BAC Information

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BAC

Clone NameB6Ng01-068K04
Chromosome7 (Build37)
Map Location 123,650,445 - 123,803,782
singlet/doubletdoublet
Overlap geneNucb2, LOC100043320, EG668484, LOC668485
Upstream geneSox6, LOC100042779, 1110006G14Rik, EG668479, LOC100043313, 1110004F10Rik, Plekha7, Rps13, Pik3c2a, LOC100042798
Downstream geneLOC546993, LOC100043330, Xylt1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068K04.bB6Ng01-068K04.g
ACCDH887165DH887166
length159976
definitionDH887165|Mus musculus domesticus DNA, BAC clone: B6Ng01-068K04, 5' end.DH887166|Mus musculus domesticus DNA, BAC clone: B6Ng01-068K04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,650,445 - 123,650,603)(123,802,802 - 123,803,782)
sequence
gaattcaaggattataggcagtagacaccacatcccattttaatccagtt
ttatagttaggaaaatcaagactcagaaaatcaagtttcagactaagaat
ggagctctatcttagcatacattcaattcccagcacggggcggggggcgg
gggggagga
gaattctaagttgtggaccatcttagggccagttggtcggcaaggaaaac
cagccctgattttacactgtcagactgtgtttactcttaaggagatttgt
tagaagagaatctaaagaagaacctgatttaaagagaatctgaaatgcaa
ttggtttcaacagtgagactgcaagtctctttttggacatgtatctgtta
taccaagtgatacactgtataaggacgtttttcttcttttaattttttga
gattataatataattacataattttctttcctccctttagacctttccat
aagcctgtctttcccttttttgaagttcttggcctcttttctaattgatt
gatgttatgtgcatatatgtgcatgtatatacatatatgtacatgtatat
acatatgcctacatttgaccatttactccttcccaccctctctcatcttc
cttactcttccctccttctcaaatactccccctcctggttttgtcttgtt
ttgttttactatttttccagttttagttttattgtgtgtatgtatgtgaa
tgtgtgttgtgtgtaggtgcacatgtgcctactttctcaggaaagccagg
ggaggacatcatttgttctgccatatcagtctctgctgtattcccatgag
acagaatttctccctgaacctagagataggctggtggccaaggagccctc
tagaggctccacccacacccacactgcagagctaggctcactggcacacg
aagttacacctgggcacttttatatagattcaagattttttaatcaggtc
cttattctttcccagtgagtgctcctatgcaaggtcatcttctagagcct
gtccattttcatgtcatatgtagaaaatgtattatacatggactaggttc
ccactgagaaacataagtcacctgtctttctagataagaatgtaattgcc
taaagagcagaagctggactggggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_123650445_123650603
seq2: B6Ng01-068K04.b_35_193

seq1  GAATTCAAGGATTATAGGCAGTAGACACCACATCCCATTTTAATCCAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGATTATAGGCAGTAGACACCACATCCCATTTTAATCCAGTT  50

seq1  TTATAGTTAGGAAAATCAAGACTCAGAAAATCAAGTTTCAGACTAAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTTAGGAAAATCAAGACTCAGAAAATCAAGTTTCAGACTAAGAAT  100

seq1  GGAGCTCTATCTTAGCATACATTCAATTCCCAGCACGGGGCGGGGGGCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTCTATCTTAGCATACATTCAATTCCCAGCACGGGGCGGGGGGCGG  150

seq1  GGGGGAGGA  159
      |||||||||
seq2  GGGGGAGGA  159

seq1: chr7_123802802_123803782
seq2: B6Ng01-068K04.g_68_1043 (reverse)

seq1  GGCCCCAGTCCAGCTTCCTGCTCTTTTAGGCAGTTAACATTC-TATCTAG  49
      |||||||||||||||| |||||| |||||||| || |||||| |||||||
seq2  GGCCCCAGTCCAGCTT-CTGCTC-TTTAGGCAATT-ACATTCTTATCTAG  47

seq1  AAAGACAGGTGACTTATGTTTTCTCAGTGTGGAACCTAGTCCATGTATAA  99
      |||||||||||||||||| |||||||||| ||||||||||||||||||||
seq2  AAAGACAGGTGACTTATG-TTTCTCAGTG-GGAACCTAGTCCATGTATAA  95

seq1  TACATATTTCTACATATGACATGAAAATGGACAGGCTCTTAGAAGATGAC  149
      ||||| |||||||||||||||||||||||||||||||| |||||||||||
seq2  TACAT-TTTCTACATATGACATGAAAATGGACAGGCTC-TAGAAGATGAC  143

seq1  CTTGCATAGGAGCACTCACTGGGAAAGAATAAGGACCTGATT-AAAAATC  198
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTTGCATAGGAGCACTCACTGGGAAAGAATAAGGACCTGATTAAAAAATC  193

seq1  TTGAATCTATATAAAAGTGCCCAGGTGTAACTTCGTGTGCCAGTGAGCCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCTATATAAAAGTGCCCAGGTGTAACTTCGTGTGCCAGTGAGCCT  243

seq1  AGCTCTGCAGTGTGGGTGTGGGTGGAGCCTCTAGAGGGCTCCTTGGCCAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGCAGTGTGGGTGTGGGTGGAGCCTCTAGAGGGCTCCTTGGCCAC  293

seq1  CAGCCTATCTCTAGGTTCAGGGAGAAATTCTGTCTCATGGGAATACAGCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTATCTCTAGGTTCAGGGAGAAATTCTGTCTCATGGGAATACAGCA  343

seq1  GAGACTGATATGGCAGAACAAATGATGTCCTCCCCTGGCTTTCCTGAGAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGATATGGCAGAACAAATGATGTCCTCCCCTGGCTTTCCTGAGAA  393

seq1  AGTAGGCACATGTGCACCTACACACAACACACATTCACATACATACACAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGCACATGTGCACCTACACACAACACACATTCACATACATACACAC  443

seq1  AATAAAACTAAAACTGGAAAAATAGTAAAACAAAACAAGACAAAACCAGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACTAAAACTGGAAAAATAGTAAAACAAAACAAGACAAAACCAGG  493

seq1  AGGGGGAGTATTTGAGAAGGAGGGAAGAGTAAGGAAGATGAGAGAGGGTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAGTATTTGAGAAGGAGGGAAGAGTAAGGAAGATGAGAGAGGGTG  543

seq1  GGAAGGAGTAAATGGTCAAATGTAGGCATATGTATATACATGTACATATA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAGTAAATGGTCAAATGTAGGCATATGTATATACATGTACATATA  593

seq1  TGTATATACATGCACATATATGCACATAACATCAATCAATTAGAAAAGAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATACATGCACATATATGCACATAACATCAATCAATTAGAAAAGAG  643

seq1  GCCAAGAACTTCAAAAAAGGGAAAGACAGGCTTATGGAAAGGTCTAAAGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGAACTTCAAAAAAGGGAAAGACAGGCTTATGGAAAGGTCTAAAGG  693

seq1  GAGGAAAGAAAATTATGTAATTATATTATAATCTCAAAAAATTAAAAGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAGAAAATTATGTAATTATATTATAATCTCAAAAAATTAAAAGAA  743

seq1  GAAAAACGTCCTTATACAGTGTATCACTTGGTATAACAGATACATGTCCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACGTCCTTATACAGTGTATCACTTGGTATAACAGATACATGTCCA  793

seq1  AAAAGAGACTTGCAGTCTCACTGTTGAAACCAATTGCATTTCAGATTCTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGACTTGCAGTCTCACTGTTGAAACCAATTGCATTTCAGATTCTC  843

seq1  TTTAAATCAGGTTCTTCTTTAGATTCTCTTCTAACAAATCTCCTTAAGAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATCAGGTTCTTCTTTAGATTCTCTTCTAACAAATCTCCTTAAGAG  893

seq1  TAAACACAGTCTGACAGTGTAAAATCAGGGCTGGTTTTCCTTGCCGACCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACAGTCTGACAGTGTAAAATCAGGGCTGGTTTTCCTTGCCGACCA  943

seq1  ACTGGCCCTAAGATGGTCCACAACTTAGAATTC  981
      |||||||||||||||||||||||||||||||||
seq2  ACTGGCCCTAAGATGGTCCACAACTTAGAATTC  976