BAC Information

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BAC

Clone NameB6Ng01-068K17
Chromosome7 (Build37)
Map Location 113,742,492 - 113,743,670
singlet/doubletsinglet
Overlap geneGm1966
Upstream geneHpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, Gvin1, LOC672660, LOC100042097, LOC668128, LOC634394, EG209380, EG668139
Downstream geneLOC100042141, Olfr693, Olfr694, Olfr695, Olfr696-ps1, Olfr697, Olfr698, Olfr699, Olfr700, Olfr701, Olfr702, Olfr703, Olfr704, Olfr705, Olfr706, Olfr707, Olfr708, Olfr709-ps1, Olfr710, LOC384651, Olfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik, Syt9, Olfml1, Ppfibp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068K17.bB6Ng01-068K17.g
ACCDH887189DH887190
length1,2791,150
definitionDH887189|Mus musculus domesticus DNA, BAC clone: B6Ng01-068K17, 5' end.DH887190|Mus musculus domesticus DNA, BAC clone: B6Ng01-068K17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgaaaatcttaggcaaatggatgtatctggaggatatcatcct
gagtgaggtaacccaatcacaaaagaaaacacttaatatccaaaatatac
aaagaactcaagaatttagactttagagaagcaaataactctagtaaaat
tggggttcagagctaaacaaagtattttcaactgaggaatgtcaaatggc
tgagatacacttaaaggaatgttcaacatccttagtcatcaggaaaatgc
aaatcgaaagaccctaagattctatatcacaccagtcagaatggctcaga
taaaagaactcaagtgacagcagatgctggtgaggatatggagacagagg
aacactcctctatttttggtgggagttactacaaccactctggaaattag
tctggcagttccaaagaaaatttaacattgtactacctgaggatacatca
ataccactcctgggcatatacccagaagatgatccaacttgtaataagaa
cacatgttccactatgttcatagcagccttaattataaaagccagatgct
ggaaacagatgtcccttaacagaggaatgggtacagacgatgttgtacat
ttacacaatggattactactcagctattaaaaacaatgacttcatcaaag
cccgaaagtttgaaagttcgaaataccaaagacacagacttttagggaat
gctaaagtgtggattcttcagtgcttcttagaagggggaacaaagtactc
atgggagaaatacaaggacaaagtgtggaggagagaatgaagtaaaggtc
atctggagactgccccacctgggaatcaggacttttacactattgtggat
gcagggaagtgcttgctgatggggaacctgatatggctgtttcctgagag
gctctgccaaagcctgacaatacagaattggatgcctgttgccagccatt
ggactgaatgtggggtccctgatggaggagtgagagggactgaggattga
agtggtttgcagccgcaggggggagcagatgtcaatcagccagcccctga
agcatcagggctgacactgtactgcctagtttgtcagttgatgaccagct
gaatatccaggaaaggactcagttgaggatgctcatggaatcaccggagc
attttccaattgtacagggagcctttgggtggacccatctgctgacttgg
ttctaatggacgtctgtacgagatcgtgtggatggcgatgcgtaatagca
tcctccctcattgtccctgtcgtacgtac
gaattctatcatctgagagaaaaggggaatcggagcatagaactacacaa
gagtgagattgaaacagagaaaagaataattcgacgtcaacagttggaaa
aagcctttcctctcagtgatttaatgtgctctgttcttggactcctccaa
tactactcagaaacccataacaaactctactttttgcagtggctcactct
gttttttgacaacctgacaatagaacaccgggaaaaattacatgaaaagc
agagatctttgtggttaaggatacaaacagaaaagcaaagagaacagaag
agtgcctacctgacacactgtcagaagcacatggatgccatctccgtaga
gattcatgactgtactttaggaattgagcaccttctccgagaagttggcc
agatctatgaagctctggaagaaacttctccctctagagatagccttttt
ctttacctacctcaaattgctgcagacctgatgatagctggtgttcccat
tgagctgatggatggggatgcttcatatgtgcctctaaggtgggtagcag
ctatttttgacaaggtctcagagaaagttaaagacaaaaggatgtttgtt
ctctctgcccttggcctgcagagctcagggaagtctaccctgctgaatgc
cctgtttgggctgcagttcacagtcagtgcaggcaggtgtaccaatgggg
cctatatgcagctcctgaaggtggaagagacattcacaaaaagaactcgg
ctttacatatgtgcttgttatagacacagaaggacttcgggctccagaac
tcaacaacaaatctcagaattgggaccatgagttggcaacattagtcatt
ggtcttggaacttgactctgatcaatatttttggggagaatctctcagag
attcaggacattctacaaatatctgttcaagcatttctgagaatgaaaca
agtaatatctccccagtgcctcttgtccatcaaatgtgggaaaagtcaca
gcaaagaccaaactatggagacgagaaactgaaccaaactgatgaaatga
ctgcttggctgctgatggaagatgctcaaattacagcttcatgagaattg
agttgagtccatggatgtctacactttgtcaccctctgggatgtaatccc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_113742492_113743670
seq2: B6Ng01-068K17.g_71_1220 (reverse)

seq1  GGGATTACCATCCCAGA-GGTGAGCAAAGTAGTAGACATGCCAATTGGCA  49
      ||||||| ||||||||| ||||| |||||| |||||||| |||  |||  
seq2  GGGATTA-CATCCCAGAGGGTGA-CAAAGT-GTAGACAT-CCA--TGGAC  44

seq1  TCAAACTCAATTACATCACTGAAGCTGGTTATGTTTGAGCACTCTTCCAA  99
      || |||||||||   ||| ||||||||  ||  |||||||| ||||||| 
seq2  TC-AACTCAATT--CTCA-TGAAGCTG--TA-ATTTGAGCA-TCTTCCA-  85

seq1  CTCAGCAGCCAATGCAGTCATTTCATCCAGTTTCTGCTCCAGTCTCCTCC  149
       ||||||||||| ||||||||||||| |||||  || | |||| ||   |
seq2  -TCAGCAGCCAA-GCAGTCATTTCAT-CAGTT--TGGTTCAGTTTC--TC  128

seq1  GTCCTTCCATAGTTTGGTCTTTTGCTGTGACTTCTCCCACATTTTGATGG  199
      |||  |||||||||||||| ||||||||||||| ||||||| ||||||||
seq2  GTC--TCCATAGTTTGGTC-TTTGCTGTGACTTTTCCCACA-TTTGATGG  174

seq1  ACAAAGAGGCAACTGGGGGAGATATTTACTTGTTTCATTCTCAGAAATGC  249
      || ||||||| ||| ||||||||| |||||||||||||||||||||||||
seq2  AC-AAGAGGC-ACT-GGGGAGATA-TTACTTGTTTCATTCTCAGAAATGC  220

seq1  TTGAACAGATATTTGTAGAATGTCCTGAATCTCTGAGGGATTCTCCCCAA  299
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTGAACAGATATTTGTAGAATGTCCTGAATCTCTGAGAGATTCTCCCCAA  270

seq1  AAATATTGATCAGAGTCAAGTTTCCAAGACCAATGACTAATGTTGCCAAC  349
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAATATTGATCAGAGTCAAG-TTCCAAGACCAATGACTAATGTTGCCAAC  319

seq1  TCATGGTCCCAATTCTGAGATTTGTTGTTGAGTTCTGGAGCCCGAAGTCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTCCCAATTCTGAGATTTGTTGTTGAGTTCTGGAGCCCGAAGTCC  369

seq1  TTCTGTGTCTATAACAAGCACATATGTAAAGCCGAGTTC-TTTTGTGAAT  448
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTCTGTGTCTATAACAAGCACATATGTAAAGCCGAGTTCTTTTTGTGAAT  419

seq1  GTCTCTTCCACCTTCAGGAGCTGCATATAGGCCCCATTGGTACACCTGCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTCCACCTTCAGGAGCTGCATATAGGCCCCATTGGTACACCTGCC  469

seq1  TGCACTGACTGTGAACTGCAGCCCAAACAGGGCATTCAGCAGGGTAGACT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGACTGTGAACTGCAGCCCAAACAGGGCATTCAGCAGGGTAGACT  519

seq1  TCCCTGAGCTCTGCAGGCCAAGGGCAGAGAGAACAAACATCCTTTTGTCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGAGCTCTGCAGGCCAAGGGCAGAGAGAACAAACATCCTTTTGTCT  569

seq1  TTAACTTTCTCTGAGACCTTGTCAAAAATAGCTGCTACCCACCTTAGAGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTTCTCTGAGACCTTGTCAAAAATAGCTGCTACCCACCTTAGAGG  619

seq1  CACATATGAAGCATCCCCATCCATCAGCTCAATGGGAACACCAGCTATCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATGAAGCATCCCCATCCATCAGCTCAATGGGAACACCAGCTATCA  669

seq1  TCAGGTCTGCAGCAATTTGAGGTAGGTAAAGAAAAAGGCTATCTCTAGAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCTGCAGCAATTTGAGGTAGGTAAAGAAAAAGGCTATCTCTAGAG  719

seq1  GGAGAAGTTTCTTCCAGAGCTTCATAGATCTGGCCAACTTCTCGGAGAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGTTTCTTCCAGAGCTTCATAGATCTGGCCAACTTCTCGGAGAAG  769

seq1  GTGCTCAATTCCTAAAGTACAGTCATGAATCTCTACGGAGATGGCATCCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCAATTCCTAAAGTACAGTCATGAATCTCTACGGAGATGGCATCCA  819

seq1  TGTGCTTCTGACAGTGTGTCAGGTAGGCACTCTTCTGTTCTCTTTGCTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTCTGACAGTGTGTCAGGTAGGCACTCTTCTGTTCTCTTTGCTTT  869

seq1  TCTGTTTGTATCCTTAACCACAAAGATCTCTGCTTTTCATGTAATTTTTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTGTATCCTTAACCACAAAGATCTCTGCTTTTCATGTAATTTTTC  919

seq1  CCGGTGTTCTATTGTCAGGTTGTCAAAAAACAGAGTGAGCCACTGCAAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTGTTCTATTGTCAGGTTGTCAAAAAACAGAGTGAGCCACTGCAAAA  969

seq1  AGTAGAGTTTGTTATGGGTTTCTGAGTAGTATTGGAGGAGTCCAAGAACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGTTTGTTATGGGTTTCTGAGTAGTATTGGAGGAGTCCAAGAACA  1019

seq1  GAGCACATTAAATCACTGAGAGGAAAGGCTTTTTCCAACTGTTGACGTCG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACATTAAATCACTGAGAGGAAAGGCTTTTTCCAACTGTTGACGTCG  1069

seq1  AATTATTCTTTTCTCTGTTTCAATCTCACTCTTGTGTAGTTCTATGCTCC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTCTTTTCTCTGTTTCAATCTCACTCTTGTGTAGTTCTATGCTCC  1119

seq1  GATTCCCCTTTTCTCTCAGATGATAGAATTC  1179
      |||||||||||||||||||||||||||||||
seq2  GATTCCCCTTTTCTCTCAGATGATAGAATTC  1150