BAC Information

Click to search

BAC

Clone NameB6Ng01-072G18
Chromosome7 (Build37)
Map Location 125,660,395 - 125,836,255
singlet/doubletdoublet
Overlap geneCoq7, Tmc7, B230311B06Rik, Tmc5, Mir16
Upstream geneXylt1, LOC669758, Rps15a, Arl6ip1, 2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik
Downstream gene6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b, Gpr139, LOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072G18.bB6Ng01-072G18.g
ACCDH889845DH889846
length1,1651,017
definitionDH889845|Mus musculus domesticus DNA, BAC clone: B6Ng01-072G18, 5' end.DH889846|Mus musculus domesticus DNA, BAC clone: B6Ng01-072G18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,835,076 - 125,836,255)(125,660,395 - 125,661,417)
sequence
gaattcaaggccagcatggtctacggagtgagttccaggacagctcgggc
tatacagagaaaccctgtctcgaaaaaccaaaaaacaaaaagaaaacaaa
aaacaaacaaacaaaaaatgtccacaacaggagcaggacagtgcatgcca
gtgcagaccttcccagggcgtcggcggtcctggggcttacagacatgttt
ccacaggctccccaggcttatctgagcacagaggcctttggagtatgtga
tgctctgccctctctccagtctccttacagcccctcttctttcttcctcc
cttctccttcccctccccacagctctgcagtcctgccataaacagggttg
aaattaaccagcatctcttgaaatgatcctggctctaccctcattgagtt
ctgaattaacatgctatttgattaattcaattaaaagcttatcttcatag
cgttattaaagtgtggctttgaaagttgggcatggtggagagcacatctg
tagcccccagctttcaggagcccaaggcaggaggcttggtgtggttggcc
agcctgaactacagaagaccctatctccagaaacccagacaaacaaacaa
atacaacttgaccctgtggttggcattttctctccctctcacttgctgtg
tgtttctgactacacctagggagggcctcatgcctgccaccacgctgagg
ctgggctccctcggcagccaggttctctctgtttgatagggcagttcctg
taggactgtgaggaagaggccctcaattgtagtgggcgttgcatacctac
atctactttgtttctcaaaggacttgtgagagatggcaaacgtggtcgct
atggggccctcatcaatgaatatttggtaaatctaaaatttttagaaatt
atagacttaagagatgatcattttcttttccaaattccttttagatgaga
caaacggatcagaaggtatcacagccctactcacaggccttggagcctga
gcacactggagatgggagcctcgctacagcgtcttttggaagcagtctgt
gtttgtggtgttggacatcttgctgactggagcatgcacaatgtcttggg
gtactgtgtggaattcagcttcttatgcagaaggattttgtctccggtaa
gtagaagttttgtct
gaattcacatttaaacattattttatttcacggcctttggacaaagtgta
cccttaactttattcttttaatggccacatggccttatttacacacacac
acatacatacacacacacacacatacacacacacacacacgtacatacac
agacacacacacacagacacacacagacacacacacagacacatacatac
atacacacagacacacagacacatacacacagacacacacatacacacac
acacagacacacacacagacacacacacacacacacacacacacacacac
cccgcatcagcaagtaagcatgagaagctgaatatcaacagaatttttca
tcttgggaggaagctatttcagagttaggctctgaaaataacaaacaaaa
gattcacgaacccccgccccaagcaagtgggggtggggaggcaggccact
caccattgtccctgcccggtgaagacatatagcttggaatgtgtttccag
ctgttgaggcactgaaagtgctggagaaaaattgcaaaaacaggtccctt
cttatcagaaactgggaagtcggacagtggggaccttgcctctgccaaga
acgcatgctacaagacagagggaatacgtccatggagggcagcctgcagc
agtcctggaattaacttacttctcaatatggcctgcactttctgagctcc
catgtggggtttaaaagatatacagcccctaggcctgaccttgggagtct
ctgcttcagtaggtagagtagagtctgtagagttgcctgttgattctgat
atgccggctcagttaaaaaattaaatcaaaagccaaatatgagcctgtga
atgttctgtgtaatccctaggagagaataaatttttatattgtagatgtg
acagtaatattgattgtcaatatcttccaaatcacggaggagacaaggct
ctaggcatgcttgtatggtgtaggagtttctaattggttagcctctgggc
atgcttacgagggagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_125835076_125836255
seq2: B6Ng01-072G18.b_46_1210 (reverse)

seq1  AGACAAAAACTTCTAACTTACGGGGAGACAAAATCCTTCTGCATGAGGAA  50
      |||| ||||||||| ||||||  ||||||||||||||||||||| ||  |
seq2  AGAC-AAAACTTCT-ACTTAC-CGGAGACAAAATCCTTCTGCATAAG--A  45

seq1  GGCTGAAATCCCACACAGGTACCACAAGACATTGTGCATGCTCCAGTCCA  100
       |||| ||| ||||||| ||||| ||||||||||||||||||||||| ||
seq2  AGCTG-AATTCCACACA-GTACCCCAAGACATTGTGCATGCTCCAGT-CA  92

seq1  GCAAGATGTCCAACACCACAAACACAGACTGCTTCCAAAAGACGCTGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGATGTCCAACACCACAAACACAGACTGCTTCCAAAAGACGCTGTAG  142

seq1  CGAGGCTTCCCATCTCCAGTGTGGCTCAGGCTCCAAGGCCTGTGAGTTAG  200
      |||||| ||||||||||||||| ||||||||||||||||||||||| |||
seq2  CGAGGC-TCCCATCTCCAGTGT-GCTCAGGCTCCAAGGCCTGTGAG-TAG  189

seq1  GGCTGTGATTACCTTCTGATCCGTTTGTCTCATCTGAAAAGGAATTTTGG  250
      |||||||| |||||||||||||||||||||||||| |||||||| |||||
seq2  GGCTGTGA-TACCTTCTGATCCGTTTGTCTCATCT-AAAAGGAA-TTTGG  236

seq1  AAAAGAAAATGATCATCTCTTAAGTCTATAATTTCTAAAAATTTTAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAATGATCATCTCTTAAGTCTATAATTTCTAAAAATTTTAGATT  286

seq1  TACCAAATATTCATTTGATGAGGGCCCCATAGCGACCACGTTTGCCATCT  350
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TACCAAATATTCA-TTGATGAGGGCCCCATAGCGACCACGTTTGCCATCT  335

seq1  CTCACAAGTCCTTTGAGAAACAAAGTAGATGTAGGTATGCAACGCCCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAAGTCCTTTGAGAAACAAAGTAGATGTAGGTATGCAACGCCCACT  385

seq1  ACAATTGAGGGCCTCTTCCTCACAGTCCTACAGGAACTGCCCTATCAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTGAGGGCCTCTTCCTCACAGTCCTACAGGAACTGCCCTATCAAAC  435

seq1  AGAGAGAACCTGGCTGCCGAGGGAGCCCAGCCTCAGCGTGGTGGCAGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAACCTGGCTGCCGAGGGAGCCCAGCCTCAGCGTGGTGGCAGGCA  485

seq1  TGAGGCCCTCCCTAGGTGTAGTCAGAAACACACAGCAAGTGAGAGGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCCTCCCTAGGTGTAGTCAGAAACACACAGCAAGTGAGAGGGAGA  535

seq1  GAAAATGCCAACCACAGGGTCAAGTTGTATTTGTTTGTTTGTCTGGGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGCCAACCACAGGGTCAAGTTGTATTTGTTTGTTTGTCTGGGTTT  585

seq1  CTGGAGATAGGGTCTTCTGTAGTTCAGGCTGGCCAACCACACCAAGCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGATAGGGTCTTCTGTAGTTCAGGCTGGCCAACCACACCAAGCCTC  635

seq1  CTGCCTTGGGCTCCTGAAAGCTGGGGGCTACAGATGTGCTCTCCACCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTGGGCTCCTGAAAGCTGGGGGCTACAGATGTGCTCTCCACCATG  685

seq1  CCCAACTTTCAAAGCCACACTTTAATAACGCTATGAAGATAAGCTTTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTTTCAAAGCCACACTTTAATAACGCTATGAAGATAAGCTTTTAA  735

seq1  TTGAATTAATCAAATAGCATGTTAATTCAGAACTCAATGAGGGTAGAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTAATCAAATAGCATGTTAATTCAGAACTCAATGAGGGTAGAGCC  785

seq1  AGGATCATTTCAAGAGATGCTGGTTAATTTCAACCCTGTTTATGGCAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCATTTCAAGAGATGCTGGTTAATTTCAACCCTGTTTATGGCAGGA  835

seq1  CTGCAGAGCTGTGGGGAGGGGAAGGAGAAGGGAGGAAGAAAGAAGAGGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGAGCTGTGGGGAGGGGAAGGAGAAGGGAGGAAGAAAGAAGAGGGG  885

seq1  CTGTAAGGAGACTGGAGAGAGGGCAGAGCATCACATACTCCAAAGGCCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGGAGACTGGAGAGAGGGCAGAGCATCACATACTCCAAAGGCCTC  935

seq1  TGTGCTCAGATAAGCCTGGGGAGCCTGTGGAAACATGTCTGTAAGCCCCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCAGATAAGCCTGGGGAGCCTGTGGAAACATGTCTGTAAGCCCCA  985

seq1  GGACCGCCGACGCCCTGGGAAGGTCTGCACTGGCATGCACTGTCCTGCTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCGCCGACGCCCTGGGAAGGTCTGCACTGGCATGCACTGTCCTGCTC  1035

seq1  CTGTTGTGGACATTTTTTGTTTGTTTGTTTTTTGTTTTCTTTTTGTTTTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTGGACATTTTTTGTTTGTTTGTTTTTTGTTTTCTTTTTGTTTTT  1085

seq1  TGGTTTTTCGAGACAGGGTTTCTCTGTATAGCCCGAGCTGTCCTGGAACT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTCGAGACAGGGTTTCTCTGTATAGCCCGAGCTGTCCTGGAACT  1135

seq1  CACTCCGTAGACCATGCTGGCCTTGAATTC  1180
      ||||||||||||||||||||||||||||||
seq2  CACTCCGTAGACCATGCTGGCCTTGAATTC  1165

seq1: chr7_125660395_125661417
seq2: B6Ng01-072G18.g_67_1083

seq1  GAATTCACATTCAAACATTATTTTATTTCACGGCCTTTGGACAAAGTGTA  50
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTTAAACATTATTTTATTTCACGGCCTTTGGACAAAGTGTA  50

seq1  CCCTTAACTTTATTCTTTTAATGGCCACATGGCCTTATTTACACACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAACTTTATTCTTTTAATGGCCACATGGCCTTATTTACACACACAC  100

seq1  ACATACATACACACACACACACATACACACACACACACACGTACATACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATACACACACACACACATACACACACACACACACGTACATACAC  150

seq1  AGACACACACACACAGACACACACAGACACACACACAGACACATACATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACACACACAGACACACACAGACACACACACAGACACATACATAC  200

seq1  ATACACACAGACACACAGACACATACACACAGACACACACATACACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACAGACACACAGACACATACACACAGACACACACATACACACAC  250

seq1  ACACAGACACACACACAGACACACACACACACACACACACACACACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACACACACACAGACACACACACACACACACACACACACACACAC  300

seq1  CCCGCATCAGCAAGTAAGCATGAGAAGCTGAATATCAACAGAATTTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCATCAGCAAGTAAGCATGAGAAGCTGAATATCAACAGAATTTTTCA  350

seq1  TCTTGGGAGGAAGCTATTTCAGAGTTAGGCTCTGAAAATAACAAACAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGAGGAAGCTATTTCAGAGTTAGGCTCTGAAAATAACAAACAAAA  400

seq1  GATTCACGAACCCCCGCCCCAAGCAAGTGGGGGTGGGGAGGCAGGCCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCACGAACCCCCGCCCCAAGCAAGTGGGGGTGGGGAGGCAGGCCACT  450

seq1  CACCATTGTCCCTGCCCGGTGAAGACATATAGCTTGGAATGTGTTTCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTGTCCCTGCCCGGTGAAGACATATAGCTTGGAATGTGTTTCCAG  500

seq1  CTGTTGAGGCACTGAAAGGGCTGGAGAAAAATTGCAAAAACAGGTCCCTT  550
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTGTTGAGGCACTGAAAGTGCTGGAGAAAAATTGCAAAAACAGGTCCCTT  550

seq1  CTTATCAGAAACTGGGAAGTCGGACAGTGGGGACCTTGCCTCTGCCAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCAGAAACTGGGAAGTCGGACAGTGGGGACCTTGCCTCTGCCAAGA  600

seq1  ACGCAGGCTACAAGACAGAGGGAATACGTCCATGGAGGGCAGCCTGCAGC  650
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCATGCTACAAGACAGAGGGAATACGTCCATGGAGGGCAGCCTGCAGC  650

seq1  AGTCCTGGAATTAACTTACTTCTCAATATGGCCTGCAC-TTCTGAGCTCC  699
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGTCCTGGAATTAACTTACTTCTCAATATGGCCTGCACTTTCTGAGCTCC  700

seq1  CATGTGGGGTTTAAAAGATATACAGCCCCTAGGCCTGACC-TGGGAGTCT  748
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CATGTGGGGTTTAAAAGATATACAGCCCCTAGGCCTGACCTTGGGAGTCT  750

seq1  CTGCTTCAGTAGGTAGAGTAGAGTCTGTAGAGTTTGCCTGTTGATTCTGA  798
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTGCTTCAGTAGGTAGAGTAGAGTCTGTAGAG-TTGCCTGTTGATTCTGA  799

seq1  TATGCCGGCTCAGTTAAAAAATAAAATCAAAAGCCAAAGATGAAGCCTGT  848
      |||||||||||||||||||||| ||||||||||||||| ||| |||||||
seq2  TATGCCGGCTCAGTTAAAAAATTAAATCAAAAGCCAAATATG-AGCCTGT  848

seq1  GAATGTTCTGTGTAATCCCTAGGAAGAGAAATAGACTTTTATA-TGTAGA  897
      ||||||||||||||||||||||| |||| |||| | ||||||| ||||||
seq2  GAATGTTCTGTGTAATCCCTAGG-AGAG-AATAAATTTTTATATTGTAGA  896

seq1  TGTGACAGTTAATATTGATTGTCAATAGCTTCCAGAATCACGGAGGAGAC  947
      |||||||| |||||||||||||||||| |||||| |||||||||||||||
seq2  TGTGACAG-TAATATTGATTGTCAATATCTTCCA-AATCACGGAGGAGAC  944

seq1  AAGGCTCTAGGCATGCTTGTATGGTTGAGGGAGTTTCTAGATTGGGTTAG  997
      |||||||||||||||||||||||| ||  |||||||||| ||| ||||||
seq2  AAGGCTCTAGGCATGCTTGTATGG-TGTAGGAGTTTCTA-ATT-GGTTAG  991

seq1  CCTCTGGGCATGCTTACGAGGGAGCC  1023
      ||||||||||||||||||||||||||
seq2  CCTCTGGGCATGCTTACGAGGGAGCC  1017