BAC Information

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BAC

Clone NameB6Ng01-070L16
Chromosome7 (Build37)
Map Location 34,359,897 - 34,360,741
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859, LOC627004
Downstream geneLOC100043398, LOC100043401, Scgb2b1, LOC668440, Abpz, LOC100043860, LOC627079, LOC635803, Abpg, LOC100043864, LOC100043865, Abpb, Abpa, LOC100043866, LOC100043867, LOC100043868, Wtip, Sae2, LOC100043410, Pdcd2l, Gpi1, 4931406P16Rik, EG619734, Lsm14a, LOC668460, LOC668464
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070L16.bB6Ng01-070L16.g
ACCDH888640DH888641
length1,238966
definitionDH888640|Mus musculus domesticus DNA, BAC clone: B6Ng01-070L16, 5' end.DH888641|Mus musculus domesticus DNA, BAC clone: B6Ng01-070L16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgatctcttcaaggctttttatcttgaacgggtgtggattttg
tcaaatgttgttcagcatctaatgagatgatcattagtttttgtctttaa
gtttttttatatagtggattacgttgatggatttccatatattaaaccat
ccatgcatcccttggatgaagcctctttagttatgatagatgatcatttt
gttggattcttggatttggtttgcgatgattttattgagtatttttgcat
tgatattcataagggaaattggtctgaagttctctttcttccttggttct
ttgtgtgctttaggtatcaaagtaattgtggcttcatagaatgaactggg
tagagtaccttctctttctattttgtgaaatagtttgaggagtgttggaa
ttaggtctgctttgaaggtctgacagaattctgcaataaaccattctgct
cctgggctttttttggctgggagactattgatgagtgctcttatatccta
aggtgaaatggaactgttttgatccttaatctgatcctgatttcactttg
gtacctggtatctatctaggaagtggtcgatttcatccaagttttctagt
tttattgagtatagcctttttagtagtatctgatgatgttttagatttcc
tgaaattctgttgttatgtttcagttttaatttttgattttgttaattat
gatactatccctgtgctctatgggtaagggtttatctatgttgttgattt
tctcaaagaaccaactcctggtttggttgattttttgagtagttcttttt
gcttccacttgtttgatttcagccctgagtttgattatttcctgcaatct
actcctcttgtgtgaatttatttcctttagttttagagcttgtaggtgtg
ctgtcagctgctagtgtatgctctctctagtttctttttgaatgcactca
agactatgagatttcctctttggactgccttcattgtggtcccatatttt
ttggtatgttgtagcctccttttcataaacctctaaaaagtcttttaatt
tctttctttatttcatccttgactaaggaatcatgagtagaagtggttgt
ttaatttccacgtgaatggttggcctcctcattaagtgtatgaagaacgg
cctggtcgtggtggatcctaaggatgcatgggatcatatctatatttaat
taggcgcttgtgtgggactaatatatggtgcaatttga
gaattctctttttctttttcctcctctcccctggctgatggaagtgcatc
cttgtttttgcttctatccagcctttggtatatcagtttttattaacaaa
tcagagcataaatttttaaataacagacctggtctcaaataattagttga
agacggttgagatagctcagtgattaaaggtgcactgattgaaggtgaac
acctgagttcaaatttcagaacccacctggtagaagaagagaagtaactt
ctctaaattgtcatttgaccttccatgtacacacacacacacacacacac
acacagcttgatacctctgtctatacacagtcacacacaaacaagcacac
aaacacatgaacacacacctacaaatgtctgtgaaaactggcatcagtaa
acattaagaagctcctaatggaaaaatatgaaacaatttgtcaaacaaac
taaataacacatgagattgtactataatggtgaaataacctataaactca
tgctggtgtgaatggttgcatgacaggtaaatgaacattactgaacccgg
tgggaccttcgggacccagaggtctctccactctgcaggacccctagcaa
cccaggacctcagaatcatgggtgagtggaacagaccatcatcatcaaag
aatgctagagggtcttgtgccagcaggaagagggacaaagtaaccccaaa
ctaccagaggcagggattcattctagttgggcccagcccggccatcttct
tcttgaacccagtggagagagccaaggacctagaggactccccacaccac
aggacccctagcacacccaaaacctaggcatcacgggactcaggatgtag
atcggagctccagacttctgaatacctgccctgaaagaggagagattgcc
tgcagagactgctctgaccactatgactcaagagagagttgaactcccag
acgctgtcagaggcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_34359897_34360741
seq2: B6Ng01-070L16.g_66_945

seq1  GAATTCTCTTTTTCTTTTTCTTCCTCTTCCCTGGCTGATGGAAGTGCATT  50
      |||||||||||||||||||| |||||| ||||||||||||||||||||| 
seq2  GAATTCTCTTTTTCTTTTTCCTCCTCTCCCCTGGCTGATGGAAGTGCATC  50

seq1  CCTGTTTTCTCTTCTACTCAGCCATTGGTACATCAGTTTTTATTAAC---  97
      | ||||||  ||||||  ||||| |||||| ||||||||||||||||   
seq2  CTTGTTTTTGCTTCTATCCAGCCTTTGGTATATCAGTTTTTATTAACAAA  100

seq1  --------------------------------------ATAATTAGTTGA  109
                                            ||||||||||||
seq2  TCAGAGCATAAATTTTTAAATAACAGACCTGGTCTCAAATAATTAGTTGA  150

seq1  AAACTGTTGAGATTGCTCAGTGATTAAAGGTGCACTAATTGAAGG-----  154
      | || |||||||| |||||||||||||||||||||| ||||||||     
seq2  AGACGGTTGAGATAGCTCAGTGATTAAAGGTGCACTGATTGAAGGTGAAC  200

seq1  ---TGAGTTCAAATTCCAGATCCCACCTGGT---AGAAGGGAAGTAACTT  198
         |||||||||||| |||| ||||||||||   ||||| ||||||||||
seq2  ACCTGAGTTCAAATTTCAGAACCCACCTGGTAGAAGAAGAGAAGTAACTT  250

seq1  CT-TAAATTGTCATTTGATCTTCCAATGTACACACACACACACACACACA  247
      || ||||||||||||||| ||||| ||||        |||||||||||||
seq2  CTCTAAATTGTCATTTGACCTTCC-ATGT--------ACACACACACACA  291

seq1  CACACACACACACACCTTGATACCTCTGTCTATACACAGGCTCACACACA  297
      |||||||||||||| |||||||||||||||||||||||| | |||||| |
seq2  CACACACACACACAGCTTGATACCTCTGTCTATACACAGTCACACACAAA  341

seq1  CAAGCACACAAACACATGAACACACACCTATAAATGTCTGTGAAAACTGG  347
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAAGCACACAAACACATGAACACACACCTACAAATGTCTGTGAAAACTGG  391

seq1  CATCAGTAAGCATTAAGAAGCTCCTAATGGAGAACTATGAAACAATTTGA  397
      ||||||||| ||||||||||||||||||||| || |||||||||||||| 
seq2  CATCAGTAAACATTAAGAAGCTCCTAATGGAAAAATATGAAACAATTTGT  441

seq1  CAAACAAACTCAATAACATTATATTAGATTGTACTATATATGGTGAAATA  447
      |||||||||| ||||||   | || ||||||||||||| |||||||||||
seq2  CAAACAAACTAAATAAC---ACATGAGATTGTACTATA-ATGGTGAAATA  487

seq1  ACCTATAAACCCATGCTGGTGTGAATGGTTGCATGGCAAGTAAATGAACA  497
      |||||||||| |||||||||||||||||||||||| || |||||||||||
seq2  ACCTATAAACTCATGCTGGTGTGAATGGTTGCATGACAGGTAAATGAACA  537

seq1  TGACTGAACCCGAAGTGTCCTGGTGGGAACCAGAGGTCTCTCCACTCCAC  547
      | ||||||||||  | | |||   |||| ||||||||||||||||||  |
seq2  TTACTGAACCCGGTGGGACCT-TCGGGACCCAGAGGTCTCTCCACTCTGC  586

seq1  AAGACACCTAGCACACCCAGGACCTCAGAATCATGGGTGAGTGGAACAGA  597
      | ||| ||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGGACCCCTAGCA-ACCCAGGACCTCAGAATCATGGGTGAGTGGAACAGA  635

seq1  ACTTCAGCACCAAAGAATCCCAGAGGGTCTTGTGTGCCAGCAGGAAGAGG  647
       | ||| || |||||||| | |||||||||  ||||||||||||||||||
seq2  CCATCATCATCAAAGAATGCTAGAGGGTCT--TGTGCCAGCAGGAAGAGG  683

seq1  GATAAAGAAACCCTGAATGACCAGAAGCTGGGATTCGTTCTGAATGGGGC  697
      || |||| |||||  ||  |||||| || ||||||| ||||   |||| |
seq2  GACAAAGTAACCCCAAACTACCAGAGGCAGGGATTCATTCTAGTTGGGCC  733

seq1  CAGACCCCCCCATCTTCTTCCTGAACTCAGCGGAGGGAGCCAAGGAACCA  747
      ||| |||  ||||||||||| ||||| ||| |||| |||||||||| | |
seq2  CAG-CCCGGCCATCTTCTTCTTGAACCCAGTGGAGAGAGCCAAGGACCTA  782

seq1  GAGGACTCTCCATACCACAGGACCCCTAGCACACCCAAAACATCGGCAGC  797
      |||||||| ||| |||||||||||||||||||||||||||| | |||| |
seq2  GAGGACTCCCCACACCACAGGACCCCTAGCACACCCAAAACCTAGGCATC  832

seq1  ATGGGACTCATGAACTGGATTGGAGCTCCAGACTTCTGTACACCTGCC  845
      | |||||||| ||  | ||| ||||||||||||||||| | |||||||
seq2  ACGGGACTCAGGATGTAGATCGGAGCTCCAGACTTCTGAATACCTGCC  880