BAC Information

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BAC

Clone NameB6Ng01-069L19
Chromosome7 (Build37)
Map Location 120,135,666 - 120,295,483
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042678, Usp47, Dkk3, Mical2, Micalcl, Parva, LOC627808, Tead1, 4632411J06Rik, LOC434227
Downstream geneArntl, A630005I04Rik, Btbd10, Pth, LOC100042736, Mlstd2, EG434228, Spon1, Rras2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069L19.bB6Ng01-069L19.g
ACCDH887953DH887954
length1,0321,028
definitionDH887953|Mus musculus domesticus DNA, BAC clone: B6Ng01-069L19, 5' end.DH887954|Mus musculus domesticus DNA, BAC clone: B6Ng01-069L19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,135,666 - 120,136,701)(120,294,441 - 120,295,483)
sequence
gaattcttatccctcaggtggtggtgctacttagagaggctatgaaatgt
ggacaaaagtgggccactaggggttgtacccagcccttggttcctgccat
tcacactgcttcctggtttactgtgatgtggactgtctctgccataggct
gccacagccatgaactgagccttccagccatgcatgcctttctcaccacc
aggaacccaagccctcagaaaccatgagcccttcctctcttaagctcttt
ctagcaggtagtttggtcaaagcaaacataactaatacatacgtatttta
gaggctagagagatggctcagtggttaagagcagttattgctcttgcaga
ggatctcgagttccctttccaacatccacatagtggctcacaacaatctg
taactccagttttagggaatctgaaccccctttcgtgcctccattgacac
cagacactcctgtggtatagatacatacatacatgtaaacaaacactgat
acacataaaaccagtctagaaaagtttttttttaatttaaatcctttcat
atattcttttacttgtatttctaatgatcctaagaagcagctaccattgt
tattccaattttatagataagagagttaagacttgaccaagttaagaaac
ttgtgtctggtccaagagctgtgaaacttagccacaggtgctgcagactc
cctcggggacaaacaaagtggagagcggacagaggacagttgctaagttc
agaagggttgtgacctgtcaccaggtgagcatggggtctaacccaagagc
ttggctgctgttggcagctggcagctgggagatctgaggccgggctttgc
cttgtaagcttaagccgccctgtggaagcgaggagcccggctactggtga
agaagcccatggcccagagctgcagacagtggcttctgctgcagccaagg
gacggatagatcagtttttctgtcttggaaagtggtcagcataaggcaaa
ctaagagatcagacagagatccaccccaacac
gaattcagcattaccgacctggcccctttaacatggcatagggctctgtt
ctctacggtatttggtttaaacttgctaagtcagcatcttgctgcctctc
ttttccagttgaagagtgccaggctcgacgtgtccactgttaggaagtag
tgaagtgagactcgagtccccgacatggcaggccgggtgactggagcctg
tgctctggtttacttaggcagccaaaggaaaaacaatgagtcctcttttg
tgtgtgagtcagagcagagcctgtctactcacccttcctccaaggttatg
tgtctcccagaagaatatagccagaaccccagccctggggaagagccagg
cttggggccaccgctgccagaactggtttctgtctgctgctttctgcttt
ggtgtctctttgtatcttgtctgagggttcccttctgaggtgccattcag
tggatgtctagggagagagagagaaggtccctggctcaccacttcctggg
gcaaagggggtggagggagtaggaccggttatcaacactgattaaattca
gatctcagacactatcacccaggccaggagcctcatgcttagttgggatt
ctgatcttcattccatatttttgtttatttttctccaagtataaaaagac
agcatagactttcccccaaatgatgttcagtacattgcagtgcagaggca
gtaagaatgctccggagagaagctgcctatgtttttttcttttgtgtttc
tctcgtgcatcttcaggaaagagaacagaactcttgacggggataatctt
aagaggctccagataggagagacactgccatttgtcagcacccagtggtt
tctaagtctctttcatggctgagatccccttgagctgaatcatacagtcc
cccccccctccaacggcagaacacaaagcccttgactgagaggaaataac
ataatcagacactttttgcttagaggaaatgtgggtggaggcttcaagca
ggccgggctcctgtgagccacagtccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_120135666_120136701
seq2: B6Ng01-069L19.b_59_1079

seq1  CCTCAGGTGGTGGTGCTACTTAGAGAGGCTATGAAATGTGGACAAAAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGTGGTGGTGCTACTTAGAGAGGCTATGAAATGTGGACAAAAGTG  50

seq1  GGCCACTAGGGGTTGTACCCAGCCCTTGGTTCCTGCCATTCACACTGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACTAGGGGTTGTACCCAGCCCTTGGTTCCTGCCATTCACACTGCTT  100

seq1  CCTGGTTTACTGTGATGTGGACTGTCTCTGCCATAGGCTGCCACAGCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTTACTGTGATGTGGACTGTCTCTGCCATAGGCTGCCACAGCCAT  150

seq1  GAACTGAGCCTTCCAGCCATGCATGCCTTTCTCACCACCAGGAACCCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGAGCCTTCCAGCCATGCATGCCTTTCTCACCACCAGGAACCCAAG  200

seq1  CCCTCAGAAACCATGAGCCCTTCCTCTCTTAAGCTCTTTCTAGCAGGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAGAAACCATGAGCCCTTCCTCTCTTAAGCTCTTTCTAGCAGGTAG  250

seq1  TTTGGTCAAAGCAAACATAACTAATACATACGTATTTTAGAGGCTAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTCAAAGCAAACATAACTAATACATACGTATTTTAGAGGCTAGAGA  300

seq1  GATGGCTCAGTGGTTAAGAGCAGTTATTGCTCTTGCAGAGGATCTCGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTCAGTGGTTAAGAGCAGTTATTGCTCTTGCAGAGGATCTCGAGT  350

seq1  TCCCTTTCCAACATCCACATAGTGGCTCACAACAATCTGTAACTCCAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTCCAACATCCACATAGTGGCTCACAACAATCTGTAACTCCAGTT  400

seq1  TTAGGGAATCTGAACCCCCTTTCGTGCCTCCATTGACACCAGACACTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAATCTGAACCCCCTTTCGTGCCTCCATTGACACCAGACACTCCT  450

seq1  GTGGTATAGATACATACATACATGTAAACAAACACTGATACACATAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTATAGATACATACATACATGTAAACAAACACTGATACACATAAAAC  500

seq1  CAGTCTAGAAAAGTTTTTTTTTAATTTAAATCCTTTCATATATTCTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTAGAAAAGTTTTTTTTTAATTTAAATCCTTTCATATATTCTTTTA  550

seq1  CTTGTATTTCTAATGATCCTAAGAAGCAGCTACCATTGTTATTCCAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATTTCTAATGATCCTAAGAAGCAGCTACCATTGTTATTCCAATTT  600

seq1  TATAGATAAGAGAGTTAAGACTTGACCAAGTTAAGAAACTTGTGTCTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATAAGAGAGTTAAGACTTGACCAAGTTAAGAAACTTGTGTCTGGT  650

seq1  CCAAGAGCTGTGAAACTTAGCCACAGGTGCTGCAGACTCCCTCGGGGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGCTGTGAAACTTAGCCACAGGTGCTGCAGACTCCCTCGGGGACA  700

seq1  AACAAAGTGGAGAGCGGACAGAGGACAGTTGCTAAGTTCAGAAGGGTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGTGGAGAGCGGACAGAGGACAGTTGCTAAGTTCAGAAGGGTTGT  750

seq1  GACCTGTCACCAGGTGAGCATGGGGTCTAACCCAAGAGCTTGGCTGCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGTCACCAGGTGAGCATGGGGTCTAACCCAAGAGCTTGGCTGCTGT  800

seq1  TGGCAGCTGGCAGCTGGGAGATCTGAGGCCGGGCTTTGCCTTGTAAGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCTGGCAGCTGGGAGATCTGAGGCCGGGCTTTGCCTTGTAAGCTT  850

seq1  AAGGCCGCCCTGTGGAAGCGAGGAGCCCGGCTACTGGTGAAGAAGCCCAT  900
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AA-GCCGCCCTGTGGAAGCGAGGAGCCCGGCTACTGGTGAAGAAGCCCAT  899

seq1  GGCCCAGAAGCTGCAGACAGTGGCTTCTGCTGCAGCCAAGGGGAACCGGA  950
      ||||||| ||||||||||||||||||||||||||||||||||    ||||
seq2  GGCCCAG-AGCTGCAGACAGTGGCTTCTGCTGCAGCCAAGGG---ACGGA  945

seq1  TAGACCAGTTTTTCTTGTCCTTGGAAAAGTTGGTTCAGGCATAAGGGCAA  1000
      |||| ||||||||| ||| ||||| |||||  | ||| |||||| |||||
seq2  TAGATCAGTTTTTC-TGT-CTTGG-AAAGT--GGTCA-GCATAA-GGCAA  988

seq1  AACTTAAGAGATCAGACAGAGATCCACCCCCAACAC  1036
      |   |||||||||||||||||||||| |||||||||
seq2  A--CTAAGAGATCAGACAGAGATCCA-CCCCAACAC  1021

seq1: chr7_120294441_120295483
seq2: B6Ng01-069L19.g_66_1093 (reverse)

seq1  TGGGACTGTTGGCTCAAACAGGAGCCCGGCCTGCTTGAAGGCCTCCACCC  50
      |||||||| ||||||  |||||||||||||||||||||| ||||||||||
seq2  TGGGACTG-TGGCTC--ACAGGAGCCCGGCCTGCTTGAA-GCCTCCACCC  46

seq1  ACATTTTCCTTCCTAAGGCAAAAAGTGTCTGATTAATGTTTATTTTCCTT  100
      ||| ||||||  |||| ||||||||||||||||| ||| ||||||  | |
seq2  ACA-TTTCCT--CTAA-GCAAAAAGTGTCTGATT-ATG-TTATTT--CCT  88

seq1  CTCAGTCAAGGGCTTTGTGTTCTGCCGTTGGAGGGGGGGGGGGACTGTTA  150
      |||||||||||||||||||||||||||||||| |||||||||||||| ||
seq2  CTCAGTCAAGGGCTTTGTGTTCTGCCGTTGGA-GGGGGGGGGGACTG-TA  136

seq1  TGATTCAGCTCAAGGGGATCTCAGCCATGAAAGAGACTTAGAAACCACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCAGCTCAAGGGGATCTCAGCCATGAAAGAGACTTAGAAACCACTG  186

seq1  GGTTGCTGACAAATGGCAGTGTCTCTCCTATCTGGAGCCTCTTAAGATTA  250
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GG-TGCTGACAAATGGCAGTGTCTCTCCTATCTGGAGCCTCTTAAGATTA  235

seq1  TCCCCGTCAAGAGTTCTGTTCTCTTTCCTGAAGATGCACGAGAGAAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCGTCAAGAGTTCTGTTCTCTTTCCTGAAGATGCACGAGAGAAACAC  285

seq1  AAAAGAAAAAAACATAGGCAGCTTCTCTCCGGAGCATTCTTACTGCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAAAACATAGGCAGCTTCTCTCCGGAGCATTCTTACTGCCTCT  335

seq1  GCACTGCAATGTACTGAACATCATTTGGGGGAAAGTCTATGCTGTCTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGCAATGTACTGAACATCATTTGGGGGAAAGTCTATGCTGTCTTTT  385

seq1  TATACTTGGAGAAAAATAAACAAAAATATGGAATGAAGATCAGAATCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTGGAGAAAAATAAACAAAAATATGGAATGAAGATCAGAATCCCA  435

seq1  ACTAAGCATGAGGCTCCTGGCCTGGGTGATAGTGTCTGAGATCTGAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGCATGAGGCTCCTGGCCTGGGTGATAGTGTCTGAGATCTGAATTT  485

seq1  AATCAGTGTTGATAACCGGTCCTACTCCCTCCACCCCCTTTGCCCCAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTGTTGATAACCGGTCCTACTCCCTCCACCCCCTTTGCCCCAGGA  535

seq1  AGTGGTGAGCCAGGGACCTTCTCTCTCTCTCCCTAGACATCCACTGAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTGAGCCAGGGACCTTCTCTCTCTCTCCCTAGACATCCACTGAATG  585

seq1  GCACCTCAGAAGGGAACCCTCAGACAAGATACAAAGAGACACCAAAGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTCAGAAGGGAACCCTCAGACAAGATACAAAGAGACACCAAAGCAG  635

seq1  AAAGCAGCAGACAGAAACCAGTTCTGGCAGCGGTGGCCCCAAGCCTGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGCAGACAGAAACCAGTTCTGGCAGCGGTGGCCCCAAGCCTGGCT  685

seq1  CTTCCCCAGGGCTGGGGTTCTGGCTATATTCTTCTGGGAGACACATAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCAGGGCTGGGGTTCTGGCTATATTCTTCTGGGAGACACATAACC  735

seq1  TTGGAGGAAGGGTGAGTAGACAGGCTCTGCTCTGACTCACACACAAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGAAGGGTGAGTAGACAGGCTCTGCTCTGACTCACACACAAAAGA  785

seq1  GGACTCATTGTTTTTCCTTTGGCTGCCTAAGTAAACCAGAGCACAGGCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCATTGTTTTTCCTTTGGCTGCCTAAGTAAACCAGAGCACAGGCTC  835

seq1  CAGTCACCCGGCCTGCCATGTCGGGGACTCGAGTCTCACTTCACTACTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACCCGGCCTGCCATGTCGGGGACTCGAGTCTCACTTCACTACTTC  885

seq1  CTAACAGTGGACACGTCGAGCCTGGCACTCTTCAACTGGAAAAGAGAGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAGTGGACACGTCGAGCCTGGCACTCTTCAACTGGAAAAGAGAGGC  935

seq1  AGCAAGATGCTGACTTAGCAAGTTTAAACCAAATACCGTAGAGAACAGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGATGCTGACTTAGCAAGTTTAAACCAAATACCGTAGAGAACAGAG  985

seq1  CCCTATGCCATGTTAAAGGGGCCAGGTCGGTAATGCTGAATTC  1043
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATGCCATGTTAAAGGGGCCAGGTCGGTAATGCTGAATTC  1028