BAC Information

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BAC

Clone NameB6Ng01-069P16
Chromosome7 (Build37)
Map Location 34,126,791 - 34,127,793
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431
Downstream geneAbpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859, LOC627004, LOC100043398, LOC100043401, Scgb2b1, LOC668440, Abpz, LOC100043860, LOC627079, LOC635803, Abpg, LOC100043864, LOC100043865, Abpb, Abpa, LOC100043866, LOC100043867, LOC100043868, Wtip, Sae2, LOC100043410, Pdcd2l, Gpi1, 4931406P16Rik, EG619734
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069P16.bB6Ng01-069P16.g
ACCDH888122DH888123
length1,2541,051
definitionDH888122|Mus musculus domesticus DNA, BAC clone: B6Ng01-069P16, 5' end.DH888123|Mus musculus domesticus DNA, BAC clone: B6Ng01-069P16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcaacctcaatatgagccagctgaaagttgaactcctttaacc
ttgagttgcttttgattatggtctatatcactgcaataaaaagcaaacta
agatcaaaaggtagccagtgaaatttgaatctcttgtactttgacattga
actaagtatgtagcctggacaatttctaggatggattttccaaaaagtat
cattcactaatgttgatgatcaatcaagataatgctactcaaattcacta
ccttatctcctataatgtaaggcctgtatcaagacaaatcctcaatgggt
ttcatgtggtattaggataataaagaacaaacatggatgcatatgttgta
gtccttcagcttcataacacaagagcccccatggagcagaaacgttcaaa
gtgggggcatgtccctccttccaagctaatcatccagccacctcagtaaa
atgcctcacagaagctgtcccattggcagctcctcttaaaatagagccat
cataccatctcctcattttcaggcctcacgatagttgcagaagctgtata
tgaaaaattgacgtagtaacttgctagggtaaggtagagctgccacacag
gagctatccaagatgacaacaatttcctttttttgtcctgttttagtagg
tattttcttcatttacatttccaatgctatcccaaaagtcccccataccc
tacagccccactcccctatccccccaatcccacttcttggccctgtcctt
ctttcagggctcatgttccagcttttttgaaacaccactgcaggaactgc
actacaggagctgtccaaagtggcataacctcctctccatcctctccctc
cccacccacccaccaaattatcaaagagatggcacataagacaaagtagt
ctgtagacaggaatgacttcctacgctaaccataggcctgttgcagggaa
aagagaatgaatataaacccatcattccctgagagtgatgtccaccaatc
actgagcttatcagaaaactcactatcccagaggaggaaagcaacaatct
cagaacttccccaagcttagtactgaagacatcaccactactctggaaat
ctctgcccttagaagaaaacatcacttccagatccatattatgccatggt
gctttgctggatagagcagcgtctggaaactatgctctaccgacccatag
tattttatgagaattctctgtctgtgcgtaccttcactcgagaggaagag
ataa
gaattctcacctgaggaatactgaatggctaagaagcacctgaaaaatgt
tgtgcatgctcaatcatcagggaaatgcaaatcaaaacaatcctgagatt
ccacctcacaccagtcagcactgttaagataaaaaattcaggtgacagta
gatgctggtgaggatgtggagaaagagaaagactcctccaatgttgtttg
gattgctagctcgtacaaacactctggaaatcagtcatgctgttcctcag
aaaattggacatagaactaccatagaaccccacaatacccctgctgggca
tatatccagaagatgttccaaatgataagaaggacatgtgcttcactatg
ttcatagcagccttatttataatgtccagaagctggaaagaacccagata
tctctcaaaagaggcatatatgcctcagtacaagggaatgccagggccaa
gatgtaggagtgggtgactaggggactgggcaggcgggtatgggtgactt
tttggatgacattggaaatataaatgatgaaaatatataataacattttg
aaaaaaaatgaacatgaatgaaagactgtgttcttacaacttacagaaga
attccagaggatctgtagatgttacttctgggaattgatttccctccagt
caaaagacccaagacaaggtaatgtatttgggaaagaggttaatttgctt
catgatctgaaatgttgaaagtcaaggatagggcaaactcaggttgccag
ggacttgtaaagtctgatcccagggtacacagcagacggttacctgggga
ttgtagaagacaaagcagagactccacactgcttctcaagcacccatgat
atgctcactgaccaggcctgccacaatggggatcaatactcaatgtgggg
tattggtgtgttcctcatacatgttaatgcataggtggcccttctcggac
atgtgtcttttttttattattttttttttttaatgcagctgggtattagg
gaaacaaatacccaggcaggtggagaaaagtgtgtttaggctaatgaggg
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_34126791_34127793
seq2: B6Ng01-069P16.g_133_1121

seq1  ATCATCAGGGAAATGCAAATCAAAACAATCCTGAGATTCCACCTCACACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCAGGGAAATGCAAATCAAAACAATCCTGAGATTCCACCTCACACC  50

seq1  AGTCAGCACTGTTAAGATAAAAAATTCAGGTGACAGTAGATGCTGGTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCACTGTTAAGATAAAAAATTCAGGTGACAGTAGATGCTGGTGAG  100

seq1  GATGTGGAGAAAGAGAAAGACTCCTCCAATGTTGTTTGGATTGCTAGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGAGAAAGAGAAAGACTCCTCCAATGTTGTTTGGATTGCTAGCTC  150

seq1  GTACAAACACTCTGGAAATCAGTCATGCTGTTCCTCAGAAAATTGGACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAACACTCTGGAAATCAGTCATGCTGTTCCTCAGAAAATTGGACAT  200

seq1  AGAACTACCATAGAACCCCACAATACCCCTGCTGGGCATATATCCAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTACCATAGAACCCCACAATACCCCTGCTGGGCATATATCCAGAAG  250

seq1  ATGTTCCAAATGATAAGAAGGACATGTGCTTCACTATGTTCATAGCAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCAAATGATAAGAAGGACATGTGCTTCACTATGTTCATAGCAGCC  300

seq1  TTATTTATAATGTCCAGAAGCTGGAAAGAACCCAGATATCTCTCAAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATAATGTCCAGAAGCTGGAAAGAACCCAGATATCTCTCAAAAGA  350

seq1  GGCATATATGCCTCAGTACAAGGGAATGCCAGGGCCAAGATGTAGGAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATATGCCTCAGTACAAGGGAATGCCAGGGCCAAGATGTAGGAGTG  400

seq1  GGTGACTAGGGGACTGGGCAGGCGGGTATGGGTGACTTTTTGGATGACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTAGGGGACTGGGCAGGCGGGTATGGGTGACTTTTTGGATGACAT  450

seq1  TGGAAATATAAATGATGAAAATATATAATAACATTTTGAAAAAAAATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATATAAATGATGAAAATATATAATAACATTTTGAAAAAAAATGAA  500

seq1  CATGAATGAAAGACTGTGTTCTTACAACTTACAGAAGAATTCCAGAGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATGAAAGACTGTGTTCTTACAACTTACAGAAGAATTCCAGAGGAT  550

seq1  CTGTAGATGTTACTTCTGGGAATTGATTTCCCTCCAGTCAAAAGACCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGATGTTACTTCTGGGAATTGATTTCCCTCCAGTCAAAAGACCCAA  600

seq1  GACAAGGTAATGTATTTGGGAAAGAGGTTAATTTGCTTCATGATCTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGTAATGTATTTGGGAAAGAGGTTAATTTGCTTCATGATCTGAAA  650

seq1  TGTTGAAAGTCAAGGATAGGGCAAACTCAGGTTGCCAGGGACTTGTAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAAGTCAAGGATAGGGCAAACTCAGGTTGCCAGGGACTTGTAAAG  700

seq1  TCTGATCCCAGGGTACACAGCAGACGGTTACCTGGGGATTGTAGAAGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCCCAGGGTACACAGCAGACGGTTACCTGGGGATTGTAGAAGACA  750

seq1  AAGCAGAGACTCCACACTGCTTCTCAAGCACCCATGATATGCTCACTGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGACTCCACACTGCTTCTCAAGCACCCATGATATGCTCACTGAC  800

seq1  CAGGCCTGCCACAATGGGGATCAATACTCAATGT-GGGTATTGGTGTGTT  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CAGGCCTGCCACAATGGGGATCAATACTCAATGTGGGGTATTGGTGTGTT  850

seq1  CCTCATACATGTTAATGCATAGGTGGCCCTTCCTTCGGACATGTTTTTTT  899
      ||||||||||||||||||||||||||||||||  |||||||||       
seq2  CCTCATACATGTTAATGCATAGGTGGCCCTTC--TCGGACATG-------  891

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATGCAGACTGGGTATT  949
           | | |||||||| || ||||||||||||||||||| |||||||||
seq2  -----TGTCTTTTTTTTATTATTTTTTTTTTTTAATGCAG-CTGGGTATT  935

seq1  TAGGAGACAAATTACCCAGGCAGGTGGAGAAAAAGTGT-TTTAGGC-AAT  997
        ||| ||||| ||||||||||||||||| |||||||| ||||||| |||
seq2  AGGGAAACAAA-TACCCAGGCAGGTGGAG-AAAAGTGTGTTTAGGCTAAT  983

seq1  GAGGGC  1003
      ||||||
seq2  GAGGGC  989