BAC Information

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BAC

Clone NameB6Ng01-071G24
Chromosome7 (Build37)
Map Location 36,396,296 - 36,537,017
singlet/doubletdoublet
Overlap geneAnkrd27, Pdcd5, Dpy19l3
Upstream geneKctd15, Chst8, Pepd, Cebpg, Cebpa, Slc7a10, Wdr88, Gpatch1, Rhpn2, C230052I12Rik, Ccdc123, Slc7a9, 2410004F06Rik, Nudt19, Rgs9bp
Downstream genezfp507, LOC100043872, EG668988, LOC668507, Tshz3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071G24.bB6Ng01-071G24.g
ACCDH889139DH889140
length1,113976
definitionDH889139|Mus musculus domesticus DNA, BAC clone: B6Ng01-071G24, 5' end.DH889140|Mus musculus domesticus DNA, BAC clone: B6Ng01-071G24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,535,902 - 36,537,017)(36,396,296 - 36,397,264)
sequence
gaattcttagcagccagagctagtaggtagcagagaaagctgtttaataa
gataaaaggtctctcagttggaaagctggaccatttggccaagctgatga
aaggcatattaggtaatttggagtagtttctgatggtgtgcagttaaaat
ctatgttagattgtgtcttttttttttttttaattacatgtatttatttg
ccttgtatatgtggtggctgaacagggcatgcatgtgaggctctgaggac
aactagcaagagactgttctctcttcccaccttgtgggttaaagaaattc
aactcgggtcatcaggctgagcagcaagcatccccactcactggctgcct
cgccagcccctggcttggtccttgtttctgaagatgtatttgtgtatttt
tacgtgtatgagtgttctgcctgcacatgcactacatgtgtgtctggcgt
cccctgaggtcagaagtgggtattggcttccctagaactggagttacagt
tggttctgagccaccatatgggtgataggaactgaacccgggtcctctgc
aagagcaatgaatgttcttaactcctgagccattgttccagcccccattt
tgttttattttttaatttaaaaaacaaacaaaaaaaacaaccaacaactt
tgaagatggctcattttatgaaatcacatcagaaaaaaaaaaaaaaaaaa
agcaaccttgaaaataaaagacaattttaaaaagaaggaaaacctgcttc
ggccaacctgctcatccagggagtagatgacggtattcatcttgctgcgt
gaatgtttcgtctgcacgtggctaccctcaagcagccttataagcgaagc
aagagccatgcgctgctctgggagcacgctgctcttcccgtcccttgtcc
tgagcccttcaaaagtacaccaactgcatgtgcctggctgtcagaaagag
gaaggaaccctcagaggtcagaaggggcatcaggtccctggatctggggt
tacagtttaagtcactatgttaggtactgagaatggaacctggtgtcctc
tgtactgcaatagtgctcttaattcctgaaccatttttcaaccccttaga
aggttagaatatt
gaattccccagtgaggggctgggggtatggctcagtggtagagcacctgc
ctagaatcccccagtgaggggctgggggcgtggctcagtggtagagcccc
tgcctagaatcccccagtgaggggctgtgtgtgtgagagtcagtgttgat
aactttgattcagattctgcagtgagaagctggagtcatttctttaagat
agggctttggctagcatggtaaggccctggcactgcaaaacaaagcaagc
ccacagtgaaacaaacaatatagtattgaaagtcttccctcagacaccac
ctgcatgcacatagtgttagccatcatgatcatcaggtggtaataatcac
taatagctaatgaagtgtaaatttctagatttttagattttatttgtgtg
tgtatgtgtgtgtttgtgtagacatatgtgtgcagtacctgtaaaagcca
taagaggccatcagattccctgcagctggatttacaggcagttgtgagcc
acctgatataggagctgggaagtgaacttctagaagagcagcaggcatct
agccattccccagccccaaatttctagacctttttgtgttcgggtaagca
ttacctttgataggaaaagctgaatatatgaatttgggtggatccctgaa
atgcactaagtgtttgggagtgagagaggagggcaggaattcctttgtgt
ctttcctagatttttttttttctccagtgaattagacagacgtttttcct
gagcagattagtaaaacaagattcctcctgctgcttgacatcaggaagtt
agaagacagtgtcgggtgatgttgtccacagccctggataaagcagcaga
gtcaggcaattcatgccgagaagggaggtcaggagggggttggaggtcag
gattagccaagtgtcaatcttggatacgagatggcgtgtatgtggcaaat
ccacccttgtagaggactttcttcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_36535902_36537017
seq2: B6Ng01-071G24.b_45_1157 (reverse)

seq1  AATAATCTAA-CATCTAGGGGGTTGGAGAAATGGTTCAGGAATTAAGAGC  49
      |||| ||||| | |||| |||||| || ||||||||||||||||||||||
seq2  AATATTCTAACCTTCTAAGGGGTT-GAAAAATGGTTCAGGAATTAAGAGC  49

seq1  ACTTATTGCAGTTACAGAGGACA-CAGGTTCCATTCTCAGTACCTAACAT  98
      || |||||||| ||||||||||| ||||||||||||||||||||||||||
seq2  AC-TATTGCAG-TACAGAGGACACCAGGTTCCATTCTCAGTACCTAACAT  97

seq1  AGTGACTTAAACTGTAACCCCAGATCCAGGGAACCTGATGCCCCTTTCTG  148
      ||||||||||||||||||||||||||||||| |||||||||||| |||||
seq2  AGTGACTTAAACTGTAACCCCAGATCCAGGG-ACCTGATGCCCC-TTCTG  145

seq1  ACCTCTGAGGGTTCCTTCCTCTTTCTGACAGCCAGGCACATGCAGTTGGT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGAGGGTTCCTTCCTCTTTCTGACAGCCAGGCACATGCAGTTGGT  195

seq1  GTACTTATGAAGGGCTCAGGACAAGGAACGGGAAGAGCAGCGTGCT-CCA  247
      |||||| ||||||||||||||||||| ||||||||||||||||||| |||
seq2  GTACTTTTGAAGGGCTCAGGACAAGGGACGGGAAGAGCAGCGTGCTCCCA  245

seq1  GAGCAGCGCATGGCTCTTGCTTCGCTTTATAAGGCTGCTTGAGGGTAGCC  297
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAGCAGCGCATGGCTCTTGCTTCGC-TTATAAGGCTGCTTGAGGGTAGCC  294

seq1  ACGTGCAGACGAAACATTCACGCAGCAAGATGAATACCGTCATCTACTCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGCAGACGAAACATTCACGCAGCAAGATGAATACCGTCATCTACTCC  344

seq1  CTGGATGAGCAGGTTGGCCGAAGCAGGTTTTCCTTCTTTTTAAAATTGTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGAGCAGGTTGGCCGAAGCAGGTTTTCCTTCTTTTTAAAATTGTC  394

seq1  TTTTATTTTCAAGGTTGCTTTTTTTTTTTTTTTTTTTCTGATGTGATTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTCAAGGTTGCTTTTTTTTTTTTTTTTTTTCTGATGTGATTTC  444

seq1  ATAAAATGAGCCATCTTCAAAGTTGTTGGTTGTTTTTTTTGTTTGTTTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGAGCCATCTTCAAAGTTGTTGGTTGTTTTTTTTGTTTGTTTTT  494

seq1  TAAATTAAAAAATAAAACAAAATGGGGGCTGGAACAATGGCTCAGGAGTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAAAAAATAAAACAAAATGGGGGCTGGAACAATGGCTCAGGAGTT  544

seq1  AAGAACATTCATTGCTCTTGCAGAGGACCCGGGTTCAGTTCCTATCACCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACATTCATTGCTCTTGCAGAGGACCCGGGTTCAGTTCCTATCACCC  594

seq1  ATATGGTGGCTCAGAACCAACTGTAACTCCAGTTCTAGGGAAGCCAATAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGTGGCTCAGAACCAACTGTAACTCCAGTTCTAGGGAAGCCAATAC  644

seq1  CCACTTCTGACCTCAGGGGACGCCAGACACACATGTAGTGCATGTGCAGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTCTGACCTCAGGGGACGCCAGACACACATGTAGTGCATGTGCAGG  694

seq1  CAGAACACTCATACACGTAAAAATACACAAATACATCTTCAGAAACAAGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACACTCATACACGTAAAAATACACAAATACATCTTCAGAAACAAGG  744

seq1  ACCAAGCCAGGGGCTGGCGAGGCAGCCAGTGAGTGGGGATGCTTGCTGCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGCCAGGGGCTGGCGAGGCAGCCAGTGAGTGGGGATGCTTGCTGCT  794

seq1  CAGCCTGATGACCCGAGTTGAATTTCTTTAACCCACAAGGTGGGAAGAGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGATGACCCGAGTTGAATTTCTTTAACCCACAAGGTGGGAAGAGA  844

seq1  GAACAGTCTCTTGCTAGTTGTCCTCAGAGCCTCACATGCATGCCCTGTTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGTCTCTTGCTAGTTGTCCTCAGAGCCTCACATGCATGCCCTGTTC  894

seq1  AGCCACCACATATACAAGGCAAATAAATACATGTAATTAAAAAAAAAAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCACATATACAAGGCAAATAAATACATGTAATTAAAAAAAAAAAA  944

seq1  AAGACACAATCTAACATAGATTTTAACTGCACACCATCAGAAACTACTCC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACACAATCTAACATAGATTTTAACTGCACACCATCAGAAACTACTCC  994

seq1  AAATTACCTAATATGCCTTTCATCAGCTTGGCCAAATGGTCCAGCTTTCC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACCTAATATGCCTTTCATCAGCTTGGCCAAATGGTCCAGCTTTCC  1044

seq1  AACTGAGAGACCTTTTATCTTATTAAACAGCTTTCTCTGCTACCTACTAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGAGACCTTTTATCTTATTAAACAGCTTTCTCTGCTACCTACTAG  1094

seq1  CTCTGGCTGCTAAGAATTC  1116
      |||||||||||||||||||
seq2  CTCTGGCTGCTAAGAATTC  1113

seq1: chr7_36396296_36397264
seq2: B6Ng01-071G24.g_67_1042

seq1  GAATTCCCCAGTGAGGGGCTGGGGGTATGGCTCAGTGGTAGAGCACCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCAGTGAGGGGCTGGGGGTATGGCTCAGTGGTAGAGCACCTGC  50

seq1  CTAGAATCCCCCAGTGAGGGGCTGGGGGCGTGGCTCAGTGGTAGAGCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATCCCCCAGTGAGGGGCTGGGGGCGTGGCTCAGTGGTAGAGCCCC  100

seq1  TGCCTAGAATCCCCCAGTGAGGGGCTGTGTGTGTGAGAGTCAGTGTTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGAATCCCCCAGTGAGGGGCTGTGTGTGTGAGAGTCAGTGTTGAT  150

seq1  AACTTTGATTCAGATTCTGCAGTGAGAAGCTGGAGTCATTTCTTTAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGATTCAGATTCTGCAGTGAGAAGCTGGAGTCATTTCTTTAAGAT  200

seq1  AGGGCTTTGGCTAGCATGGTAAGGCCCTGGCACTGCAAAACAAAGCAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTTTGGCTAGCATGGTAAGGCCCTGGCACTGCAAAACAAAGCAAGC  250

seq1  CCACAGTGAAACAAACAATATAGTATTGAAAGTCTTCCCTCAGACACCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTGAAACAAACAATATAGTATTGAAAGTCTTCCCTCAGACACCAC  300

seq1  CTGCATGCACATAGTGTTAGCCATCATGATCATCAGGTGGTAATAATCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGCACATAGTGTTAGCCATCATGATCATCAGGTGGTAATAATCAC  350

seq1  TAATAGCTAATGAAGTGTAAATTTCTAGATTTTTAGATTTTATTTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCTAATGAAGTGTAAATTTCTAGATTTTTAGATTTTATTTGTGTG  400

seq1  TGTATGTGTGTGTTTGTGTAGACATATGTGTGCAGTACCTGTAAAAGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGTGTGTTTGTGTAGACATATGTGTGCAGTACCTGTAAAAGCCA  450

seq1  TAAGAGGCCATCAGATTCCCTGCAGCTGGATTTACAGGCAGTTGTGAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGCCATCAGATTCCCTGCAGCTGGATTTACAGGCAGTTGTGAGCC  500

seq1  ACCTGATATAGGAGCTGGGAAGTGAACTTCTAGAAGAGCAGCAGGCATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGATATAGGAGCTGGGAAGTGAACTTCTAGAAGAGCAGCAGGCATCT  550

seq1  AGCCATTCCCCAGCCCCAAATTTCTAGACCTTTTTGTGTTCGGGTAAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTCCCCAGCCCCAAATTTCTAGACCTTTTTGTGTTCGGGTAAGCA  600

seq1  TTACCTTTGATAGGAAAAGCTGAATATATGAATTTGGGTGGATCCCTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTTGATAGGAAAAGCTGAATATATGAATTTGGGTGGATCCCTGAA  650

seq1  ATGCACTAAGTGTTTGGGAGTGAGAGAGGA-GGCAGGAATTCCTTTGTGT  699
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATGCACTAAGTGTTTGGGAGTGAGAGAGGAGGGCAGGAATTCCTTTGTGT  700

seq1  C-TTCCTAGA-TTTTTTTTTTCTCCAGTGAATTAGACAGACG-TTTTCCT  746
      | |||||||| ||||||||||||||||||||||||||||||| |||||||
seq2  CTTTCCTAGATTTTTTTTTTTCTCCAGTGAATTAGACAGACGTTTTTCCT  750

seq1  GAGCAGATTAGTAAAACAAGATTCCTCCTGCTGCTTGACATCAGGAAG-T  795
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAGCAGATTAGTAAAACAAGATTCCTCCTGCTGCTTGACATCAGGAAGTT  800

seq1  AGAAGACAGTGTCGGGTGATGTTGTCCACAGCCCTGGATAAAGCAGCAGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACAGTGTCGGGTGATGTTGTCCACAGCCCTGGATAAAGCAGCAGA  850

seq1  GTCAGGCAATTCA-GGCGAGAAGGGAGGTCAGAAGGGG--TGGAGGTCAG  892
      ||||||||||||| | |||||||||||||||| |||||  ||||||||||
seq2  GTCAGGCAATTCATGCCGAGAAGGGAGGTCAGGAGGGGGTTGGAGGTCAG  900

seq1  GATGAGCCAAGTGTCAATC-TGGATGACGAGATGGCGTGTATGTGGCAAA  941
      ||| ||||||||||||||| ||||| ||||||||||||||||||||||||
seq2  GATTAGCCAAGTGTCAATCTTGGAT-ACGAGATGGCGTGTATGTGGCAAA  949

seq1  TTCCACCCCTGTAGATGACTTTCTTCAC  969
       ||||||| |||||| ||||||||||||
seq2  -TCCACCCTTGTAGAGGACTTTCTTCAC  976