BAC Information

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BAC

Clone NameB6Ng01-071N01
Chromosome2 (Build37)7 (Build37)
Map Location 89,371,728 - 89,372,542113,410,016 - 113,410,968
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneOlfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243
Downstream geneOlfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924, Olfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259, Olfr1260, Olfr1261, Olfr1262, Olfr1263, Olfr1264, Olfr1265, Olfr140, Olfr1266-ps1, Olfr1267-ps1, Olfr1268-ps1, Olfr1269, Olfr32, LOC100043090, Olfr1270, LOC627525, LOC100043096, Olfr1506, Olfr142, Olfr1271, Olfr1272, Olfr1273, LOC100042690, LOC100043113, LOC668629, GA_x5J8B7W2BV0-3116-4045, Ptprj, 4933423P22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071N01.bB6Ng01-071N01.g
ACCDH889405DH889406
length9861,131
definitionDH889405|Mus musculus domesticus DNA, BAC clone: B6Ng01-071N01, 5' end.DH889406|Mus musculus domesticus DNA, BAC clone: B6Ng01-071N01, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(89,371,728 - 89,372,542)(113,410,016 - 113,410,968)
sequence
gaattctcttctgaaaaggtttcttttattgaataatctctagggagaaa
agacttggttgatacaacaacaaaattatttaactgccaagtgacataga
ctttactatgaaaagaacaattccaaagtaagactcttaataaactatta
tgagtttttataaatgtattagtataaaatacttagataagacaagtcgt
acatgaaccaaagtaaaaagaaaggcatccctagcctattatcagccaca
taccagcagagaactgctttactctacagtgaaagagactgtccaagaag
ctctgagtccctgcgcaggggaatatatatatacatatacatatatacat
acatacatacatatatatatatatatatatatatatatatatatatatat
aatcagtattcactttacattctgctcactaccccccaattcttccccca
acccacctccccttcttctctaagtgggtgaggattcctgggaatccccc
tacgctgcacatcaagtctacaaggctagtgtcatcttctctcactgaga
ctaaacaagtcagcccagatagaagaacatgtatgtacaggcaacagctt
ttggggtagcccctgctccagttgttcaggacccacgtgaagaccaagct
gcacacctgctacatatgtgcagggagacctagaccaacctgtgtatgtt
ctcttgttggggattcagtctctgaagcacctggggtccagcttagttga
ctctgttggtcttacagtggagttcctatccctttcagacctagaatact
tcctcctattcttttttattacatattttctttatttacatttcaaatgt
tatcccctttcctcatttcccctctaaagatcccttatcccaccccaccc
cctccacctgctcactagttcacccactcctgtttccctgtcctggcatt
cccctacataaaaatgtatatactttggtccttctt
gaattccttgttccaaacagcaattggttattgcagaatattgatatttg
acctattgcataccatcattttaaataaaattgatactcatcctaagata
agttaaaaattgcttatacatgcttttgtatcttcatgcatgcttacatc
ccacttactgtatttaaaaacaacccttctataggagaaaagtatatgta
aattaaatcacatgctaatcctgtttcagcacagataattaaattgtgtg
ctgaagatggtgtttaaaaatgttaaacaatcaaactttaagttgtatat
tactagttaatattatatctcagagcttgcaattgcttatgcaacttata
agaaaaaatactgttcctttaagaaaaatgtttttgggcagttaagaaat
tgtcctaagttgcctggaaaagacccccaggatttgcttttgtgttatag
aggtttacataaagctttaactaataaagattacagatagctcctgaaaa
gatacaaactcaggattcttatatttatttgggttttaaaaggtagttat
ttacagagacaacttaaagactttctctaatttctgattaataaataaat
aaattttacacaagtgactataatgacttttcaagcattctagttacaat
ctctcttcaagagaaacaattgaaagtgcaattagtcactgttaatgtta
tactaaaactgactaacagttcagtatctaaaattttgatgaaatacaag
attgtattttgatgcatgagcaccctttttatattcaacatattagagca
catgcatcatcatctggctcctattcaaagaaaaaattcctaagctgaag
ttagccactgacaagaaagactaaacagataagtcctagctgtttatttt
gtaaatctaaatagtatatatgactgggctgaatagccaccctagaaaca
aatgttctgttcttgttagtcaaagcattcatgacagttttgccatcaga
tgatgtgactcatctgactggccttcttatatctcagacaggcattgtaa
gacgtgccatcacactctcagtctattattaacaaaaggggataagctat
gacgccaaatgacttatccctataatttact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_89371728_89372542
seq2: B6Ng01-071N01.b_43_861

seq1  GAATTCTCTTCTGAAAAGGTTTCTTTTATTGAATAATCTCTAGGGAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTGAAAAGGTTTCTTTTATTGAATAATCTCTAGGGAGAAA  50

seq1  AGACTTGGTTGATACAACAACAAAATTATTTAACTGCCAAGTGACATAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGGTTGATACAACAACAAAATTATTTAACTGCCAAGTGACATAGA  100

seq1  CTTTACTATGAAAAGAACAATTCCAAAGTAAGACTCTTAATAAACTATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTATGAAAAGAACAATTCCAAAGTAAGACTCTTAATAAACTATTA  150

seq1  TGAGTTTTTATAAATGTATTAGTATAAAATACTTAGATAAGACAAGTCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTTATAAATGTATTAGTATAAAATACTTAGATAAGACAAGTCGT  200

seq1  ACATGAACCAAAGTAAAAAGAAAGGCATCCCTAGCCTATTATCAGCCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAACCAAAGTAAAAAGAAAGGCATCCCTAGCCTATTATCAGCCACA  250

seq1  TACCAGCAGAGAACTGCTTTACTCTACAGTGAAAGAGACTGTCCAAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGCAGAGAACTGCTTTACTCTACAGTGAAAGAGACTGTCCAAGAAG  300

seq1  CTCTGAGTCCCTGCGCAGGGGAATATATATATACATATACATATATACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGTCCCTGCGCAGGGGAATATATATATACATATACATATATACAT  350

seq1  ACATACATAC----ATATATATATATATATATATATATATATATATATAT  396
      ||||||||||    ||||||||||||||||||||||||||||||||||||
seq2  ACATACATACATATATATATATATATATATATATATATATATATATATAT  400

seq1  AATCAGTATTCACTTTACATTCTGCTCACTACCCCCCAATTCTTCCCCCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTATTCACTTTACATTCTGCTCACTACCCCCCAATTCTTCCCCCA  450

seq1  ACCCACCTCCCCTTCTTCTCTAAGTGGGTGAGGATTCCTGGGAATCCCCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACCTCCCCTTCTTCTCTAAGTGGGTGAGGATTCCTGGGAATCCCCC  500

seq1  TACGCTGCACATCAAGTCTACAAGGCTAGTGTCATCTTCTCTCACTGAGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCTGCACATCAAGTCTACAAGGCTAGTGTCATCTTCTCTCACTGAGA  550

seq1  CTAAACAAGTCAGCCCAGATAGAAGAACATGTATGTACAGGCAACAGCTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAAGTCAGCCCAGATAGAAGAACATGTATGTACAGGCAACAGCTT  600

seq1  TTGGGGTAGCCCCTGCTCCAGTTGTTCAGGACCCACGTGAAGACCAAGCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGTAGCCCCTGCTCCAGTTGTTCAGGACCCACGTGAAGACCAAGCT  650

seq1  GCACACCTGCTACATATGTGCAGGGAGACCTAGACCAACCTGTGTATGTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACCTGCTACATATGTGCAGGGAGACCTAGACCAACCTGTGTATGTT  700

seq1  CTCTTGTTGGGGATTCAGTCTCTGAAGCACCTGGGGTCCAGCTTAGTTGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTTGGGGATTCAGTCTCTGAAGCACCTGGGGTCCAGCTTAGTTGA  750

seq1  CTCTGTTGGTCTTACAGTGGAGTTCCTATCCCTTTCAGACCTAGAATACT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTGGTCTTACAGTGGAGTTCCTATCCCTTTCAGACCTAGAATACT  800

seq1  TCCTCCTATTCTTTTTTAT  815
      |||||||||||||||||||
seq2  TCCTCCTATTCTTTTTTAT  819

seq1: chr7_113410016_113410968
seq2: B6Ng01-071N01.g_270_1196

seq1  AAATCACATGCTTATCCTGTTTCAGCACAGATAATTAAATTGTGTGCTAA  50
      |||||||||||| ||||||||||||||||||||||||||||||||||| |
seq2  AAATCACATGCTAATCCTGTTTCAGCACAGATAATTAAATTGTGTGCTGA  50

seq1  AGATGGTGTTTAAAAATGTTGAACAATCAAACTTTAAGTTGTATATTAAT  100
      |||||||||||||||||||| ||||||||||||||||||||||||||| |
seq2  AGATGGTGTTTAAAAATGTTAAACAATCAAACTTTAAGTTGTATATTACT  100

seq1  AATCAATATTATATCTCAGAGCTTACAATTGCTTATGCAACTTATAAGAA  150
      | | |||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGTTAATATTATATCTCAGAGCTTGCAATTGCTTATGCAACTTATAAGAA  150

seq1  AAAATACTGTTTCTTTAAGAAAATTGTTTTTGAGCAGCTAAGAAATTGTC  200
      ||||||||||| ||||||||||| |||||||| |||| ||||||||||||
seq2  AAAATACTGTTCCTTTAAGAAAAATGTTTTTGGGCAGTTAAGAAATTGTC  200

seq1  CTAAGTTGCCTGGAAAAGACCCCCAGGATTTGCTTTTGTGTTATAGAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTTGCCTGGAAAAGACCCCCAGGATTTGCTTTTGTGTTATAGAGGT  250

seq1  TTACATAAAGCTTTAGCTAATAAAGATTACAGATAGCTCCTAAAAAGATA  300
      ||||||||||||||| ||||||||||||||||||||||||| ||||||||
seq2  TTACATAAAGCTTTAACTAATAAAGATTACAGATAGCTCCTGAAAAGATA  300

seq1  CAAACTCAGGATTCTTATATTTATTTGGGTTTTAGAAGATAGTTATTTAC  350
      |||||||||||||||||||||||||||||||||| ||| |||||||||||
seq2  CAAACTCAGGATTCTTATATTTATTTGGGTTTTAAAAGGTAGTTATTTAC  350

seq1  AGAGACAACTTAAAGACTTTCTCTAATTTCTGATTAATAAATAAATAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAACTTAAAGACTTTCTCTAATTTCTGATTAATAAATAAATAAAT  400

seq1  TTTACACAAGTGACTATAATGACTTTTCAAGCATTCTAGTTACAATCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACAAGTGACTATAATGACTTTTCAAGCATTCTAGTTACAATCTCT  450

seq1  CTTCAAGAGAAACAATTGAAAGTGTAATTAGTCACTGTTCATGTTATATT  500
      |||||||||||||||||||||||| |||||||||||||| |||||||| |
seq2  CTTCAAGAGAAACAATTGAAAGTGCAATTAGTCACTGTTAATGTTATACT  500

seq1  AAAACTGACTAACAGTTCAGTATCTAAAATTTTGATGAAATTACAAGATT  550
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAAACTGACTAACAGTTCAGTATCTAAAATTTTGATGAAA-TACAAGATT  549

seq1  GTATTTTGATGCGTGAACACCCTTTTTATATTCAACATATTAGAGCACAT  600
      |||||||||||| ||| |||||||||||||||||||||||||||||||||
seq2  GTATTTTGATGCATGAGCACCCTTTTTATATTCAACATATTAGAGCACAT  599

seq1  GCATCATCATCTGGCTCCTATTCAAAGAAAAAATTCCTAAGCTGAAGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATCATCTGGCTCCTATTCAAAGAAAAAATTCCTAAGCTGAAGTTA  649

seq1  GCCACTGACAAGAAAGACTAAACAGATAAGTCCTAGCTGTTTATTTTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGACAAGAAAGACTAAACAGATAAGTCCTAGCTGTTTATTTTGTA  699

seq1  AATCTAAATAGTATATATGACTGGGCTGAATAGCCACCCTAGAAACAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAATAGTATATATGACTGGGCTGAATAGCCACCCTAGAAACAAAT  749

seq1  GTTCTGTTCTTGTTAGTCAAAAGCATTCATGACAGTTTTGCCATCAGATG  800
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTTCTGTTCTTGTTAGTC-AAAGCATTCATGACAGTTTTGCCATCAGATG  798

seq1  AATGTGACTCATCTGACTGGCCTTCCTTATAATCCTCAAGGACAAGACAT  850
       ||||||||||||||||||||||| ||||||   ||||  ||| || |||
seq2  -ATGTGACTCATCTGACTGGCCTT-CTTATA--TCTCA--GAC-AGGCAT  841

seq1  TGTAAAACGTGCCCATCGCACTCTCAAGTCCTATTTAATTAAACAAAAAG  900
      ||||| ||||| ||||| ||||||| ||| |||||  ||| |||||||  
seq2  TGTAAGACGTG-CCATCACACTCTC-AGT-CTATT--ATT-AACAAAA--  883

seq1  GGGGGATAAAGGCTATGACGCCAAAGATGACTCTATCCCTTATAATATTT  950
       ||||||||  |||||||||||||  |||||| |||||| ||||  ||||
seq2  -GGGGATAA--GCTATGACGCCAA--ATGACT-TATCCC-TATA--ATTT  924

seq1  ACT  953
      |||
seq2  ACT  927