BAC Information

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BAC

Clone NameB6Ng01-072F02
ChromosomeY (Build37)7 (Build37)
Map Location 1,479,292 - 1,479,34719,681,127 - 19,681,922
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneUty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2
Downstream geneUbe1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072F02.bB6Ng01-072F02.g
ACCDH889769DH889770
length487796
definitionDH889769|Mus musculus domesticus DNA, BAC clone: B6Ng01-072F02, 5' end.DH889770|Mus musculus domesticus DNA, BAC clone: B6Ng01-072F02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(1,479,292 - 1,479,347)(19,681,127 - 19,681,922)
sequence
actatactgctaaactggctgtgaacatgcggtcttctgcctggactcct
cagtgttgctagaactgcaggcttgaaccaccaaatccatactaactttt
gtagaatactatgaaaacaccacgaccaaaagcaacttggggaggaaagg
gtttatctggcttgtacttccacagccctgtgcatcatcaaaggaagtca
agacaggaactcaagttgagtcagaaactgatgcagagagcatggagggg
tgctgcttccctggcctgctcaacctagaccaccagcccaaagattgcca
cgcccacaacgggctgggctctcccacatcaatcactgatttataaaatt
ctctacagtcttgcctgcagcctgaccttatggaggacgaattttcttaa
ttgtggttccctcctctcagattctttcaaggcaggtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtctgtcagtctgtgagtgtgt
gaattcttggcctcactgaccccttggagactgggctgtggttgaggggc
acttcctcctgtgagtagcaagggccccaagctggagttctctcctaggg
ccaagctattgataatgactgggctaccattgaggagcactgctggggga
ctgctggcggccaggaagctcccattcactaggatagaggaggaggcagg
gcacgttgcaggagaggtggcccccgccaggaagatggaactctgggcgg
gggcctcagcagccatggaggccacacccctctccaggtcctctggactg
cggctggactcatcctccgtagtggggttcccatcagactcgctggaagg
aaaaagggttacgtcttttttaggtttgaaggtttcatcgccctaggggc
agaggcaacccaagctccgattaactattttagcccttcaaagaacccac
ccaaatcccagggtctctacaagcctgctggggttgacagcgcggcgggt
atgctaagctggaggaaagttttccagtcgccttggcctgcagccgagca
cccagactgccccaagtcccctgggtcggcaggcgcgtggctgcggagtg
aggcagcagcttttactccagttcttcctcaccccccacccccacggcgt
cagagaccagagctagaggcctggcgctgaggtgggaggggaagggcttg
ggttacagggaaaccggagccggagaaggttcacgtttcacaacaaagac
aagcgacagaccacgctgtttgggctggagggggcgtgggggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1479292_1479347
seq2: B6Ng01-072F02.b_483_534

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTCTGTGTGTCT  50
      ||||||||||||||||||||||||||||||||||||  ||||||| || |
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCAGTCTGTGAGTGT  50

seq1  GTGTGT  56
      ||    
seq2  GT----  52

seq1: chr7_19681127_19681922
seq2: B6Ng01-072F02.g_67_862 (reverse)

seq1  CCCACCCCCACGCCCCCTCCAGCCCAAACAGCGTGGTCTGTCGCTTGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCCACGCCCCCTCCAGCCCAAACAGCGTGGTCTGTCGCTTGTCT  50

seq1  TTGTTGTGAAACGTGAACCTTCTCCGGCTCCGGTTTCCCTGTAACCCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTGAAACGTGAACCTTCTCCGGCTCCGGTTTCCCTGTAACCCAAG  100

seq1  CCCTTCCCCTCCCACCTCAGCGCCAGGCCTCTAGCTCTGGTCTCTGACGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCCCTCCCACCTCAGCGCCAGGCCTCTAGCTCTGGTCTCTGACGC  150

seq1  CGTGGGGGTGGGGGGTGAGGAAGAACTGGAGTAAAAGCTGCTGCCTCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGGGGTGGGGGGTGAGGAAGAACTGGAGTAAAAGCTGCTGCCTCACT  200

seq1  CCGCAGCCACGCGCCTGCCGACCCAGGGGACTTGGGGCAGTCTGGGTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAGCCACGCGCCTGCCGACCCAGGGGACTTGGGGCAGTCTGGGTGCT  250

seq1  CGGCTGCAGGCCAAGGCGACTGGAAAACTTTCCTCCAGCTTAGCATACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTGCAGGCCAAGGCGACTGGAAAACTTTCCTCCAGCTTAGCATACCC  300

seq1  GCCGCGCTGTCAACCCCAGCAGGCTTGTAGAGACCCTGGGATTTGGGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCGCTGTCAACCCCAGCAGGCTTGTAGAGACCCTGGGATTTGGGTGG  350

seq1  GTTCTTTGAAGGGCTAAAATAGTTAATCGGAGCTTGGGTTGCCTCTGCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTGAAGGGCTAAAATAGTTAATCGGAGCTTGGGTTGCCTCTGCCC  400

seq1  CTAGGGCGATGAAACCTTCAAACCTAAAAAAGACGTAACCCTTTTTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGCGATGAAACCTTCAAACCTAAAAAAGACGTAACCCTTTTTCCTT  450

seq1  CCAGCGAGTCTGATGGGAACCCCACTACGGAGGATGAGTCCAGCCGCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCGAGTCTGATGGGAACCCCACTACGGAGGATGAGTCCAGCCGCAGT  500

seq1  CCAGAGGACCTGGAGAGGGGTGTGGCCTCCATGGCTGCTGAGGCCCCCGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGACCTGGAGAGGGGTGTGGCCTCCATGGCTGCTGAGGCCCCCGC  550

seq1  CCAGAGTTCCATCTTCCTGGCGGGGGCCACCTCTCCTGCAACGTGCCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTTCCATCTTCCTGGCGGGGGCCACCTCTCCTGCAACGTGCCCTG  600

seq1  CCTCCTCCTCTATCCTAGTGAATGGGAGCTTCCTGGCCGCCAGCAGTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTCTATCCTAGTGAATGGGAGCTTCCTGGCCGCCAGCAGTCCC  650

seq1  CCAGCAGTGCTCCTCAATGGTAGCCCAGTCATTATCAATAGCTTGGCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGTGCTCCTCAATGGTAGCCCAGTCATTATCAATAGCTTGGCCCT  700

seq1  AGGAGAGAACTCCAGCTTGGGGCCCTTGCTACTCACAGGAGGAAGTGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGAACTCCAGCTTGGGGCCCTTGCTACTCACAGGAGGAAGTGCCC  750

seq1  CTCAACCACAGCCCAGTCTCCAAGGGGTCAGTGAGGCCAAGAATTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACCACAGCCCAGTCTCCAAGGGGTCAGTGAGGCCAAGAATTC  796