BAC Information

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BAC

Clone NameB6Ng01-069C01
Chromosome7 (Build37)
Map Location 145,783,300 - 145,924,410
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC435235, Tcerg1l, LOC100043290
Downstream geneMapk1ip1, Ppp2r2d, Bnip3, EG668784, LOC669185, 6330417G02Rik, Dpysl4, Stk32c, LOC100038956, Lrrc27, Pwwp2, Inpp5a, Nkx6-2, E030019B06Rik, 9330101J02Rik, LOC100043472, EG434253
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069C01.bB6Ng01-069C01.g
ACCDH887524DH887525
length1,0791,120
definitionDH887524|Mus musculus domesticus DNA, BAC clone: B6Ng01-069C01, 5' end.DH887525|Mus musculus domesticus DNA, BAC clone: B6Ng01-069C01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(145,923,330 - 145,924,410)(145,783,300 - 145,784,555)
sequence
gaattccaggggaaaaaatgttttggaagagatggagcctgcagcaggca
aatatgtccgtatgagttcctgatatgctgataagcagaacgtcagccac
ctctcgtgaagttcctgtcctacctgcaccgacagctttgctcaggaagg
cactgtgcactgtcagagagcttgcttgactcctcattcttggtacctga
cttacttaggtttctgtggctgtgataaaacaccatggccaaaacagctt
atatttccacatcacagtccatccttagaataagtccgggcaggaacaca
gagcaggaactgaagcagagaccatggaagatcactgcttacttggttgc
tctttgtggtttaatcaacctgctttcttatacaactcaggaccacctgc
ccatgaatagcatggcccacagtgagctgggctctcccataccaatcttt
taattaaaaaaaaaaggtatacagggttaaccaaaggctaatctggtggg
ggcactttctcaagtgtgtttcctcttctcaaatgactcttgcttgtgtc
aatttgacaaaaaactaaccaggacagtccctttcatgcctgtgtgccct
ggagaagatggaagagtggccaacccatgggaataggtgtgtctgctcat
agccctcttctacagaagagtaaactcagagagcttcctcagtactagca
aaggtctgcctaccactccattctgagctgtctttccatgctgtgatggc
agaggctgtgaactgggctgtaccatcaaaatagagctgggctgggctgg
ctttctggtgtccctggctactcttcacattattatcacctcccctctct
ctactccatcatgctttgtggaggtgggatgctccacttctgctccgggt
ggcccacttccacttagctctccgatggaagcttggtttcagttggagag
catgtcccagacactttgaggtactgcagagtgtctatgggtgctatagc
caccctgagtggtctgatattcctgctccagcagctcagaagccaagcca
atggatggtcctcctgcccctgaagaaaa
gaattctttgttcagttctgagccccatttttaatggggttatttgattt
tctgaagtccaccttcttgagttctttatatgtgttggatattagtcccc
tatctgatttaggataagtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacggtgtcttttgccttgcagaagctttggagtttcat
gaggtcccatttgtcaattctcgatcttacagcacaagccattgctgttc
tattcaggaatttttcccctgtgcccatatcttcaaggctttcccccact
ttctcctctataagtttcagtgtctctggttacttttaatgtgaaaccca
gtgtgcctagtgtgtgtttaacttgaactgattccaaattagcaatgcct
aatgctacttgatataaatctgtattcatttgctttttgctattcttact
ttctgaaatttacccagcactccaacagcattccacctgaatcctactcc
aaagcaaagaaggaggctgcactggttgccatttccaaggagttgctgct
gctcaagaaagagacagagcaaagtgaatgaacagggctaaacgaaggcc
aaggaaaaggataaatgatgatctacaaccaggcctactgcctcgctatt
gcctggaacaaatgcagcgctaagagcttccactgcatggctggggcagg
gatcacacggaacacaactggatccaggcagacttgaatgagaagtttgt
actcaaggacaaagtctaagtctccttcttagagacagacatgtgcaacc
aaagcaaacagcaagaccagtaaatgcctcaccactgggtcttgccgtga
tgagaagaaaactctgtcagttaatgtcataaggagggctcatagcctca
gtcataggccatcccttagctctgaagatgtgagcttcttggaccggaag
atagtggatttcagaagctctggagaagggaggaggagaggaaaaacaaa
tggctgtcatctctgaggcaagcagggaactagaacagccaagagagcca
tgaatagctgaagcctgaagaaattcgatagatgcctggcgtcaagtaaa
agagcgcttcaccatgaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_145923330_145924410
seq2: B6Ng01-069C01.b_47_1125 (reverse)

seq1  TTTTCTTCAGGGGCA-GATGACCATCCATTTGCTCTGCTTCCTGAGCCTG  49
      ||||||||||||||| || ||||||||||| |||  |||| ||||| |||
seq2  TTTTCTTCAGGGGCAGGAGGACCATCCATTGGCTTGGCTT-CTGAG-CTG  48

seq1  CTGGAGCAGGAATATCAGACCACTCAGGGTGGCTATAGCACCCATAGACA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCAGGAATATCAGACCACTCAGGGTGGCTATAGCACCCATAGACA  98

seq1  CTCTGCAGTACCTCAAAGTGTCTGGGACATGCTCTCCAACTGAAACCAAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCAGTACCTCAAAGTGTCTGGGACATGCTCTCCAACTGAAACCAAG  148

seq1  CTTCCAATCGGAGAGCTAAGTGGAAGTGGGCCACCCGGAGCAGAAGTGGA  199
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCC-ATCGGAGAGCTAAGTGGAAGTGGGCCACCCGGAGCAGAAGTGGA  197

seq1  GCATCCCACCTCCACAAAGCATGATGGAGTAGAGAGAGGGGAGGTGATAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCCACCTCCACAAAGCATGATGGAGTAGAGAGAGGGGAGGTGATAA  247

seq1  TAATGTGAAGAGTAGCCAGGGACACCAGAAAGCCAGCCCAGCCCAGCTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGAAGAGTAGCCAGGGACACCAGAAAGCCAGCCCAGCCCAGCTCT  297

seq1  ATTTTGATGGTACAGCCCAGTTCACAGCCTCTGCCATCACAGCATGGAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGATGGTACAGCCCAGTTCACAGCCTCTGCCATCACAGCATGGAAA  347

seq1  GACAGCTCAGAATGGAGTGGTAGGCAGACCTTTGCTAGTACTGAGGAAGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTCAGAATGGAGTGGTAGGCAGACCTTTGCTAGTACTGAGGAAGC  397

seq1  TCTCTGAGTTTACTCTTCTGTAGAAGAGGGCTATGAGCAGACACACCTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAGTTTACTCTTCTGTAGAAGAGGGCTATGAGCAGACACACCTAT  447

seq1  TCCCATGGGTTGGCCACTCTTCCATCTTCTCCAGGGCACACAGGCATGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGGGTTGGCCACTCTTCCATCTTCTCCAGGGCACACAGGCATGAA  497

seq1  AGGGACTGTCCTGGTTAGTTTTTTGTCAAATTGACACAAGCAAGAGTCAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTGTCCTGGTTAGTTTTTTGTCAAATTGACACAAGCAAGAGTCAT  547

seq1  TTGAGAAGAGGAAACACACTTGAGAAAGTGCCCCCACCAGATTAGCCTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAGAGGAAACACACTTGAGAAAGTGCCCCCACCAGATTAGCCTTT  597

seq1  GGTTAACCCTGTATACCTTTTTTTTTTAATTAAAAGATTGGTATGGGAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAACCCTGTATACCTTTTTTTTTTAATTAAAAGATTGGTATGGGAGA  647

seq1  GCCCAGCTCACTGTGGGCCATGCTATTCATGGGCAGGTGGTCCTGAGTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGCTCACTGTGGGCCATGCTATTCATGGGCAGGTGGTCCTGAGTTG  697

seq1  TATAAGAAAGCAGGTTGATTAAACCACAAAGAGCAACCAAGTAAGCAGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGAAAGCAGGTTGATTAAACCACAAAGAGCAACCAAGTAAGCAGTG  747

seq1  ATCTTCCATGGTCTCTGCTTCAGTTCCTGCTCTGTGTTCCTGCCCGGACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCATGGTCTCTGCTTCAGTTCCTGCTCTGTGTTCCTGCCCGGACT  797

seq1  TATTCTAAGGATGGACTGTGATGTGGAAATATAAGCTGTTTTGGCCATGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTAAGGATGGACTGTGATGTGGAAATATAAGCTGTTTTGGCCATGG  847

seq1  TGTTTTATCACAGCCACAGAAACCTAAGTAAGTCAGGTACCAAGAATGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATCACAGCCACAGAAACCTAAGTAAGTCAGGTACCAAGAATGAG  897

seq1  GAGTCAAGCAAGCTCTCTGACAGTGCACAGTGCCTTCCTGAGCAAAGCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAAGCAAGCTCTCTGACAGTGCACAGTGCCTTCCTGAGCAAAGCTG  947

seq1  TCGGTGCAGGTAGGACAGGAACTTCACGAGAGGTGGCTGACGTTCTGCTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTGCAGGTAGGACAGGAACTTCACGAGAGGTGGCTGACGTTCTGCTT  997

seq1  ATCAGCATATCAGGAACTCATACGGACATATTTGCCTGCTGCAGGCTCCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCATATCAGGAACTCATACGGACATATTTGCCTGCTGCAGGCTCCA  1047

seq1  TCTCTTCCAAAACATTTTTTCCCCTGGAATTC  1081
      ||||||||||||||||||||||||||||||||
seq2  TCTCTTCCAAAACATTTTTTCCCCTGGAATTC  1079

seq1: chr7_145783300_145784555
seq2: B6Ng01-069C01.g_67_1186

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTAATGGGGTTATTTGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTAATGGGGTTATTTGATTT  50

seq1  TCTGAAGTCCACCTTCTTGAGTTCTTTATATGTGTTGGATATTAGTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGTCCACCTTCTTGAGTTCTTTATATGTGTTGGATATTAGTCCCC  100

seq1  TATCTGATTTAGGATAAGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGATTTAGGATAAGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTT  150

seq1  TTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGGAGTTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGGAGTTTCAT  200

seq1  GAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTC  250

seq1  TATTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTCCCCCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTCCCCCACT  300

seq1  TTCTCCTCTATAAGTTTCAGTGTCTCTGGTTACTTTTAATGTGAAACCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTCTATAAGTTTCAGTGTCTCTGGTTACTTTTAATGTGAAACCCA  350

seq1  GTGTGCCTAGTGTGTGTTTAACTTGAACTGATTCCAAATTAGCAATGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCTAGTGTGTGTTTAACTTGAACTGATTCCAAATTAGCAATGCCT  400

seq1  AATGCTACTTGATATAAATCTGTATTCATTTGCTTTTTGCTATTCTTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTACTTGATATAAATCTGTATTCATTTGCTTTTTGCTATTCTTACT  450

seq1  TTCTGAAATTTACCCAGCACTCCAACAGCATTCCACCTGAATCCTACTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAATTTACCCAGCACTCCAACAGCATTCCACCTGAATCCTACTCC  500

seq1  AAAGCAAAGAAGGAGGCTGCACTGGTTGCCATTTCCAAGGAGTTGCTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAAGAAGGAGGCTGCACTGGTTGCCATTTCCAAGGAGTTGCTGCT  550

seq1  GCTCAAGAAAGAGACAGAGCAAAGTGAATGAACAGGGCTAAACGAAGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAGAAAGAGACAGAGCAAAGTGAATGAACAGGGCTAAACGAAGGCC  600

seq1  AAGGAAAAGGATAAATGATGATCTACAACCAGGCCTACTGCCTCGCTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAAGGATAAATGATGATCTACAACCAGGCCTACTGCCTCGCTATT  650

seq1  GCCTGGAACAAATGCAGCGCTAAGAGCTTCCACTGCATGGCTGGGGCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGAACAAATGCAGCGCTAAGAGCTTCCACTGCATGGCTGGGGCAGG  700

seq1  GATCACACGGAACACAACTGGATCCAGGCAGACTTGAATGAGAAGTTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACACGGAACACAACTGGATCCAGGCAGACTTGAATGAGAAGTTTGT  750

seq1  ACTCAAGGACAAAGTCTAAGTCTCCTTCTTAGAGACAGACATGTGCAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGGACAAAGTCTAAGTCTCCTTCTTAGAGACAGACATGTGCAACC  800

seq1  AAAGCAAACAGCAAGACCAGTAAATGCCTCACCACT-GGTCTTGCCGTGA  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAAGCAAACAGCAAGACCAGTAAATGCCTCACCACTGGGTCTTGCCGTGA  850

seq1  TGAGAAGAAAACTCTGTCAGTTAATGTCATAAGGAGGGCTCATAGCCTCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGAAAACTCTGTCAGTTAATGTCATAAGGAGGGCTCATAGCCTCA  900

seq1  GTCATAGGCCATCCCTTAGCTCTGAAGATGTGAGCTTCTTGGACCGGAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAGGCCATCCCTTAGCTCTGAAGATGTGAGCTTCTTGGACCGGAAG  950

seq1  ATAGTGGATTTCAGAAGCTTCTTGGAGAAGGGAGGAGGAGAGGGAGAAAA  999
      |||||||||||||||||||   |||||||||||||||||||||   ||||
seq2  ATAGTGGATTTCAGAAGCT--CTGGAGAAGGGAGGAGGAGAGG--AAAAA  996

seq1  CAAATTGATTTGTCATCTCTGAGGCAAGCAAGGGGAACTAGAGACAGCCA  1049
      ||||| |   ||||||||||||||||||||  |||||||||| |||||| 
seq2  CAAATGG--CTGTCATCTCTGAGGCAAGCA--GGGAACTAGA-ACAGCC-  1040

seq1  AAGAGAAGCCATGAAATAAGGCTAGAAG-CTGAAGAATATTCAGATAAGA  1098
      ||||| ||||||| ||||  ||| |||| |||||||| |||| ||| |||
seq2  AAGAG-AGCCATG-AATA--GCT-GAAGCCTGAAGAA-ATTC-GAT-AGA  1082

seq1  TGCCTTTGGCGTCAGAGTGTAAAAAGGAGCGCTTTCACCCAGTGACTTGA  1148
      ||||  |||||||| |||    ||| |||||| ||||||   ||| ||  
seq2  TGCC--TGGCGTCA-AGT----AAAAGAGCGC-TTCACC--ATGAATT--  1120

seq1  GCGTTCAAACCCTCTGCTCACCGATTCTACCTTTGCAGACAAGGGCTGCT  1198
                                                        
seq2  --------------------------------------------------  1120

seq1  GCTGCTGCCAGCAAACCCCGGCTCGCCCACCTTCTGTGAGCAGAAGTTTC  1248
                                                        
seq2  --------------------------------------------------  1120

seq1  CATGAATT  1256
              
seq2  --------  1120