BAC Information

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BAC

Clone NameB6Ng01-073B07
Chromosome7 (Build37)
Map Location 121,034,707 - 121,142,875
singlet/doubletdoublet
Overlap geneSpon1
Upstream geneTead1, 4632411J06Rik, LOC434227, Arntl, A630005I04Rik, Btbd10, Pth, LOC100042736, Mlstd2, EG434228
Downstream geneRras2, LOC668451, Copb1, Psma1, 4933406I18Rik, Pde3b, Cyp2r1, Calca, LOC100043295, Calcb, Insc, EG627967
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073B07.bB6Ng01-073B07.g
ACCDH890315DH890316
length1,1711,083
definitionDH890315|Mus musculus domesticus DNA, BAC clone: B6Ng01-073B07, 5' end.DH890316|Mus musculus domesticus DNA, BAC clone: B6Ng01-073B07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,034,707 - 121,035,894)(121,141,775 - 121,142,875)
sequence
gaattcttcccaaaattcttcccctctcagtgaagaagctcttgagatac
attttaaggttagaccatgtaagttttgcctcccaattctggaagcgaaa
aggtcttgacacataagaaagtagcattacacaatcagatggccagagaa
gatatgaaccaaaatcaaagcttggaccagataattctccgtttccttcc
cttggggtctgttatgaagcagtcaatagttggagaatgtctgaaccaaa
accaaggctgagatccaagaggtttccttttgccttcccttgggggctgt
catgaggggaatcactcctctgtcctccgcagtcaaattaaacatcaaat
tcacaaagcatcatccaacgtgaagtccattgatactaaattctatgcta
ttccacctactgttctgcagacagccagacttagaagccagagagagcgt
tccaggtatgttgcgcttgaatgcattgctgaaacctacttcaagctcca
tggtgtctgtcctaggcattgctagactgccactcccaactgtggggacc
atgggcggtactgcttcccaggaacaaggtggccaggcccataaggatgt
cttgagggccagacacgtgcccagtcttcatggagcttcataagatgcta
aacatctactatcactagctctcataggaatctgggttcttgacaaatgc
tttcatcctgtagacagcttgtcatctcctaatgacttcctccactttgg
acataacatcatttaatactatttgacaagtaaatattgaagaatatttt
cctatatccagtttttaatttgatgacacattggctaaaatattaatatg
gccaatgggaaatacatcctatatatttgaagttaattttgcaatgacat
tcagccatcttctccattgggtcacttgctttaaaaataaaaaatgttca
tgggacctggagagatggctcaatggttaagagtactgtctgttcttcca
gagacctaggttaatgccagcacacactcagtagttcacaactatcagta
aattcagttctaaggcaccgggcaccctcatgcatacatgcagcaaacca
tgcaataaataaaaatactattatttcatcccatagaataccaactatgc
tacctgatgacttaatttttt
gaattctttgttcagttctgagccccattttttaatggggtgttttctga
gtcttaactgtaggggttgtattgtaagtacatttatctggggtgagcac
cctacggtcagttaatctctgcattttgacctcttgtggctttctataat
gttctccatctgctgcaagcagaagactgtaatcaagataccttctctta
agggctggagagatggatcaggtaagagctctggctgctcttataaaaga
cccaggtttggttcccagaactcatatggcggctttgccactataactcc
agttctggggtttctgatgccttcctctggtctctgtaagcactgtgtgt
acatatatgtatgcattaaaaaagtgacggctaaatggtttgtaagaatc
atcacagtctttatatcatctgaagttctttcaaaacttcacacatttca
acattttccacaactgcagcaccttcaactgcttaaattcactcactcat
tcattcatttgcttttttttattattcttccatagcccaggctgcatatg
atgatatttttatcaactagacatttccctgatacaatgttttcttttct
ttgaaaggaagatattgataattccatcatctctaactattgggcaattt
tcctctactcaaagtttcctgaaatataaatcatggaaataatccatgct
ccaagctataacaataaaagtaactattaattttcaggattgttcacaca
tttctgtcttccttagttctgtgtgaagcaagggggacagaagaaatagc
ttagaggtttaaagttagatcccatcaataattttttcccatttgtaatt
cagttgaatatttcttaagcagtcagtcaaggattgctgtttcgatggaa
actgtgtatgaccatttttaaaatagatttttttccttattgtaaagtgt
gtcatgtaaatattcagaaatagactaagcaaagaaatactatcaaacag
tttataccccaccatctacaggatagccacagtgtgtttatatttagcca
aagaaaaagaaagcacatggtgagtgtgacatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_121034707_121035894
seq2: B6Ng01-073B07.b_44_1214

seq1  GAATTCTTCCCAAAATTCTTCCCCTCTCAGTGAAGAAGCTCTTGAGATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCCAAAATTCTTCCCCTCTCAGTGAAGAAGCTCTTGAGATAC  50

seq1  ATTTTAAGGTTAGACCATGTAAGTTTTGCCTCCCAATTCTGGAAGCGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAGGTTAGACCATGTAAGTTTTGCCTCCCAATTCTGGAAGCGAAA  100

seq1  AGGTCTTGACACATAAGAAAGTAGCATTACACAATCAGATGGCCAGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTGACACATAAGAAAGTAGCATTACACAATCAGATGGCCAGAGAA  150

seq1  GATATGAACCAAAATCAAAGCTTGGACCAGATAATTCTCCGTTTCCTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGAACCAAAATCAAAGCTTGGACCAGATAATTCTCCGTTTCCTTCC  200

seq1  CTTGGGGTCTGTTATGAAGCAGTCAATAGTTGGAGAATGTCTGAACCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGGTCTGTTATGAAGCAGTCAATAGTTGGAGAATGTCTGAACCAAA  250

seq1  ACCAAGGCTGAGATCCAAGAGGTTTCCTTTTGCCTTCCCTTGGGGGCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGCTGAGATCCAAGAGGTTTCCTTTTGCCTTCCCTTGGGGGCTGT  300

seq1  CATGAGGGGAATCACTCCTCTGTCCTCCGCAGTCAAATTAAACATCAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGGGAATCACTCCTCTGTCCTCCGCAGTCAAATTAAACATCAAAT  350

seq1  TCACAAAGCATCATCCAACGTGAAGTCCATTGATACTAAATTCTATGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAGCATCATCCAACGTGAAGTCCATTGATACTAAATTCTATGCTA  400

seq1  TTCCACCTACTGTTCTGCAGACAGCCAGACTTAGAAGCCAGAGAGAGCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCTACTGTTCTGCAGACAGCCAGACTTAGAAGCCAGAGAGAGCGT  450

seq1  TCCAGGTATGTTGCGCTTGAATGCATTGCTGAAACCTACTTCAAGCTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTATGTTGCGCTTGAATGCATTGCTGAAACCTACTTCAAGCTCCA  500

seq1  TGGTGTCTGTCCTAGGCATTGCTAGACTGCCACTCCCAACTGTGGGGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTCTGTCCTAGGCATTGCTAGACTGCCACTCCCAACTGTGGGGACC  550

seq1  ATGGGCGGTACTGCTTCCCAGGAACAAGGTGGCCAGGCCCATAAGGATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCGGTACTGCTTCCCAGGAACAAGGTGGCCAGGCCCATAAGGATGT  600

seq1  CTTGAGGGCCAGACACGTGCCCAGTCTTCATGGAGCTTCATAAGATGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGGCCAGACACGTGCCCAGTCTTCATGGAGCTTCATAAGATGCTA  650

seq1  AACATCTACTATCACTAGCTCTCATAGGAATCTGGGTTCTTGACAAATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTACTATCACTAGCTCTCATAGGAATCTGGGTTCTTGACAAATGC  700

seq1  TTTCATCCTGTAGACAGCTTGTCATCTCCTAATGACTTCCTCCACTTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCCTGTAGACAGCTTGTCATCTCCTAATGACTTCCTCCACTTTGG  750

seq1  ACATAACATCATTTAATACTATTTGACAAGTAAATATTGAAGAATATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACATCATTTAATACTATTTGACAAGTAAATATTGAAGAATATTTT  800

seq1  CCTATATCCAGTTTTTAATTTGATGACACATTGGCTAAAATATTAATATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATATCCAGTTTTTAATTTGATGACACATTGGCTAAAATATTAATATG  850

seq1  GCCAATGGGAAATACATCCTATATATTTGAAGTTAATTTTGCAATGACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATGGGAAATACATCCTATATATTTGAAGTTAATTTTGCAATGACAT  900

seq1  TCAGCCATCTTCTCCATTGGGTCACTTGCTTTAAAAAATAAAAAATGTTC  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCAGCCATCTTCTCCATTGGGTCACTTGCTTT-AAAAATAAAAAATGTTC  949

seq1  ATGGGACCTGGAGAGATGGCTCAATGGTTAAGAGTACTGTCTGTTCTTCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGACCTGGAGAGATGGCTCAATGGTTAAGAGTACTGTCTGTTCTTCC  999

seq1  AGAGGACCTAGGTTAATGCCAGCACACACTCAGTAGTTCACAACTATCAG  1050
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGA-GACCTAGGTTAATGCCAGCACACACTCAGTAGTTCACAACTATCAG  1048

seq1  TAATTTCAGTTCTAGGGCACCGGGCACCCTCATGCATACATGCAGGCAAA  1100
      ||| |||||||||| ||||||||||||||||||||||||||||| |||||
seq2  TAAATTCAGTTCTAAGGCACCGGGCACCCTCATGCATACATGCA-GCAAA  1097

seq1  ACACCAATGCACATAAAATAAAAATACATATTATTTCCAATCCCATAAGA  1150
          | ||||| || |||||||||||| |||||||||  ||||||| |||
seq2  ----CCATGCA-AT-AAATAAAAATAC-TATTATTTC--ATCCCAT-AGA  1137

seq1  ATTACCAAACTAGTGCTAACTTGATGACTTAATATTTT  1188
      | |||| ||||| |||| || |||||||||||| ||||
seq2  A-TACC-AACTA-TGCT-ACCTGATGACTTAATTTTTT  1171

seq1: chr7_121141775_121142875
seq2: B6Ng01-073B07.g_66_1148 (reverse)

seq1  AATGTCACACTCACCAATGTGCCTTTTTCTTTTTTTCTTTTGGCTTAAAA  50
      ||||||||||||||| ||||||   |||||||||    |||||||  |||
seq2  AATGTCACACTCACC-ATGTGC---TTTCTTTTT---CTTTGGCT--AAA  41

seq1  TATAAAACACAACTGTGGCTAT-CTGTAGATGGTGGGGTTATAAACTGTT  99
      ||| |||||| ||||||||||| ||||||||||||||| ||||||||| |
seq2  TAT-AAACAC-ACTGTGGCTATCCTGTAGATGGTGGGG-TATAAACTG-T  87

seq1  TTGATAGTATTTCTTTTGCCTAGTTCTATTTTCTGAATATTTTACAATGA  149
      ||||||||||||| ||||| ||| |||| |||||||||| ||||| ||| 
seq2  TTGATAGTATTTC-TTTGCTTAG-TCTA-TTTCTGAATA-TTTAC-ATG-  131

seq1  ACACACTTTACAATAAGGAAAAAAATCTATTTTAAAAATGGTCATACACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTTTACAATAAGGAAAAAAATCTATTTTAAAAATGGTCATACACA  181

seq1  GTTTCCATCGAAACAGCAATCCTTGACTGACTGCTTAAGAAATATTCAAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCATCGAAACAGCAATCCTTGACTGACTGCTTAAGAAATATTCAAC  231

seq1  TGAATTACAAATGGGAAAAAATTATTGATGGGATCTAACTTTAAACCTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTACAAATGGGAAAAAATTATTGATGGGATCTAACTTTAAACCTCT  281

seq1  AAGCTATTTCTTCTGTCCCCCTTGCTTCACACAGAACTAAGGAAGACAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATTTCTTCTGTCCCCCTTGCTTCACACAGAACTAAGGAAGACAGA  331

seq1  AATGTGTGAACAATCCTGAAAATTAATAGTTACTTTTATTGTTATAGCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTGAACAATCCTGAAAATTAATAGTTACTTTTATTGTTATAGCTT  381

seq1  GGAGCATGGATTATTTCCATGATTTATATTTCAGGAAACTTTGAGTAGAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCATGGATTATTTCCATGATTTATATTTCAGGAAACTTTGAGTAGAG  431

seq1  GAAAATTGCCCAATAGTTAGAGATGATGGAATTATCAATATCTTCCTTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTGCCCAATAGTTAGAGATGATGGAATTATCAATATCTTCCTTTC  481

seq1  AAAGAAAAGAAAACATTGTATCAGGGAAATGTCTAGTTGATAAAAATATC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAGAAAACATTGTATCAGGGAAATGTCTAGTTGATAAAAATATC  531

seq1  ATCATATGCAGCCTGGGCTATGGAAGAATAATAAAAAAAAGCAAATGAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATGCAGCCTGGGCTATGGAAGAATAATAAAAAAAAGCAAATGAAT  581

seq1  GAATGAGTGAGTGAATTTAAGCAGTTGAAGGTGCTGCAGTTGTGGAAAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGTGAGTGAATTTAAGCAGTTGAAGGTGCTGCAGTTGTGGAAAAT  631

seq1  GTTGAAATGTGTGAAGTTTTGAAAGAACTTCAGATGATATAAAGACTGTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAATGTGTGAAGTTTTGAAAGAACTTCAGATGATATAAAGACTGTG  681

seq1  ATGATTCTTACAAACCATTTAGCCGTCACTTTTTTAATGCATACATATAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCTTACAAACCATTTAGCCGTCACTTTTTTAATGCATACATATAT  731

seq1  GTACACACAGTGCTTACAGAGACCAGAGGAAGGCATCAGAAACCCCAGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACACAGTGCTTACAGAGACCAGAGGAAGGCATCAGAAACCCCAGAA  781

seq1  CTGGAGTTATAGTGGCAAAGCCGCCATATGAGTTCTGGGAACCAAACCTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTTATAGTGGCAAAGCCGCCATATGAGTTCTGGGAACCAAACCTG  831

seq1  GGTCTTTTATAAGAGCAGCCAGAGCTCTTACCTGATCCATCTCTCCAGCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTTTATAAGAGCAGCCAGAGCTCTTACCTGATCCATCTCTCCAGCC  881

seq1  CTTAAGAGAAGGTATCTTGATTACAGTCTTCTGCTTGCAGCAGATGGAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGAGAAGGTATCTTGATTACAGTCTTCTGCTTGCAGCAGATGGAGA  931

seq1  ACATTATAGAAAGCCACAAGAGGTCAAAATGCAGAGATTAACTGACCGTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATAGAAAGCCACAAGAGGTCAAAATGCAGAGATTAACTGACCGTA  981

seq1  GGGTGCTCACCCCAGATAAATGTACTTACAATACAACCCCTACAGTTAAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCTCACCCCAGATAAATGTACTTACAATACAACCCCTACAGTTAAG  1031

seq1  ACTCAGAAAACACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAAAACACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAAT  1081

seq1  TC  1101
      ||
seq2  TC  1083