BAC Information

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BAC

Clone NameB6Ng01-069J16
Chromosome7 (Build37)
Map Location 119,718,845 - 119,828,518
singlet/doubletdoublet
Overlap geneParva, LOC627808, Tead1
Upstream geneGalntl4, LOC668399, LOC100042678, Usp47, Dkk3, Mical2, Micalcl
Downstream gene4632411J06Rik, LOC434227, Arntl, A630005I04Rik, Btbd10, Pth, LOC100042736, Mlstd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069J16.bB6Ng01-069J16.g
ACCDH887863DH887864
length1,1101,098
definitionDH887863|Mus musculus domesticus DNA, BAC clone: B6Ng01-069J16, 5' end.DH887864|Mus musculus domesticus DNA, BAC clone: B6Ng01-069J16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,718,845 - 119,719,971)(119,827,410 - 119,828,518)
sequence
gaattctttcttcttttcttccagggccctttccggaaggcatggtgagt
gtcatgagcttgtctagcttctgtggtctcggtgaagctacttgtttctg
ttgtctaatgtgtctctgtcccagcttgggacacactggctaggtgggga
gggacagcttagtgacatgaagaacactcactcatcagcacaggtctggc
cccagtagggcagacttaccctgtgcctggtagtttaggaagagatattt
gaacacactccctcttagttcctattatggaacccatctcccagaactta
cacatgctcatgcatagacagacagacagacagacagacagacagacaga
cagacacacacacacacacacacacacacacaccttcctagcagtcttag
ctttgcccattagtgcccaaatggaaaagtctggctttgggttacagtcc
ttccccaagcctgcttgcttctggaactgccctcgtgcccttccactagg
tcacctctggttctaggaatctccctgcccagagcatggcttggctctgt
tctgtcagcctcattctgcttacctcatgaaatagttctactctactaaa
aactgcactgggaggacaatgttgtaatctatggaacacacgttttcata
cctactatgcacctgaggaaagcttatctttcagatgatgttttgtagaa
agggaaactgaggcacagggaggttgacagacttaggagccccccagaga
gagcctcttattctgtcctggaagcactggactgtctccttacttctgcc
cctacgggcgtaattgtttcgaaaattagcccaaacagtttggtacttgg
atgactcatgactagagatgtcagaaacactttagaattgtgcctgcatt
gggatatgaaggatgggcgtgaggagaaagaccaagccagggtcattctg
cttagaaacatgtcgcctgacagacacacagacaaggtcctgtaagaact
ggccagcgatcccatgtacagctacgtgcttcactgcatggtggtgtttc
atttcgaacgtgatgccttgaaacccgttgaccatgcactaaccaactca
atgtggtgaa
gaattcagttcttcggagccagagcaaatgaagtcatttggtttctgtgg
gttctctatgcacttcggcagtaggaaaccggccatccaagttggccttt
cctcattaactccgttttccttgaaaaagacagtaaagtcatagcaaaat
tctaggatatggggcactgaaatggatgctgtcaaagccatcaggaagtc
atggtgtgaagacaaacaggtatcgccttccaaaggcttgggttggcatg
acagaccgacccggactttggtcaaattatgtatcttctcagagggtttc
ctgtctttgcagatgatcataaaatattcatttatctagttgactaccta
ttaggggaaaaaagacactggttcccaataagaactctgcagctacagtg
tcaggtgacattaaagctgccctaagatgcaggagctcaaggtggttcaa
agcaaaaatgcaggcagaaggctctccctcaatcctcacagcagagcttc
ggcagaaagatactggtttcatctgtgacaccagccccatacctaagtgg
acaacattcttggatgaacttctcaaattttcttaaacagtctcagattt
aaaatctcctttcaagttaaattgagattgcacttgaactctatccaaga
gcaaagctgaactgaattatgataattagaaagctgtgtctataattttt
ttaagaagtcagtagagttgatatattttttttaaaagttcatgccagag
aatataagttcagtgtgttcccacataactaacatttctcaccatggtga
gcagtttttcagtttacccatcagtactgctgggtagtcccaggtctcag
tacagacaaacgtgtcagatgccgagaagctcccagaacttccccctgca
gaggtggaccctcaacttcttcatcagtaaatagtccacttttaagtcta
agctcatttcccacgctctatctttcaccattaaaaaatgttatacgggg
ttgacatggggctcagttgttacagggttgtgacaagcgctatcatggag
acagagtgtgatctctagaggtataaataaaccagcatgggtaccagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_119718845_119719971
seq2: B6Ng01-069J16.b_48_1157

seq1  GAATTCTTTCTTCTTTTCTTCCAGGGCCCTTTCCGGAAGGCATGGTGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTCTTTTCTTCCAGGGCCCTTTCCGGAAGGCATGGTGAGT  50

seq1  GTCATGAGCTTGTCTAGCTTCTGTGGTCTCGGTGAAGCTACTTGTTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGAGCTTGTCTAGCTTCTGTGGTCTCGGTGAAGCTACTTGTTTCTG  100

seq1  TTGTCTAATGTGTCTCTGTCCCAGCTTGGGACACACTGGCTAGGTGGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTAATGTGTCTCTGTCCCAGCTTGGGACACACTGGCTAGGTGGGGA  150

seq1  GGGACAGCTTAGTGACATGAAGAACACTCACTCATCAGCACAGGTCTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAGCTTAGTGACATGAAGAACACTCACTCATCAGCACAGGTCTGGC  200

seq1  CCCAGTAGGGCAGACTTACCCTGTGCCTGGTAGTTTAGGAAGAGATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTAGGGCAGACTTACCCTGTGCCTGGTAGTTTAGGAAGAGATATTT  250

seq1  GAACACACTCCCTCTTAGTTCCTATTATGGAACCCATCTCCCAGAACTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACACTCCCTCTTAGTTCCTATTATGGAACCCATCTCCCAGAACTTA  300

seq1  CACATGCTCATGCATAGACAGACAGACAGACAGACAGACAGACAGACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCTCATGCATAGACAGACAGACAGACAGACAGACAGACAGACAGA  350

seq1  CAGACACACACACACACACACACACACACACACCTTCCTAGCAGTCTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACACACACACACACACACACACACACACCTTCCTAGCAGTCTTAG  400

seq1  CTTTGCCCATTAGTGCCCAAATGGAAAAGTCTGGCTTTGGGTTACAGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCCATTAGTGCCCAAATGGAAAAGTCTGGCTTTGGGTTACAGTCC  450

seq1  TTCCCCAAGCCTGCTTGCTTCTGGAACTGCCCTCGTGCCCTTCCACTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAAGCCTGCTTGCTTCTGGAACTGCCCTCGTGCCCTTCCACTAGG  500

seq1  TCACCTCTGGTTCTAGGAATCTCCCTGCCCAGAGCATGGCTTGGCTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTCTGGTTCTAGGAATCTCCCTGCCCAGAGCATGGCTTGGCTCTGT  550

seq1  TCTGTCAGCCTCATTCTGCTTACCTCATGAAATAGTTCTACTCTACTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAGCCTCATTCTGCTTACCTCATGAAATAGTTCTACTCTACTAAA  600

seq1  AACTGCACTGGGAGGACAATGTTGTAATCTATGGAACACACGTTTTCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCACTGGGAGGACAATGTTGTAATCTATGGAACACACGTTTTCATA  650

seq1  CCTACTATGCACCTGAGGAAAGCTTATCTTTCAGATGATGTTTTGTAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTATGCACCTGAGGAAAGCTTATCTTTCAGATGATGTTTTGTAGAA  700

seq1  AGGGAAACTGAGGCACAGGGAGGTTGACAGACTTAGGAGCCCCCCAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAACTGAGGCACAGGGAGGTTGACAGACTTAGGAGCCCCCCAGAGA  750

seq1  GAGCCTCTTATTCTGTCCTGGAAGGCACTGGACTGTCTCCTTACTTCTGC  800
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GAGCCTCTTATTCTGTCCTGGAA-GCACTGGACTGTCTCCTTACTTCTGC  799

seq1  CCCTACGGGCGTAATTGTTTCGAAAATTAGCCCAAACAGTTTGGTACTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACGGGCGTAATTGTTTCGAAAATTAGCCCAAACAGTTTGGTACTTG  849

seq1  GATGACTCATGACTAGAGATGTCAGAAACACTTTAGAATTGTGCCTGCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACTCATGACTAGAGATGTCAGAAACACTTTAGAATTGTGCCTGCAT  899

seq1  TGGGATATGGAGGGATGGGCGTGAGGAGAAAAGACCAAGCCAGGGTCATT  950
      |||||||| || |||||||||||||||| |||||||||||||||||||||
seq2  TGGGATAT-GAAGGATGGGCGTGAGGAG-AAAGACCAAGCCAGGGTCATT  947

seq1  CTGCTTAGAAACATGTCGCCTGACAGACACACAGACAAGGGCCCTGGTAA  1000
      |||||||||||||||||||||||||||||||||||||||| ||   ||||
seq2  CTGCTTAGAAACATGTCGCCTGACAGACACACAGACAAGGTCC--TGTAA  995

seq1  GAACTGGCCAGCGATTCCCCATGGTAACCAGCTACGTGCTTCACTGCATG  1050
      |||||||||||||||  ||||| |||  ||||||||||||||||||||||
seq2  GAACTGGCCAGCGAT--CCCAT-GTA--CAGCTACGTGCTTCACTGCATG  1040

seq1  GTGTGTGTTTCCATTTCAGAACGTGATGCCTTTGACACGCTGTTTGACCA  1100
      ||| |||||| |||||| |||||||||||| |||| || |   |||||||
seq2  GTG-GTGTTT-CATTTC-GAACGTGATGCC-TTGAAACCC--GTTGACCA  1084

seq1  TGCACCAGACAAACTCAATGTGGTGAA  1127
      ||||| | || ||||||||||||||||
seq2  TGCACTA-ACCAACTCAATGTGGTGAA  1110

seq1: chr7_119827410_119828518
seq2: B6Ng01-069J16.g_67_1164 (reverse)

seq1  CCTGTTACCCATGCTGGGTTTATATTATACCCTTCCTTGGGATCACACTC  50
      |||| |||||||||| ||||||| |||||||    || | ||||||||||
seq2  CCTGGTACCCATGCT-GGTTTAT-TTATACC---TCTAGAGATCACACTC  45

seq1  TGGTCT-CATGATAGCGCCTGTCACAACCCCTGTAACAACTGAGCCACAT  99
      | |||| ||||||||||| |||||||| |||||||||||||||||| |||
seq2  T-GTCTCCATGATAGCGCTTGTCACAA-CCCTGTAACAACTGAGCCCCAT  93

seq1  GTCAACCCCGTATTAACATTTTTTTAATGGTGAAAGATAGAGCGTTGGGA  149
      |||||||||||| ||||| ||||||||||||||||||||||||| |||||
seq2  GTCAACCCCGTA-TAACA-TTTTTTAATGGTGAAAGATAGAGCG-TGGGA  140

seq1  AATGAGCTTAAGACTTAAAAGTGGACTAATTTACTGATGAAGAAGTTGAG  199
      ||||||||| ||||||||||||||||| ||||||||||||||||||||||
seq2  AATGAGCTT-AGACTTAAAAGTGGACT-ATTTACTGATGAAGAAGTTGAG  188

seq1  GGTCCACCTCTGCAGGGGGAAGTTCTGGGAGCTTCTCGGCATCTGACACG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCACCTCTGCAGGGGGAAGTTCTGGGAGCTTCTCGGCATCTGACACG  238

seq1  TTTGTCTGTACTGAGACCTGGGACTACCCAGCAGTACTGATGGGTAAACT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGTACTGAGACCTGGGACTACCCAGCAGTACTGATGGGTAAACT  288

seq1  GAAAAACTGCTCACCATGGTGAGAAATGTTAGTTATGTGGGAACACACTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACTGCTCACCATGGTGAGAAATGTTAGTTATGTGGGAACACACTG  338

seq1  AACTTATATTCTCTGGCATGAACTTTTAAAAAAAATATATCAACTCTACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTATATTCTCTGGCATGAACTTTTAAAAAAAATATATCAACTCTACT  388

seq1  GACTTCTTAAAAAAATTATAGACACAGCTTTCTAATTATCATAATTCAGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTTAAAAAAATTATAGACACAGCTTTCTAATTATCATAATTCAGT  438

seq1  TCAGCTTTGCTCTTGGATAGAGTTCAAGTGCAATCTCAATTTAACTTGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTTGCTCTTGGATAGAGTTCAAGTGCAATCTCAATTTAACTTGAA  488

seq1  AGGAGATTTTAAATCTGAGACTGTTTAAGAAAATTTGAGAAGTTCATCCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATTTTAAATCTGAGACTGTTTAAGAAAATTTGAGAAGTTCATCCA  538

seq1  AGAATGTTGTCCACTTAGGTATGGGGCTGGTGTCACAGATGAAACCAGTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTTGTCCACTTAGGTATGGGGCTGGTGTCACAGATGAAACCAGTA  588

seq1  TCTTTCTGCCGAAGCTCTGCTGTGAGGATTGAGGGAGAGCCTTCTGCCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGCCGAAGCTCTGCTGTGAGGATTGAGGGAGAGCCTTCTGCCTG  638

seq1  CATTTTTGCTTTGAACCACCTTGAGCTCCTGCATCTTAGGGCAGCTTTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTGCTTTGAACCACCTTGAGCTCCTGCATCTTAGGGCAGCTTTAA  688

seq1  TGTCACCTGACACTGTAGCTGCAGAGTTCTTATTGGGAACCAGTGTCTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACCTGACACTGTAGCTGCAGAGTTCTTATTGGGAACCAGTGTCTTT  738

seq1  TTTCCCCTAATAGGTAGTCAACTAGATAAATGAATATTTTATGATCATCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTAATAGGTAGTCAACTAGATAAATGAATATTTTATGATCATCT  788

seq1  GCAAAGACAGGAAACCCTCTGAGAAGATACATAATTTGACCAAAGTCCGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGACAGGAAACCCTCTGAGAAGATACATAATTTGACCAAAGTCCGG  838

seq1  GTCGGTCTGTCATGCCAACCCAAGCCTTTGGAAGGCGATACCTGTTTGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGGTCTGTCATGCCAACCCAAGCCTTTGGAAGGCGATACCTGTTTGTC  888

seq1  TTCACACCATGACTTCCTGATGGCTTTGACAGCATCCATTTCAGTGCCCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACCATGACTTCCTGATGGCTTTGACAGCATCCATTTCAGTGCCCC  938

seq1  ATATCCTAGAATTTTGCTATGACTTTACTGTCTTTTTCAAGGAAAACGGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTAGAATTTTGCTATGACTTTACTGTCTTTTTCAAGGAAAACGGA  988

seq1  GTTAATGAGGAAAGGCCAACTTGGATGGCCGGTTTCCTACTGCCGAAGTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATGAGGAAAGGCCAACTTGGATGGCCGGTTTCCTACTGCCGAAGTG  1038

seq1  CATAGAGAACCCACAGAAACCAAATGACTTCATTTGCTCTGGCTCCGAAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGAACCCACAGAAACCAAATGACTTCATTTGCTCTGGCTCCGAAG  1088

seq1  AACTGAATTC  1109
      ||||||||||
seq2  AACTGAATTC  1098