BAC Information

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BAC

Clone NameB6Ng01-070N16
Chromosome7 (Build37)
Map Location 129,782,156 - 129,919,322
singlet/doubletdoublet
Overlap geneCacng3
Upstream geneUsp31, Scnn1g, Scnn1b, Cog7, Gga2, Ears2, Ubfd1, Ndufab1, Palb2, Dctn5, Plk1, Ern2, 2010110P09Rik, Prkcb1, LOC668486
Downstream gene4930413G21Rik, Rbbp6, LOC628696, LOC100042977, LOC100042981, Tnrc6a, Slc5a11, Arhgap17, Lcmt1, Aqp8, Zkscan2, LOC100043482
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070N16.bB6Ng01-070N16.g
ACCDH888722DH888723
length1,141559
definitionDH888722|Mus musculus domesticus DNA, BAC clone: B6Ng01-070N16, 5' end.DH888723|Mus musculus domesticus DNA, BAC clone: B6Ng01-070N16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,782,156 - 129,783,315)(129,918,761 - 129,919,322)
sequence
gaattctgggtaaaaaccaagccctctgcaagagcaacaagtgctcttaa
ccaccgagccatctctccagcccaaaattcagttgattcttttttaaact
gactgtttctttggttcacaatggaggttactgtggtctgggcactttag
gttatctcaggcagacttgtctctgcatatcaggcacctgaaacgtcaac
cggtaacaactctagatgaccttatccacataacagtgattgacagacca
gaaggtcagtgggtggtcagtttttgttttgcatccttactctctgttag
tccagaagtctggcatagactgcttcatagagtggatttaatgactctaa
agagcaggcaagagagagaggcccaagtgttctcttcaagtctctccttc
tttcccatataccagttcaagggaagaggaaacagacttcaccctgggac
aggagattttgcaaaagcaaatgaatataaggatagggaaaatttatggc
ccaattttgaatctaccatactgtccctcagcggaattatttatgaacac
agagaatataaaaaacatagaacaaacaggaaagaaatttccagggatat
cctgggcttccccatggtcagactctaatcttaacaacaaacagtaccag
aatttaggtttgtgggctggataacctgagcccactggaaagctgcttgt
tcaagctcttcaaaccaacaatggtaaacttttagatcctcagatttaca
tctgccatacttttctttctccagcatcatatccaagccagggcactgat
ggaaggagaagaaaaggaaagcaagagagaaagggaatcacattaaaaaa
cttaatctgatgccacctccaatatctgcctctaacatcccaaagctagt
atctgagatcctatgctcttgtggggtttggtggatgaatgtcatggccc
atgtgaaatttactgagagtgttaggactaccccctaggaattgatgctg
ctcgaaagttatccccatttcagaaacatccaggttgagtctagtctgtc
aggatgaaacacacttcctctgcaagtttgttacatgatgctgactttcc
tgacatttgcttggttttagctgctggggggaaaaaaaaaa
ttctctgaggaagtgactggttagctcggacctgaaggttgacaaggaaa
caaggtatttagagagggacgacttcaagttgaggaagcatcaactgcaa
aggcaagaaactcacttagcttgatcaaggactaaaactgggagatggca
agactggggtgcaagtcgcaatatgcacattgcatggagtatcatgagta
ggtcagcagcctctcggaacacacgatccttctgaacataggaatgtgca
tttatttacttaagcacctttgaaactttgtaggttgtcgtatgctgttt
gtctcacatgctgaaggtctgctccctaaatggtggtctaatagttgaga
ggtaattggatgccaaggactctagccgataatcaatcccttgatggagt
cacaatacaacggtgtattgggaggtggtggtatgtagtaggtgaagcct
ttctggaggaagcaaatcactaagtactgaaaagacgtccctttggcccc
agcacctgtctttattcctatgcttcctagccaagtagctgggcagttct
gcgccactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_129782156_129783315
seq2: B6Ng01-070N16.b_46_1186

seq1  GAATTCTGGGTAAAAACCAAGCCCTCTGCAAGAGCAACAAGTGCTCTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGTAAAAACCAAGCCCTCTGCAAGAGCAACAAGTGCTCTTAA  50

seq1  CCACCGAGCCATCTCTCCAGCCCAAAATTCAGTTGATTCTTTTTTAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCGAGCCATCTCTCCAGCCCAAAATTCAGTTGATTCTTTTTTAAACT  100

seq1  GACTGTTTCTTTGGTTCACAATGGAGGTTACTGTGGTCTGGGCACTTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTTTCTTTGGTTCACAATGGAGGTTACTGTGGTCTGGGCACTTTAG  150

seq1  GTTATCTCAGGCAGACTTGTCTCTGCATATCAGGCACCTGAAACGTCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCTCAGGCAGACTTGTCTCTGCATATCAGGCACCTGAAACGTCAAC  200

seq1  CGGTAACAACTCTAGATGACCTTATCCACATAACAGTGATTGACAGACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTAACAACTCTAGATGACCTTATCCACATAACAGTGATTGACAGACCA  250

seq1  GAAGGTCAGTGGGTGGTCAGTTTTTGTTTTGCATCCTTACTCTCTGTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTCAGTGGGTGGTCAGTTTTTGTTTTGCATCCTTACTCTCTGTTAG  300

seq1  TCCAGAAGTCTGGCATAGACTGCTTCATAGAGTGGATTTAATGACTCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAGTCTGGCATAGACTGCTTCATAGAGTGGATTTAATGACTCTAA  350

seq1  AGAGCAGGCAAGAGAGAGAGGCCCAAGTGTTCTCTTCAAGTCTCTCCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGGCAAGAGAGAGAGGCCCAAGTGTTCTCTTCAAGTCTCTCCTTC  400

seq1  TTTCCCATATACCAGTTCAAGGGAAGAGGAAACAGACTTCACCCTGGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCATATACCAGTTCAAGGGAAGAGGAAACAGACTTCACCCTGGGAC  450

seq1  AGGAGATTTTGCAAAAGCAAATGAATATAAGGATAGGGAAAATTTATGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATTTTGCAAAAGCAAATGAATATAAGGATAGGGAAAATTTATGGC  500

seq1  CCAATTTTGAATCTACCATACTGTCCCTCAGCGGAATTATTTATGAACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTTGAATCTACCATACTGTCCCTCAGCGGAATTATTTATGAACAC  550

seq1  AGAGAATATAAAAAACATAGAACAAACAGGAAAGAAATTTCCAGGGATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATATAAAAAACATAGAACAAACAGGAAAGAAATTTCCAGGGATAT  600

seq1  CCTGGGCTTCCCCATGGTCAGACTCTAATCTTAACAACAAACAGTACCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGCTTCCCCATGGTCAGACTCTAATCTTAACAACAAACAGTACCAG  650

seq1  AATTTAGGTTTGTGGGCTGGATAACCTGAGCCCACTGGAAAGCTGCTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGGTTTGTGGGCTGGATAACCTGAGCCCACTGGAAAGCTGCTTGT  700

seq1  TCAAGCTCTTCAAACCAACAATGGTAAACTTTTAGATCCTCAGATTTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCTCTTCAAACCAACAATGGTAAACTTTTAGATCCTCAGATTTACA  750

seq1  TCTGCCATACTTTTCTTTCTCCAGCATCATATCCAAGCCAGGGCACTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCATACTTTTCTTTCTCCAGCATCATATCCAAGCCAGGGCACTGAT  800

seq1  GGAAGGAGAAGAAAAGGAAAGCAAGAGAG-AAGGGAATCACATTAAAAAA  849
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGAAGGAGAAGAAAAGGAAAGCAAGAGAGAAAGGGAATCACATTAAAAAA  850

seq1  CTTAATCTGATGCCACCTCCAATATCTGCCTCTAACATCCCAAAGCTAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATCTGATGCCACCTCCAATATCTGCCTCTAACATCCCAAAGCTAGT  900

seq1  ATCTGAGATCCTATGCTCTTGTGGGGTTTGGTGGATGAATGTCATGGCCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGATCCTATGCTCTTGTGGGGTTTGGTGGATGAATGTCATGGCCC  950

seq1  ATGTGAAATTTTACTGAGAGTGTTAGGACTACCCCCTAGGAATTGATGCT  999
      |||||||| |||||||||||||||||||||||||||||||||||||||| 
seq2  ATGTGAAA-TTTACTGAGAGTGTTAGGACTACCCCCTAGGAATTGATGC-  998

seq1  TGCTCGAAAAGTTAATCCCCATTTCAAGAAACAATCCAGGTTTGAGTTCT  1049
      |||||| |||||| ||||||||||| |||||| ||||||| ||||| |||
seq2  TGCTCG-AAAGTT-ATCCCCATTTC-AGAAAC-ATCCAGG-TTGAG-TCT  1042

seq1  AGTTCTTGTCCAGGGAATGAAACACACTTTCCTCTGCAGAGTTTTGTACC  1099
      |||   ||| ||||  ||||||||||| |||||||||| || |||||  |
seq2  AGT--CTGT-CAGG--ATGAAACACAC-TTCCTCTGCA-AG-TTTGTTAC  1084

seq1  ATGAATGCTGACTTTCCTGACATTTTGGCCTGTGTCTTAGCTGCTGTGGG  1149
      ||| |||||||||||||||||||||  || || || |||||||||| |||
seq2  ATG-ATGCTGACTTTCCTGACATTT--GCTTG-GTTTTAGCTGCTGGGGG  1130

seq1  GAAAAAAAAAA  1160
      |||||||||||
seq2  GAAAAAAAAAA  1141

seq1: chr7_129918761_129919322
seq2: B6Ng01-070N16.g_67_631 (reverse)

seq1  CAGTGGAGCAGAGCTGCCCAGCT-CATGGCTAGGAAGCA-AGGAGATATA  48
      |||||| ||||| |||||||||| | ||||||||||||| |||| ||| |
seq2  CAGTGGCGCAGAACTGCCCAGCTACTTGGCTAGGAAGCATAGGA-ATAAA  49

seq1  GA-AGGTGCTGGGGCC-AAGGTACGTCTTTTCAGTACTTAGTGATCTGCT  96
      || ||||||||||||| |||| ||||||||||||||||||||||| ||||
seq2  GACAGGTGCTGGGGCCAAAGGGACGTCTTTTCAGTACTTAGTGATTTGCT  99

seq1  TCCTCCAGCTAGGCTTCACCTACTACATACCACCACCTCCCAATACACCG  146
      ||||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAGAAAGGCTTCACCTACTACATACCACCACCTCCCAATACACCG  149

seq1  TTGTATTGTGACTCCATCAAGGGATTGATTATCGGCTAGAGTCCTTGGCA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTGTGACTCCATCAAGGGATTGATTATCGGCTAGAGTCCTTGGCA  199

seq1  TCCAATTACCTCTCAACTATTAGACCACCATTTAGGGAGCAGACCTTCAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTACCTCTCAACTATTAGACCACCATTTAGGGAGCAGACCTTCAG  249

seq1  CATGTGAGACAAACAGCATACGACAACCTACAAAGTTTCAAAGGTGCTTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGAGACAAACAGCATACGACAACCTACAAAGTTTCAAAGGTGCTTA  299

seq1  AGTAAATAAATGCACATTCCTATGTTCAGAAGGATCGTGTGTTCCGAGAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATAAATGCACATTCCTATGTTCAGAAGGATCGTGTGTTCCGAGAG  349

seq1  GCTGCTGACCTACTCATGATACTCCATGCAATGTGCATATTGCGACTTGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGACCTACTCATGATACTCCATGCAATGTGCATATTGCGACTTGC  399

seq1  ACCCCAGTCTTGCCATCTCCCAGTTTTAGTCCTTGATCAAGCTAAGTGAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGTCTTGCCATCTCCCAGTTTTAGTCCTTGATCAAGCTAAGTGAG  449

seq1  TTTCTTGCCTTTGCAGTTGATGCTTCCTCAACTTGAAGTCGTCCCTCTCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGCCTTTGCAGTTGATGCTTCCTCAACTTGAAGTCGTCCCTCTCT  499

seq1  AAATACCTTGTTTCCTTGTCAACCTTCAGGTCCGAGCTAACCAGTCACTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCTTGTTTCCTTGTCAACCTTCAGGTCCGAGCTAACCAGTCACTT  549

seq1  CCTCAGAGAAGAATTC  562
      ||||||||||||||||
seq2  CCTCAGAGAAGAATTC  565