BAC Information

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BAC

Clone NameB6Ng01-069E16
Chromosome7 (Build37)
Map Location 14,654,983 - 14,656,132
singlet/doubletsinglet
Overlap geneEG629203
Upstream geneV1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256, LOC666267, LOC100042624, LOC100043194, Sult2a1, EG620627, EG434121
Downstream geneLOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352, EG666312, LOC666365, LOC671978, LOC100042677, LOC100042685, EG666381
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069E16.bB6Ng01-069E16.g
ACCDH887644DH887645
length1,2281,123
definitionDH887644|Mus musculus domesticus DNA, BAC clone: B6Ng01-069E16, 5' end.DH887645|Mus musculus domesticus DNA, BAC clone: B6Ng01-069E16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatacaaactggttgagaagcacatgaaaaatat
tcagcatccttaataataagggaaatacaagtcaaaacaaccctaagatt
ccacctacaccagtcagaatggctatgatcaaaactcatgttatagcaga
tgctggagaggatgttgagaaagaggaacactcctccattgctggtggga
ttacaagctggtgtaactgctctggaaatcagtttgtcggttcctcagaa
aattagacttattattacccgaagatcctgcagtaccactcctgagcata
tatcaagaagatgctccaacatatagtaaggacacatgctccactatatt
catagtagccttatttataatagccagaagctgaaaagaacctagatgtc
cctcaaaagaggaatggatacagaaaatgcggtatagtcacagaatggag
ttctatgcagctattaaaaacaatgacttcatgaaattcctagacaaatg
gatagatctgtaggatatcatcttgaggtaacccaatcacaaaagaacac
acatgatatgctctcagtgataagtggatattagcccagagtctcagaat
ccttttttgaagggggaaccaaatacccatggaaagagttacagagacaa
agttcagattagagtctgaaagaatgagcatcctgagactgcccaactca
gggatccatcccataaacaaccaccaaacccagacatgaggcagatacca
acaagagctggctgacaggagcatgatatagctctctcctgtgaggctct
gccagagcctggcaaatacagcagtggatgctcagaaccatcccttggat
ggagcacaaatctgcagtgaagagctagagaaagtactcaagaatttaag
agtctgagcccatagaagcacatcaatatgaactaacagtaccccagagc
tcttggaataaccccaagcagcaaacacatgtgacttgtgctctagatga
ttgtagcacatgatgctagcagtcatcatgaaagaaagctgtctggagtc
tttgcctagtaattgattcagacagatgagattggaggatgtggcagcag
gtaaggtcgaattcaaggaacatgaggatactgattaatgtaaggaaaca
tcgttaatacataagtccgtattctagtctaagacaatagagcttaagtt
gttgcagattaaacactacttgcatctg
gaattcatactagagagatattcagctattgtttggttgacaagactttg
taaagacaatgccacaatcaagacgtgtataggaaatatattctggcagc
cctcaaaatttccagcactcattacttcacagtatatgtttaatggacat
aatagttgggccattaatcattttccctagttccttcagaagtcattaat
tagagttaaaaggggaagatgacccaaggacagaggaagaagcctgccat
cttcaggccaaaaagaaaatcctacaaaagtatggacaatactctgatgt
gagatctacagcctccagaactatgaggaagttctttttcaacaagagtt
aagccaccacatgttagggttatcctgcattctgatacagaaaagtttgg
ggagatttttagaaacaaggaatgaaaataaaagtacatcaatacggttc
atcgaatttgcacataggtgaacttacaactccatgtgtgtagctccaaa
gatgtgatttctcaaatggactgatttattccattggcaatccatattga
atttgttgagatgcttttagtctagcatctatctggtttggcttatcagg
atccaggcatgctggaagaaataataagaaaatgtgttctaacaaagaaa
aaaaaaaaaaagaacctgaaagtaccaatggatatgaataggtacacatc
tcattagatgacacttttatattcatatcaattatagtatattattttaa
tattctttatcagggatttacatttttatgaattctttatattttcttta
tatagccctctggggaattaaaattaacttatgtgatgatacagaaagga
tgtaattgttataagagaaaagatggcttctattgtcattctttttggat
tcaaatacacatccatcactgtcatactgataacatctcaagactaattt
tcctcatcagcaaataggagactgcctataccttcctcagtatcaaaatt
tatttaacatcccacactgagttaatcttatatgttgtcactctgaaatg
aaccattagtatttcagaacctttcttcaatatagagtgcaattctggtg
tatcagctaagtacatggtacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_14654983_14656132
seq2: B6Ng01-069E16.g_68_1190 (reverse)

seq1  TTGTACCATGTACTTATGCTTTGAATATACACACAGAATATGCATCTAAT  50
      |||||||||||||||| |||      |||||| |||||| |||| ||  |
seq2  TTGTACCATGTACTTA-GCT-----GATACAC-CAGAAT-TGCA-CT-CT  40

seq1  ATATTTGGAAAGAAAGTGTTTCTGAAATTACTAAATGGTTCATTATACAG  100
      |||||    ||||||  | |||||||| |||| ||||||||||  | |||
seq2  ATATT---GAAGAAA--GGTTCTGAAA-TACT-AATGGTTCAT--TTCAG  81

seq1  AGTGACAGACATATAGGATATACTCAGTGTGGGATTGTTAAATAAATTTG  150
      ||||||| ||||||| |||  ||||||||||||| |||||||||||||| 
seq2  AGTGACA-ACATATAAGATTAACTCAGTGTGGGA-TGTTAAATAAATTT-  128

seq1  TGAATACCTGAGGAAGGTATAGGCAGTTCTCCTATTTTGCTGATGAGGAA  200
      || ||| ||||||||||||||||||| ||||||| ||||||||||||| |
seq2  TG-ATA-CTGAGGAAGGTATAGGCAG-TCTCCTA-TTTGCTGATGAGG-A  173

seq1  AAATTAGTCTTTGAGATGTTATCAGTATGACAGTGATGGATGTGTATTTG  250
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGTC-TTGAGATGTTATCAGTATGACAGTGATGGATGTGTATTTG  222

seq1  AATCCAAAAAGAATGACAATAGAAGCCATTCTTTTCTC-TATAAC-ATTA  298
      |||||||||||||||||||||||||||| ||||||||| |||||| ||||
seq2  AATCCAAAAAGAATGACAATAGAAGCCA-TCTTTTCTCTTATAACAATTA  271

seq1  CATTCTTTCTGTATCATCACATAAGTTAATTTTAATTCCCCAGAGGGCTA  348
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTTCTGTATCATCACATAAGTTAATTTTAATTCCCCAGAGGGCTA  321

seq1  TATTAAAGAAAATATAAAGAATTCATAAAAATGTAAATCCCTGATAAAGA  398
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TA-TAAAGAAAATATAAAGAATTCATAAAAATGTAAATCCCTGATAAAGA  370

seq1  ATATTAAAATAATATACTATAATTGATATGAATATAAAAGTGTCATCTAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAAATAATATACTATAATTGATATGAATATAAAAGTGTCATCTAA  420

seq1  TGAGATGTGTACCTATTCATATCCATTGGTACTTTCAGGTTC-TTTTTTT  497
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGAGATGTGTACCTATTCATATCCATTGGTACTTTCAGGTTCTTTTTTTT  470

seq1  TTTTTTCTTTGTTAGAACACATTTTCTTATTATTTCTTCCAGCATGCCTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTGTTAGAACACATTTTCTTATTATTTCTTCCAGCATGCCTG  520

seq1  GATCCTGATAAGCCAAACCAGATAGATGCTAGACTAAAAGCATCTCAACA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTGATAAGCCAAACCAGATAGATGCTAGACTAAAAGCATCTCAACA  570

seq1  AATTCAATATGGATTGCCAATGGAATAAATCAGTCCATTTGAGAAATCAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAATATGGATTGCCAATGGAATAAATCAGTCCATTTGAGAAATCAC  620

seq1  ATCTTTGGAGCTACACACATGGAGTTGTAAGTTCACCTATGTGCAAATTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGGAGCTACACACATGGAGTTGTAAGTTCACCTATGTGCAAATTC  670

seq1  GATGAACCGTATTGATGTACTTTTATTTTCATTCCTTGTTTCTAAAAATC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAACCGTATTGATGTACTTTTATTTTCATTCCTTGTTTCTAAAAATC  720

seq1  TCCCCAAACTTTTCTGTATCAGAATGCAGGATAACCCTAACATGTGGTGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAAACTTTTCTGTATCAGAATGCAGGATAACCCTAACATGTGGTGG  770

seq1  CTTAACTCTTGTTGAAAAAGAACTTCCTCATAGTTCTGGAGGCTGTAGAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACTCTTGTTGAAAAAGAACTTCCTCATAGTTCTGGAGGCTGTAGAT  820

seq1  CTCACATCAGAGTATTGTCCATACTTTTGTAGGATTTTCTTTTTGGCCTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACATCAGAGTATTGTCCATACTTTTGTAGGATTTTCTTTTTGGCCTG  870

seq1  AAGATGGCAGGCTTCTTCCTCTGTCCTTGGGTCATCTTCCCCTTTTAACT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGCAGGCTTCTTCCTCTGTCCTTGGGTCATCTTCCCCTTTTAACT  920

seq1  CTAATTAATGACTTCTGAAGGAACTAGGGAAAATGATTAATGGCCCAACT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTAATGACTTCTGAAGGAACTAGGGAAAATGATTAATGGCCCAACT  970

seq1  ATTATGTCCATTAAACATATACTGTGAAGTAATGAGTGCTGGAAATTTTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTCCATTAAACATATACTGTGAAGTAATGAGTGCTGGAAATTTTG  1020

seq1  AGGGCTGCCAGAATATATTTCCTATACACGTCTTGATTGTGGCATTGTCT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGCCAGAATATATTTCCTATACACGTCTTGATTGTGGCATTGTCT  1070

seq1  TTACAAAGTCTTGTCAACCAAACAATAGCTGAATATCTCTCTAGTATGAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAGTCTTGTCAACCAAACAATAGCTGAATATCTCTCTAGTATGAA  1120

seq1  TTC  1150
      |||
seq2  TTC  1123