BAC Information

Click to search

BAC

Clone NameB6Ng01-068L23
Chromosome7 (Build37)
Map Location 99,334,398 - 99,335,597
singlet/doubletsinglet
Overlap geneDlg2
Upstream genenone
Downstream geneCcdc90b, Ankrd42, Pcf11, LOC676240, LOC100040007, 4632427E13Rik, Rab30, 4632434I11Rik, Prcp, A830059I20Rik, LOC100040298
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068L23.bB6Ng01-068L23.g
ACCDH887244DH887245
length1,1571,186
definitionDH887244|Mus musculus domesticus DNA, BAC clone: B6Ng01-068L23, 5' end.DH887245|Mus musculus domesticus DNA, BAC clone: B6Ng01-068L23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaaactgaggaagaacgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcgtcagggaaatgcaaatcaaaacaactttgagat
tccacctcacactagtcagaatggctaatatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagagaaacactcctcccattgctggt
gggattgcaagcttgtacaaccactctggaagtcagtctggaggttcctg
agaaaattggacatagtactaccagaagatctagcaatacctctcctggg
catatacccagaagaagttccaactggtaataagaacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tatccctcaacagaagaatggatacagaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaataatgaatttatgaaattcttggaca
aatggatgcatctggaggatatcatccttagtgaggtaacctaatcacaa
aacaagttattagatatgcactcattgataagtggatattagctcagaaa
catagaatacccaagatacaatttgcaaaacacaagacaatcaagaagag
ggaaccaacgagtggatacttcattcctccttagaatagggaacagaata
cccatgaaaggagttacagagacaaagtttggaggcaagacgaaagaatg
gactatccagagactaccccatccagggatccatcccataatcagccacc
aaactcagacactattgcatattcaaaattttgttgaagggactctggta
tagctgtctcatatgaggctatgccagtgcttggcaaatacagaagtgga
tgctcacagtcatctataagatggaacacagggccctcaatggagaagct
agagaaagcaccaagtgctgaatgggtctgcaccccatagatgggacaac
aacatgaactaaccataccccagagctcgtgtctgtagctgcatatgtag
caaagatgcttagtgccatcactgggaagaaagtcccttgtattgcaaac
ttatattgcccagtcaagggaatgccaggacagaaattggagtggtggta
aggatta
gaattctagagcaccttcttcacttcttttgaggagggaggtgttatcgg
gtttttaaagttagtttattttagttgtgtgtgtgagagtgtgggtgcgc
atgtgggagaacatgcatgcagaggtcatagagcatctctcaggagtcag
ttcttatcttccaccttgttgagacagggtctctcttgctgctgtgctgt
gtactccaggctaggtggcctgtgggatttcaaaccatccatccccctgt
ttcttccttccatctcaccataggcatgctggggttacagttgtggccat
cacagctgacattttgtttttgtgggttcttgggatcacaggatcacatt
caggttgtcaggcttgcatgattagtacttttatccacttttgtcatgtc
ttttaaagtctttctttcctcctcttccttgtctttctcttcctcctcct
cttcccttaaaacaaacacagtctttcacctctgagttcttagaaaactc
tgcagacttgattgaaacatctggcttctgctcttgtgcttcccctggct
ggttggcacagaaagcgcatgggctatttttgcctctcaccacctttggc
attacccatgcatgcctctggcattacccatgcatggttgttctccttga
agaggcacggccacgcagccattagtctctcaaggtcctagaattctttc
agggaaccgcagtggctgcactaaaatggtcttgactacattgtgtagtg
tgatacatagatggaggccaggggaagtttactcagtcactttgtggggg
actaaggctagagactgtttttcttccatgttctttttgagtcttggatg
agtaagattagcattcttttggactctggagaatcagtccaccaaattct
tttgcaatctctcctttgggtggtgttaaaaaggcattttcatagcttta
aggagcaagacattaagaacatggtgttaccagattcctctcctcttgaa
ttgaatccttctcttggaaagggctgcttgctgcaggggcttctcaatta
ataaatcaatatcggtttggtgtctcatctggagtacccaggtaaaagat
tctgagaaaacatctaagggtctttgggggaactacttcttattcttaaa
caaaattccaggaaaaccccttaaaagaaaaaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_99334398_99335597
seq2: B6Ng01-068L23.g_67_1252

seq1  GAATTCTAGAGCACCTTCTTCACTTCTTTTGAGGAGGGAGGTGTTATCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAGCACCTTCTTCACTTCTTTTGAGGAGGGAGGTGTTATCGG  50

seq1  GTTTTTAAAGTTAGTTTATTTTAGTTGTGTGTGTGAGAGTGTGGGTGCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAAAGTTAGTTTATTTTAGTTGTGTGTGTGAGAGTGTGGGTGCGC  100

seq1  ATGTGGGAGAACATGCATGCAGAGGTCATAGAGCATCTCTCAGGAGTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGAGAACATGCATGCAGAGGTCATAGAGCATCTCTCAGGAGTCAG  150

seq1  TTCTTATCTTCCACCTTGTTGAGACAGGGTCTCTCTTGCTGCTGTGCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATCTTCCACCTTGTTGAGACAGGGTCTCTCTTGCTGCTGTGCTGT  200

seq1  GTACTCCAGGCTAGGTGGCCTGTGGGATTTCAAACCATCCATCCCCCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCCAGGCTAGGTGGCCTGTGGGATTTCAAACCATCCATCCCCCTGT  250

seq1  TTCTTCCTTCCATCTCACCATAGGCATGCTGGGGTTACAGTTGTGGCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTTCCATCTCACCATAGGCATGCTGGGGTTACAGTTGTGGCCAT  300

seq1  CACAGCTGACATTTTGTTTTTGTGGGTTCTTGGGATCACAGGATCACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTGACATTTTGTTTTTGTGGGTTCTTGGGATCACAGGATCACATT  350

seq1  CAGGTTGTCAGGCTTGCATGATTAGTACTTTTATCCACTTTTGTCATGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTGTCAGGCTTGCATGATTAGTACTTTTATCCACTTTTGTCATGTC  400

seq1  TTTTAAAGTCTTTCTTTCCTCCTCTTCCTTGTCTTTCTCTTCCTCCTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGTCTTTCTTTCCTCCTCTTCCTTGTCTTTCTCTTCCTCCTCCT  450

seq1  CTTCCCTTAAAACAAACACAGTCTTTCACCTCTGAGTTCTTAGAAAACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTTAAAACAAACACAGTCTTTCACCTCTGAGTTCTTAGAAAACTC  500

seq1  TGCAGACTTGATTGAAACATCTGGCTTCTGCTCTTGTGCTTCCCCTGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGACTTGATTGAAACATCTGGCTTCTGCTCTTGTGCTTCCCCTGGCT  550

seq1  GGTTGGCACAGAAAGCGCATGGGCTATTTTTGCCTCTCACCACCTTTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGCACAGAAAGCGCATGGGCTATTTTTGCCTCTCACCACCTTTGGC  600

seq1  ATTACCCATGCATGCCTCTGGCATTACCCATGCATGGTTGTTCTCCTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCCATGCATGCCTCTGGCATTACCCATGCATGGTTGTTCTCCTTGA  650

seq1  AGAGGCACGGCCACGCAGCCATTAGTCTCTCAAGGTCCTAGAATTCTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCACGGCCACGCAGCCATTAGTCTCTCAAGGTCCTAGAATTCTTTC  700

seq1  AGGGAACCGCAGTGGCTGCACTAAAATGGTCTTGACTACATTGTGTAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAACCGCAGTGGCTGCACTAAAATGGTCTTGACTACATTGTGTAGTG  750

seq1  TGATACATAGATGGAGGCCAGGGGAAGTTTACTCAGTCACTTTGTGGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACATAGATGGAGGCCAGGGGAAGTTTACTCAGTCACTTTGTGGGGG  800

seq1  ACTAAGGCTAGAGACTGTTTTTCTCCCATGTTCTTTTTGACGTCATTGGA  850
      |||||||||||||||||||||||| ||||||||||||||| ||| |||||
seq2  ACTAAGGCTAGAGACTGTTTTTCTTCCATGTTCTTTTTGA-GTC-TTGGA  848

seq1  TGAGTAAAGATTAGCATTCTTTTGGACCCTGGAGAATCAGTCCACCAAAT  900
      ||||| ||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGAGT-AAGATTAGCATTCTTTTGGACTCTGGAGAATCAGTCCACCAAAT  897

seq1  TCTTTTGCAATCTCTCCTTTGGGTGGGTGTATAAAAAGGCATTTTCATAG  950
      |||||||||||||||||||||||| ||||| |||||||||||||||||||
seq2  TCTTTTGCAATCTCTCCTTTGGGT-GGTGT-TAAAAAGGCATTTTCATAG  945

seq1  CTTTAGGGAGCAAGACACTAAGAACATGTGGTAGCCAGATTCCCTCTTCC  1000
      ||||| ||||||||||| ||||||||||  ||  ||||||| |||| |||
seq2  CTTTAAGGAGCAAGACATTAAGAACATGGTGTTACCAGATT-CCTC-TCC  993

seq1  TCTGTTGATGGATTCCTTCTC-TGGAAAGGCCAGCTTGCTGCAGGGGCTT  1049
      ||| |  || || |||||||| |||||||| | |||||||||||||||||
seq2  TCT-TGAATTGAATCCTTCTCTTGGAAAGGGCTGCTTGCTGCAGGGGCTT  1042

seq1  CTCATGTAATAATACTATATCTGTTTTGTGTGTCTCTATCTGGATGTACA  1099
      ||||  ||||||  | ||||| |||| |||| ||   ||||||| |||| 
seq2  CTCAATTAATAAATCAATATCGGTTTGGTGTCTC---ATCTGGA-GTACC  1088

seq1  CATGTAAAGTATTTTGAGAAAACAACTAAAGGTCATTGTGGTAATCAACT  1149
      || |||||  ||| |||||||||| |||| |||| ||| || || | |||
seq2  CAGGTAAAAGATTCTGAGAAAACATCTAAGGGTCTTTGGGGGAA-CTACT  1137

seq1  T-TCATTACTATAACAAGATTCCAGGGAAAATCACCTTAAAAGAGAAAAT  1198
      | | ||| ||  ||||| ||||||||  ||| | |||||||||| |||||
seq2  TCTTATT-CTTAAACAAAATTCCAGG--AAAACCCCTTAAAAGAAAAAAT  1184

seq1  GG  1200
      ||
seq2  GG  1186