BAC Information

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BAC

Clone NameB6Ng01-073F04
Chromosome7 (Build37)
Map Location 9,298,038 - 9,433,269
singlet/doubletdoublet
Overlap geneLOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790
Upstream geneLOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781
Downstream geneLOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139, LOC100042894, Vmn2r47
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073F04.bB6Ng01-073F04.g
ACCDH890488DH890489
length1,0971,133
definitionDH890488|Mus musculus domesticus DNA, BAC clone: B6Ng01-073F04, 5' end.DH890489|Mus musculus domesticus DNA, BAC clone: B6Ng01-073F04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,298,038 - 9,299,151)(9,432,113 - 9,433,269)
sequence
gaattcatagactagcaatgaaaatgggtggttttatacagagcatgtga
atatccatcagcataccccttccaatattgaatataaactatccttactc
attaattttctccatgattagaagatgagtttttatttatatttgtcagt
tatatggaaatcatttaaggagtggtctccagtgattctaccaagagtgt
aggctctggagatcattctgggttttctgagagtaactaaacaagaaata
gtgttggtattcagttctgtctgtagaaaagtgtttatatgtgtgaatgt
atgtttctcactgtgtatatatctattttctactctttctgtgtatctgt
gtttatacttgtgatactttcaacatacatgtttatctctatatgaaagt
ggaagtaagcgacaattttttctatgtaggaatttctttctataagtgtg
tttgtttatatatgtgcatatgtttctttgtggttttgtcagagtaggtt
tctttgtgtacattgtgtgtattttgtgagtgtttataagtacttatacg
gatttgtacctgctttgctgtgtatgagtctgcctatttcttcttacttg
gcatggacattgcctgcctttttgtatttaggtttgagtataaatttctc
tatgtgtcaatatcattcatggctggtgcttatatatttatgcctctccc
agtgtttttatgtcaacgtgtgtgtgtgtctgtgtgtgtgtatgtgtgtg
ttgcatagctgtgtttggttctgcttttttctgtgtttggtattcttgac
tgagaggattgaaattcttgaaatattatgataatttcatttatccaatt
gctttgttgtgatttccctcttctgtctttctttctttaaatgtagttgc
ctttgctataaatcagatgcattttatgacttgaaagtatttaaatacat
aatagtacaatgctgtattttaggtaaactctttctaagaaagatcactt
cacttatctcttgggacaagtgattatgaagcaaaagagtaatgcagaga
aatgacattttccatttgggaatctctccaacaccttgggaataagg
gaattccaggtcagccaggactatacaatgaaaccctgtctcaaaaaaaa
aaaaaaaatcaaaacaaaacaaaaacccaaaacaaaaaccaaaaaacaaa
acaaaacgcatcaatgttttttaagagccaaacgataatcagtttatatg
ttcttatagatatgttagtttatattattatattcagactattgtcatgc
ttattgaaaattgttagcctaattttacatcatgaatagagctataaaat
actaatttttatacctttcttatttaaacatgaatcttaatgtgttcatt
tgctgacaattaacatagaagtttgtaacaaaactcaagatcaccattct
ttagagcaccactctactataatgtgaccttgaagggaaaaagtccaata
gggaagtaaaacttaagcataaagcaccacttaagacgacctgataaaaa
ctttgcgatgcttcgggtagagaaagctcagaataagagctcagaatgtc
tggagaaagaatgatgtcaaaagataattccccattcctacattgcctgg
cgtaggtcatgcaatgaagttttaaatgtgcaaaataaagaaagagttag
gatatacaacttgaaaattaaccctgataataaaactaggtttctttttg
cctttagccttctttaaaaagtataccagttgaatgttagaaatataatt
gcattttttttttataaaagtcctactatatatcaggcacaaaggtaaaa
ataataaatttctctatatataaacttgctatttacttactgtttctcca
tataagatattaaagtatactctgataaatgatgcttatatgtccatgca
gtgtgacacatggacacatattaggggtatctaactctcatttatggtca
agtagtacttcctaaatatgttataagaagcacactccaaaaataattat
tttctgagtgatgataggagttgacaaaatccaaagtagggaagatgagc
atcagagtatcagcagttttgagaatataactctatttattagcaacaaa
cgagatggtctcaatccagaacctcaaattctgtctacaatagatgaata
gtcagtccgaagcattgattgtctcatttggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9298038_9299151
seq2: B6Ng01-073F04.b_45_1141

seq1  GAATTCATAGACTAGCAATGAAAATGGGTGGTTTTATACAGAGCATGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGACTAGCAATGAAAATGGGTGGTTTTATACAGAGCATGTGA  50

seq1  ATATCCATCAGCATACCCCTTCCAATATTGAATATAAACTATCCTTACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCATCAGCATACCCCTTCCAATATTGAATATAAACTATCCTTACTC  100

seq1  ATTAATTTTCTCCATGATTAGAAGATGAGTTTTTATTTATATTTGTCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTTCTCCATGATTAGAAGATGAGTTTTTATTTATATTTGTCAGT  150

seq1  TATATGGAAATCATTTAAGGAGTGGTCTCCAGTGATTCTACCAAGAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGAAATCATTTAAGGAGTGGTCTCCAGTGATTCTACCAAGAGTGT  200

seq1  AGGCTCTGGAGATCATTCTGGGTTTTCTGAGAGTAACTAAACAAGAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTGGAGATCATTCTGGGTTTTCTGAGAGTAACTAAACAAGAAATA  250

seq1  GTGTTGGTATTCAGTTCTGTCTGTAGAAAAGTGTTTATATGTGTGAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGGTATTCAGTTCTGTCTGTAGAAAAGTGTTTATATGTGTGAATGT  300

seq1  ATGTTTCTCACTGTGTATATATCTATTTTCTACTCTTTCTGTGTATCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCTCACTGTGTATATATCTATTTTCTACTCTTTCTGTGTATCTGT  350

seq1  GTTTATACTTGTGATACTTTCAACATACATGTTTATCTCTATATGAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATACTTGTGATACTTTCAACATACATGTTTATCTCTATATGAAAGT  400

seq1  GGAAGTAAGCGACAATTTTTTCTATGTAGGAATTTCTTTCTATAAGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTAAGCGACAATTTTTTCTATGTAGGAATTTCTTTCTATAAGTGTG  450

seq1  TTTGTTTATATATGTGCATATGTTTCTTTGTGGTTTTGTCAGAGTAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTATATATGTGCATATGTTTCTTTGTGGTTTTGTCAGAGTAGGTT  500

seq1  TCTTTGTGTACATTGTGTGTATTTTGTGAGTGTTTATAAGTACTTATACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTGTACATTGTGTGTATTTTGTGAGTGTTTATAAGTACTTATACG  550

seq1  GATTTGTACCTGCTTTGCTGTGTATGAGTCTGCCTATTTCTTCTTACTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTACCTGCTTTGCTGTGTATGAGTCTGCCTATTTCTTCTTACTTG  600

seq1  GCATGGACATTGCCTGCCTTTTTGTATTTAGGTTTGAGTATAAATTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGACATTGCCTGCCTTTTTGTATTTAGGTTTGAGTATAAATTTCTC  650

seq1  TATGTGTCAATATCATTCATGGCTGGTGCTTATATATTTATGCCTCTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTCAATATCATTCATGGCTGGTGCTTATATATTTATGCCTCTCCC  700

seq1  AGTGTTTTTATGTCAACGTGTGTGTGTGTCTGTGTGTGTGTATGTGTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTTATGTCAACGTGTGTGTGTGTCTGTGTGTGTGTATGTGTGTG  750

seq1  TTGCATAGCTGTGTTTGGTTCTGCTTTTTTCTGTGTTTGGTATTCTTGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATAGCTGTGTTTGGTTCTGCTTTTTTCTGTGTTTGGTATTCTTGAC  800

seq1  TGAGAGGATTGAAATTCTTGAAATATTATGATAATTTCATTTATCCAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGATTGAAATTCTTGAAATATTATGATAATTTCATTTATCCAATT  850

seq1  GCTTTGTTGTGATTTCCCTCTTTCTGTCTTTCTTTCTTTAAATGTAGTTG  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GCTTTGTTGTGATTTCCCTC-TTCTGTCTTTCTTTCTTTAAATGTAGTTG  899

seq1  CCTTTGCTATAAAATCAGAATGCATTTTATGACTTGAAAGTATTTTAAAT  950
      |||||||||| ||||||| ||||||||||||||||||||||| |||||||
seq2  CCTTTGCTAT-AAATCAG-ATGCATTTTATGACTTGAAAGTA-TTTAAAT  946

seq1  ACATAATAGTACAATGCTTGTATTTTAGGTAAACTCCTTTCTAAGAAAGA  1000
      ||||||||||||||||| ||||||||||||||||| ||||||||||||||
seq2  ACATAATAGTACAATGC-TGTATTTTAGGTAAACT-CTTTCTAAGAAAGA  994

seq1  TCCACTTCACTAATCCTCTTGGGGACAAAGTGATTATGAAACAAAGAGTA  1050
      | ||||||||| || ||||| ||||| ||||||||||||| |||| || |
seq2  T-CACTTCACTTAT-CTCTT-GGGAC-AAGTGATTATGAAGCAAA-AG-A  1038

seq1  ATAATGCAGGAAGAATATGACATTTTCCATTTTGGGAATCTCTCACAACA  1100
       ||||||||  |||| ||||||||||||| |||||||||||||| |||||
seq2  GTAATGCAG--AGAA-ATGACATTTTCCA-TTTGGGAATCTCTC-CAACA  1083

seq1  CCTTGGGATTAAGG  1114
      |||||||| |||||
seq2  CCTTGGGAATAAGG  1097

seq1: chr7_9432113_9433269
seq2: B6Ng01-073F04.g_67_1199 (reverse)

seq1  TCCCAAATGAGACCAACTCATTGCTTCGACTTGACTATTCCATCTATTGT  50
      |||||||||||||  | ||| |||||||   |||||||| ||||||||||
seq2  TCCCAAATGAGAC--AATCAATGCTTCGGACTGACTATT-CATCTATTGT  47

seq1  AGACAGGATTTTTGAGGTTTCTGGGATGAGACCAATTCTCCGTTTTGTTT  100
      |||||| |  ||||||| ||||||  ||||||||  ||| |||||   ||
seq2  AGACAGAA--TTTGAGG-TTCTGGATTGAGACCA--TCT-CGTTT--GTT  89

seq1  GCTAATATATTAGAGTTAATATTCCTCAAAAACTGCTGATACTCCTGGAT  150
      ||||||| | ||||||| ||||| ||| ||||||||||||||| |||   
seq2  GCTAATA-AATAGAGTT-ATATT-CTC-AAAACTGCTGATACT-CTG--A  132

seq1  TGCTCATTCTTTCCCTACTTTGGATTTTTGTCAACTTCCTATCATTCACT  200
      |||||||   |||||||||||||| |||||||||| |||||||| |||||
seq2  TGCTCAT--CTTCCCTACTTTGGA-TTTTGTCAAC-TCCTATCA-TCACT  177

seq1  CAGAAAATAATTATTTTTGGAGTTGTGCTTCTTATAACATATTTAGGAAG  250
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAGAAAATAATTATTTTTGGAG-TGTGCTTCTTATAACATATTTAGGAAG  226

seq1  TACTACTTGACCATAAATGAGAGTTAGATACCCCTAATATGTGTCCATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACTTGACCATAAATGAGAGTTAGATACCCCTAATATGTGTCCATGT  276

seq1  GTCACACTGCATGGACATATAAGCATCATTTATCAGAGTATACTTTAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACACTGCATGGACATATAAGCATCATTTATCAGAGTATACTTTAATA  326

seq1  TCTTATATGGAGAAACAGTAAGTAAATAGCAAGTTTATATATAGAGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATATGGAGAAACAGTAAGTAAATAGCAAGTTTATATATAGAGAAAT  376

seq1  TTATTATTTTTACCTTTGTGCCTGATATATAGTAGGACTTTTATAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTTTTACCTTTGTGCCTGATATATAGTAGGACTTTTATAAAAAA  426

seq1  AAAATGCAATTATATTTCTAACATTCAACTGGTATACTTTTTAAAGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCAATTATATTTCTAACATTCAACTGGTATACTTTTTAAAGAAGG  476

seq1  CTAAAGGCAAAAAGAAACCTAGTTTTATTATCAGGGTTAATTTTCAAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGGCAAAAAGAAACCTAGTTTTATTATCAGGGTTAATTTTCAAGTT  526

seq1  GTATATCCTAACTCTTTCTTTATTTTGCACATTTAAAACTTCATTGCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATCCTAACTCTTTCTTTATTTTGCACATTTAAAACTTCATTGCATG  576

seq1  ACCTACGCCAGGCAATGTAGGAATGGGGAATTATCTTTTGACATCATTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACGCCAGGCAATGTAGGAATGGGGAATTATCTTTTGACATCATTCT  626

seq1  TTCTCCAGACATTCTGAGCTCTTATTCTGAGCTTTCTCTACCCGAAGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAGACATTCTGAGCTCTTATTCTGAGCTTTCTCTACCCGAAGCAT  676

seq1  CGCAAAGTTTTTATCAGGTCGTCTTAAGTGGTGCTTTATGCTTAAGTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAAAGTTTTTATCAGGTCGTCTTAAGTGGTGCTTTATGCTTAAGTTTT  726

seq1  ACTTCCCTATTGGACTTTTTCCCTTCAAGGTCACATTATAGTAGAGTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCTATTGGACTTTTTCCCTTCAAGGTCACATTATAGTAGAGTGGT  776

seq1  GCTCTAAAGAATGGTGATCTTGAGTTTTGTTACAAACTTCTATGTTAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAAAGAATGGTGATCTTGAGTTTTGTTACAAACTTCTATGTTAATT  826

seq1  GTCAGCAAATGAACACATTAAGATTCATGTTTAAATAAGAAAGGTATAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCAAATGAACACATTAAGATTCATGTTTAAATAAGAAAGGTATAAA  876

seq1  AATTAGTATTTTATAGCTCTATTCATGATGTAAAATTAGGCTAACAATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTATTTTATAGCTCTATTCATGATGTAAAATTAGGCTAACAATTT  926

seq1  TCAATAAGCATGACAATAGTCTGAATATAATAATATAAACTAACATATCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAGCATGACAATAGTCTGAATATAATAATATAAACTAACATATCT  976

seq1  ATAAGAACATATAAACTGATTATCGTTTGGCTCTTAAAAAACATTGATGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAACATATAAACTGATTATCGTTTGGCTCTTAAAAAACATTGATGC  1026

seq1  GTTTTGTTTTGTTTTTTGGTTTTTGTTTTGGGTTTTTGTTTTGTTTTGAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTGTTTTTTGGTTTTTGTTTTGGGTTTTTGTTTTGTTTTGAT  1076

seq1  TTTTTTTTTTTTTTTGAGACAGGGTTTCATTGTATAGTCCTGGCTGACCT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTGAGACAGGGTTTCATTGTATAGTCCTGGCTGACCT  1126

seq1  GGAATTC  1157
      |||||||
seq2  GGAATTC  1133