BAC Information

Click to search

BAC

Clone NameB6Ng01-067A19
Chromosome7 (Build37)
Map Location 34,241,384 - 34,242,497
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962
Downstream geneEG626970, LOC100043859, LOC627004, LOC100043398, LOC100043401, Scgb2b1, LOC668440, Abpz, LOC100043860, LOC627079, LOC635803, Abpg, LOC100043864, LOC100043865, Abpb, Abpa, LOC100043866, LOC100043867, LOC100043868, Wtip, Sae2, LOC100043410, Pdcd2l, Gpi1, 4931406P16Rik, EG619734, Lsm14a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067A19.g
ACCDH886057
length1,103
definitionDH886057|Mus musculus domesticus DNA, BAC clone: B6Ng01-067A19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagatgacccttcgaccgactgtacctgggccagaggggagcat
ctcccactgcacagggacataaggggactgttgggaagggtgctaatagg
caaggttgtggtagggcccctgctacccgcaccttgtaagcagactgctt
aaccccatttattcggattggcgatacactggccaccctggaattgccat
tttaggattcataaaatggttcttttgacatcacatttgtccttcttatg
gatgtgtgggctgaacaaacaccaatggaggaggctgaagacagcagagc
aaagcctgaggcagacatgtaaaggctgaagtgtcagcccgatgagctgt
aaaatatgccaagagtcttactgctctatggtagctgaagatagggtcat
ggaatgaagagagggcagaggcagactctgaggaataacacaagggattc
acaattcacgataattatatcccaattgccacaaggggtctaggaagctg
tacaatatttggagactacattaggaccaggagactcatcttggcagagt
gccaaaaaggctcagcttcctgtccatgctgtggaggatctgcagcacag
gtaggcctcaaggtcacatgctagtaagaggactgctcatgagagtatac
cactgctgcctctaccacctgccaatatttggagttagtcccttgctgat
gtgtattcaaatgctaagtactttaccccagggaatggaatctcccaaac
ctccaactacttgccaatctctttaacaaattgtcacatacaccagatgt
tgcttagtaaatcagttcacctaaatctctgactatctaagaaaatgtga
atgccagtcatgatggagagaagagagatattctaggctttttttccctt
ggataaatatgtatttcatttatagccactctctgctaattgttggaaac
attgtgggcagtgaagaagctgaaaacgcctgggaggcatcctcctactt
gagcacatttttttctttgtgattgaggggatcacacaaagtaactcaag
acaccctgcatcagctcccaggagtggggacacgggtaagccactatatc
ttc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_34241384_34242497
seq2: B6Ng01-067A19.g_67_1169 (reverse)

seq1  GAAGATATAGTGCTTCTCACCTGTGGTCCCCACTCATGGGAAGTTGATGC  50
      ||||||||||||   || ||| || |||||||||| |||| || ||||||
seq2  GAAGATATAGTG--GCTTACCCGT-GTCCCCACTCCTGGG-AGCTGATGC  46

seq1  AGGTGTGTC-TGAGTTACCTTTGTGTGATCCCCTCAATCACAAAGAAAAA  99
      ||| ||||| ||||||| ||||||||||||||||||||||||||||||||
seq2  AGG-GTGTCTTGAGTTA-CTTTGTGTGATCCCCTCAATCACAAAGAAAAA  94

seq1  ATTGTGCTCAGGTAGGAGGATGCTCTCCCAGGCCGTTTTCAGCTTCTTCA  149
      | |||||||| |||||||||||| |||||||| |||||||||||||||||
seq2  AATGTGCTCAAGTAGGAGGATGC-CTCCCAGG-CGTTTTCAGCTTCTTCA  142

seq1  CTGCCCACCATGTTTCACAACAATTAGCAGAGAGTGGCTATAAATGAAAT  199
      |||||||| ||||||| |||||||||||||||||||||||||||||||||
seq2  CTGCCCACAATGTTTC-CAACAATTAGCAGAGAGTGGCTATAAATGAAAT  191

seq1  ACATATTTTATCCCAAGGGAAAAAAAGCCTAGAATATCTCTCTTCTCTCC  249
      ||||| ||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACATA-TTTAT-CCAAGGGAAAAAAAGCCTAGAATATCTCTCTTCTCTCC  239

seq1  ATCATTGACTGGCATTCACATTTTCTTAGATAGTCAGAGATTTAGGTGAA  299
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCA-TGACTGGCATTCACATTTTCTTAGATAGTCAGAGATTTAGGTGAA  288

seq1  CTGATTTACTAAGCAACATCTGGTGTATGTGACAATTTGTTAAAGAGATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTACTAAGCAACATCTGGTGTATGTGACAATTTGTTAAAGAGATT  338

seq1  GGCAAGTAGTTGGAGGTTTGGGAGATTCCATTCCCTGGGGTAAAGTACTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGTAGTTGGAGGTTTGGGAGATTCCATTCCCTGGGGTAAAGTACTT  388

seq1  AGCATTTGAATACACATCAGCAAGGGACTAACTCCAACTATTGGCAGGTG  449
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGCATTTGAATACACATCAGCAAGGGACTAACTCCAAATATTGGCAGGTG  438

seq1  GTAGAGGCAGCAGTGGTATACTCTCCTGAGCAGTCCTCTTACTAGCATGT  499
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GTAGAGGCAGCAGTGGTATACTCTCATGAGCAGTCCTCTTACTAGCATGT  488

seq1  GACCCTGAGGCCTACCTGTGCTGCAGATCCTCCACAGCATGGACAGGAAG  549
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGAGGCCTACCTGTGCTGCAGATCCTCCACAGCATGGACAGGAAG  538

seq1  CTGAGCCTTTCTGGCACTCTGCCAAGATGAGTCTCCTGGTCCTAATGTAG  599
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCTTTTTGGCACTCTGCCAAGATGAGTCTCCTGGTCCTAATGTAG  588

seq1  TCTCCAAATATTGTACAGCTTCCTAGACCCCTTCTGGCAATTGGGATCTA  649
      ||||||||||||||||||||||||||||||||| ||||||||||||| ||
seq2  TCTCCAAATATTGTACAGCTTCCTAGACCCCTTGTGGCAATTGGGATATA  638

seq1  ATTATCCTGACTTGTGAATCCCTTGTGTTATTCCTCAGAGTCTGCCTCTG  699
      |||||| ||| |||||||||||||||||||||||||||||||||||||||
seq2  ATTATCGTGAATTGTGAATCCCTTGTGTTATTCCTCAGAGTCTGCCTCTG  688

seq1  CCCTCTCTTCATTCCATGACCCTATCTTCAGCTACCATAGAGCAGTAAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCTTCATTCCATGACCCTATCTTCAGCTACCATAGAGCAGTAAGA  738

seq1  CTCTTGGCCTATTTTACAGCTCATCCTGCTGACACTTCAGCCTTTACATG  799
      |||||||| ||||||||||||||||  |||||||||||||||||||||||
seq2  CTCTTGGCATATTTTACAGCTCATCGGGCTGACACTTCAGCCTTTACATG  788

seq1  TCTGCCTCAGGCTTTGCTCTGCTGTCTTCAGCCTCCTCCATTGGTGTTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCAGGCTTTGCTCTGCTGTCTTCAGCCTCCTCCATTGGTGTTTG  838

seq1  TTCAGCCCACACATCCATAAGAAGGACAAATGTGCTGTCAAAAGAACCAT  899
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTCAGCCCACACATCCATAAGAAGGACAAATGTGATGTCAAAAGAACCAT  888

seq1  TTTATGAATCCTAAAATGGCAATTCCAGGGTGGCCAGTGTATCGCCAATC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAATCCTAAAATGGCAATTCCAGGGTGGCCAGTGTATCGCCAATC  938

seq1  TGAATAAATGGGGTTAAGCAGTCTGCTTACAAGGTGCCTGTAGCAGGGGC  999
       ||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  CGAATAAATGGGGTTAAGCAGTCTGCTTACAAGGTGCGGGTAGCAGGGGC  988

seq1  CCTACCACAACCTTGCCTCTTAGCACCCTTCCCAACAGTCCCCTTATGTC  1049
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCTACCACAACCTTGCCTATTAGCACCCTTCCCAACAGTCCCCTTATGTC  1038

seq1  CCTGTGCAGTGGGAGATGCTCCCCTCTGGCCCAGGTACAGTCGGTTGAAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCTGTGCAGTGGGAGATGCTCCCCTCTGGCCCAGGTACAGTCGGTCGAAG  1088

seq1  GGTCATCTGGAATTC  1114
      |||||||||||||||
seq2  GGTCATCTGGAATTC  1103