149
      ||||||||||||||  |||||||||||||||| | ||| ||||||| |||
seq2  ATCGAACAAACCAT--TATTCGTGCACATTTCCT-GGAAGAAATTCTGAT  1136

seq1  CCATTTTGAAATAATCCAATTAGTTTAGCAACATAGGGCTTTTTATTATC  1199
       || || |||||||| |||||||||  |  ||||| ||||||||| ||||
seq2  TCA-TTGGAAATAAT-CAATTAGTT--GGCACATA-GGCTTTTTA-TATC  1180

seq1  TT  1201
      ||
seq2  TT  1182

seq1: chr7_115856021_115856940
seq2: B6Ng01-066N20.g_67_986 (reverse)

seq1  TCCCCAAACTCCTAACCCCATCTCCCTCCCACTGCTTCTAT-AAGGGGGC  49
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCCCCAAACTCCTAACCCCATCTCCCTCCCACTGCTTCTATAAAGGGGGC  50

seq1  TCCTCCATGCATGAACCCATCCACTCCTGCCTCACCGCCCTAGCATTCCC  99
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCCTCCATGCATGAACCCATCCACT-CTGCCTCACCGCCCTAGCATTCCC  99

seq1  CTACCCTGGGTAATCTGGCCTTCATAGGACCAAGGGCCTTTCCTCCCATT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCTGGGTAATCTGGCCTTCATAGGACCAAGGGCCTTTCCTCCCATT  149

seq1  GATGCCAAATTAAGCCATGCTCTGCTACATATGCAGCTGAAGCCATGTGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCAAATTAAGCCATGCTCTGCTACATATGCAGCTGAAGCCATGTGC  199

seq1  CTCTCCATGTGTACTCTTTGGTCGTTTACAGCATCATCATCATCATCATC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCATGTGTACTCTTTGGTCGTTTACAGCATCATCATCATCATCATC  249

seq1  ATAATAGGAATAATAATAACAACAACAATAATAATAAAGTGTGTGTGTGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAGGAATAATAATAACAACAACAATAATAATAAAGTGTGTGTGTGT  299

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATATGCCATGGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATATGCCATGGA  349

seq1  GAGCTTGTGGAGTTCAGGGAACTTTTAGGTACTGCTTCCCTTTGTCCACC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGTGGAGTTCAGGGAACTTTTAGGTACTGCTTCCCTTTGTCCACC  399

seq1  ATATTAATGATGCTCTGTTTTGTTTCTACTGAACTATGTGCTCCAGGCTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAATGATGCTCTGTTTTGTTTCTACTGAACTATGTGCTCCAGGCTA  449

seq1  ACTGGCCTTCAAGCTTAAGGGTATTTCATTTGGCTTTGCCTGCCACTCAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCTTCAAGCTTAAGGGTATTTCATTTGGCTTTGCCTGCCACTCAC  499

seq1  ATTTTGTTATAGGGGCACTGGGATTACAGATGTGCTCCTATATCAAACTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTATAGGGGCACTGGGATTACAGATGTGCTCCTATATCAAACTT  549

seq1  TTGTATTGTTTTGTTGTTTTGGGGGGGATCCAGGGATGGAATTGAAGTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTGTTTTGTTGTTTTGGGGGGGATCCAGGGATGGAATTGAAGTCA  599

seq1  GGTTCTGTGGCAAGTTCTTTTAATAGCTGAGTCATTTCAACAGCATTATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGTGGCAAGTTCTTTTAATAGCTGAGTCATTTCAACAGCATTATT  649

seq1  TTATATTTGTTAAACATTTCTGAGACAAAGTTGTATAACTCTCCACTTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTGTTAAACATTTCTGAGACAAAGTTGTATAACTCTCCACTTGT  699

seq1  CTTTTAAAGATTCACTGATACAACATATTGACCATTCTTCAAAACTGCTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAAGATTCACTGATACAACATATTGACCATTCTTCAAAACTGCTA  749

seq1  ATCTGAACCTCTGTTAAAAAGAGCATGTCTTTAAATTTTCTGCCAAGAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAACCTCTGTTAAAAAGAGCATGTCTTTAAATTTTCTGCCAAGAAC  799

seq1  TCCAAGTTTGAATTCAATTCCTGTGTTGTGACTTCATCCTCTATGTACTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTTTGAATTCAATTCCTGTGTTGTGACTTCATCCTCTATGTACTA  849

seq1  TGTCCCTAAGACAAACACAGGGTTCCAATATTGTAATGAGGAGGCAAAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTAAGACAAACACAGGGTTCCAATATTGTAATGAGGAGGCAAAAT  899

seq1  CACAGCTCTACAGTTGAATTC  920
      |||||||||||||||||||||
seq2  CACAGCTCTACAGTTGAATTC  920