BAC Information

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BAC

Clone NameB6Ng01-074A02
Chromosome7 (Build37)
Map Location 100,692,253 - 100,821,538
singlet/doubletdoublet
Overlap geneLOC666783
Upstream geneCcdc90b, Ankrd42, Pcf11, LOC676240, LOC100040007, 4632427E13Rik, Rab30, 4632434I11Rik, Prcp, A830059I20Rik, LOC100040298
Downstream geneEG638305, EG545982
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074A02.bB6Ng01-074A02.g
ACCDH890973DH890974
length1,092483
definitionDH890973|Mus musculus domesticus DNA, BAC clone: B6Ng01-074A02, 5' end.DH890974|Mus musculus domesticus DNA, BAC clone: B6Ng01-074A02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,820,443 - 100,821,538)(100,692,253 - 100,692,741)
sequence
gaattcccaatctattcttctataccatccaagtagtaatgtccatttaa
atagcaggtagaaatcatcaatttgagtgaaagtgagacattcggaatgt
tgtacctccattttaactttatctagctttcatggagtcatttgcatatt
ttaaaatgtatagttatgtatataagaaaaaagccacataaaaatgagga
agtctaggctgagagtgttgctgtagagggccttcctgtcagtcattcag
aaaaccctgaggtacatcccaaagactgtataaaactaggcatgctggct
taagcctgtggtgtgagcacttggtacatggagacaaaggcataagaagt
taacagcacattggctaccaattaagttcccagccagtctgcactacatg
acacctggctcatatcaacaaacagaagcgataacctcagaattatttgg
ttacaacctgattgtccttgtaatgattaagaaagagagatattaatata
tcttccatttagttgaaatagaatacagctcagaaaagacaaaattattt
ttttagggtcacacagtcaatttctggaaacaactttatgagctcctaag
ctgtaatactgatttttttttttagcaatatgtcctatcatgcctattaa
ttcattgtttaatataagattatttacccttttattcctatgttttaaat
atgaacttctaaagatacatatttagctatattattaggcatgagatact
ttttttaaatttttaatttcaagggtaaggccagaaatcttcaagcttac
ataacagttgttagccttaaaatccacaatgacttccaaattaacttacc
aaatgagttcagcaacaaacgccccaatggtcataacattaatataatca
taaaagtacatttacattattagaagctttgtaaatgctgtaattaagat
attcagtggacatctgtcttccctgtccccaagggttcccaagaaatctc
taaccacacttatttctgaaccgtcatctgcctggaaatggaggagcatc
tgttagctatattcgcaatgtaaatgacaaaggagtttaaac
attaacttgtacttgctttcagttctgtaagtctcagcagcatctgtgta
aatcacagatgattacagtactgctaccaagtttttctggcacaatctca
gacataatgaacatgaaggtattttaaaataaaaataaaagaggaaccat
tactgaaaattaggctgtttttttctatgttgcttttattgaatctgtat
tccacagaataattgtcagtgtttcttgttctgaaatatttttgttaaga
aaaagcatacattgtcatatacaattaaaataggggtgatattccttacg
attacattatcccaacacctttctttacatatagctatttgcttttatct
atctaattcctagtagaaattaatatattctcttttcttcctgaatatac
agaatccggaaccttcaaagttaatctatgtataatgaatgaacatggct
tgctttcttccttccttccttccttccttcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_100820443_100821538
seq2: B6Ng01-074A02.b_41_1132 (reverse)

seq1  GTTTAAAACTCTTTTGTCATTTAACATTGCAAATATA-CTAACAGATGGC  49
      |||| |||||| |||||||||| ||||||| |||||| ||||||||| ||
seq2  GTTT-AAACTCCTTTGTCATTT-ACATTGCGAATATAGCTAACAGAT-GC  47

seq1  TTCTCCCATCTCCAGGCAGATGACGGTTCAGAAATAAGTGCTGTTTAGAG  99
      | || |||| |||||||||||||||||||||||||||||| || ||||||
seq2  TCCT-CCATTTCCAGGCAGATGACGGTTCAGAAATAAGTG-TGGTTAGAG  95

seq1  ATTTCTTGGGAACACTTGGGGACAGGGAAGACAGCTGT-CACTGAATATC  148
      ||||||||||||| |||||||||||||||||||| ||| |||||||||||
seq2  ATTTCTTGGGAACCCTTGGGGACAGGGAAGACAGATGTCCACTGAATATC  145

seq1  TTAATTACAGCATTTACAAAGC-TCTAATTAATGTAATGGTACTTTTATG  197
      |||||||||||||||||||||| ||||| ||||||||  |||||||||||
seq2  TTAATTACAGCATTTACAAAGCTTCTAA-TAATGTAAATGTACTTTTATG  194

seq1  ATTATATTAATGTTATGACCATTGGGGCGTTTGTTGCTGAACTCATTTGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTAATGTTATGACCATTGGGGCGTTTGTTGCTGAACTCATTTGG  244

seq1  TAAGATAATTTGGAAGTCATTGTGGATTTTAAGGCTAACAACTGTTATGT  297
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTAATTTGGAAGTCATTGTGGATTTTAAGGCTAACAACTGTTATGT  294

seq1  AAGCTTGAAGATTTCTGGCCTTACCCTTGAAATTAAAAATTTAAAAAAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGAAGATTTCTGGCCTTACCCTTGAAATTAAAAATTTAAAAAAAG  344

seq1  TATCTCATGCCTAATAATATAGCTAAATATGTATCTTTAGAAGTTCATAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCATGCCTAATAATATAGCTAAATATGTATCTTTAGAAGTTCATAT  394

seq1  TTAAAACATAGGAATAAAAGGGTAAATAATCTTATATTAAACAATGAATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACATAGGAATAAAAGGGTAAATAATCTTATATTAAACAATGAATT  444

seq1  AATAGGCATGATAGGACATATTGCTAAAAAAAAAAATCAGTATTACAGCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGCATGATAGGACATATTGCTAAAAAAAAAAATCAGTATTACAGCT  494

seq1  TAGGAGCTCATAAAGTTGTTTCCAGAAATTGACTGTGTGACCCTAAAAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGCTCATAAAGTTGTTTCCAGAAATTGACTGTGTGACCCTAAAAAA  544

seq1  ATAATTTTGTCTTTTCTGAGCTGTATTCTATTTCAACTAAATGGAAGATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTGTCTTTTCTGAGCTGTATTCTATTTCAACTAAATGGAAGATA  594

seq1  TATTAATATCTCTCTTTCTTAATCATTACAAGGACAATCAGGTTGTAACC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATATCTCTCTTTCTTAATCATTACAAGGACAATCAGGTTGTAACC  644

seq1  AAATAATTCTGAGGTTATCGCTTCTGTTTGTTGATATGAGCCAGGTGTCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTCTGAGGTTATCGCTTCTGTTTGTTGATATGAGCCAGGTGTCA  694

seq1  TGTAGTGCAGACTGGCTGGGAACTTAATTGGTAGCCAATGTGCTGTTAAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTGCAGACTGGCTGGGAACTTAATTGGTAGCCAATGTGCTGTTAAC  744

seq1  TTCTTATGCCTTTGTCTCCATGTACCAAGTGCTCACACCACAGGCTTAAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATGCCTTTGTCTCCATGTACCAAGTGCTCACACCACAGGCTTAAG  794

seq1  CCAGCATGCCTAGTTTTATACAGTCTTTGGGATGTACCTCAGGGTTTTCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATGCCTAGTTTTATACAGTCTTTGGGATGTACCTCAGGGTTTTCT  844

seq1  GAATGACTGACAGGAAGGCCCTCTACAGCAACACTCTCAGCCTAGACTTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGACTGACAGGAAGGCCCTCTACAGCAACACTCTCAGCCTAGACTTC  894

seq1  CTCATTTTTATGTGGCTTTTTTCTTATATACATAACTATACATTTTAAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTTTATGTGGCTTTTTTCTTATATACATAACTATACATTTTAAAA  944

seq1  TATGCAAATGACTCCATGAAAGCTAGATAAAGTTAAAATGGAGGTACAAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAAATGACTCCATGAAAGCTAGATAAAGTTAAAATGGAGGTACAAC  994

seq1  ATTCCGAATGTCTCACTTTCACTCAAATTGATGATTTCTACCTGCTATTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCGAATGTCTCACTTTCACTCAAATTGATGATTTCTACCTGCTATTT  1044

seq1  AAATGGACATTACTACTTTTATGGTATTTGAAGAATAGATTGGGAATTC  1096
      ||||||||||||||||||  |||||| | ||||||||||||||||||||
seq2  AAATGGACATTACTACTTGGATGGTA-TAGAAGAATAGATTGGGAATTC  1092

seq1: chr7_100692253_100692741
seq2: B6Ng01-074A02.g_69_557

seq1  GAATTCATTAACTTGTACTTGCTTTCAGTTCTGTAAGTCTCAGCAGCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAACTTGTACTTGCTTTCAGTTCTGTAAGTCTCAGCAGCATC  50

seq1  TGTGTAAATCACAGATGATTACAGTACTGCTACCAAGTTTTTCTGGCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAATCACAGATGATTACAGTACTGCTACCAAGTTTTTCTGGCACA  100

seq1  ATCTCAGACATAATGAACATGAAGGTATTTTAAAATAAAAATAAAAGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGACATAATGAACATGAAGGTATTTTAAAATAAAAATAAAAGAGG  150

seq1  AACCATTACTGAAAATTAGGCTGTTTTTTTCTATGTTGCTTTTATTGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTACTGAAAATTAGGCTGTTTTTTTCTATGTTGCTTTTATTGAAT  200

seq1  CTGTATTCCACAGAATAATTGTCAGTGTTTCTTGTTCTGAAATATTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTCCACAGAATAATTGTCAGTGTTTCTTGTTCTGAAATATTTTTG  250

seq1  TTAAGAAAAAGCATACATTGTCATATACAATTAAAATAGGGGTGATATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAAAAGCATACATTGTCATATACAATTAAAATAGGGGTGATATTC  300

seq1  CTTACGATTACATTATCCCAACACCTTTCTTTACATATAGCTATTTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACGATTACATTATCCCAACACCTTTCTTTACATATAGCTATTTGCTT  350

seq1  TTATCTATCTAATTCCTAGTAGAAATTAATATATTCTCTTTTCTTCCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTATCTAATTCCTAGTAGAAATTAATATATTCTCTTTTCTTCCTGA  400

seq1  ATATACAGAATCCGGAACCTTCAAAGTTAATCTATGTATAATGAATGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAGAATCCGGAACCTTCAAAGTTAATCTATGTATAATGAATGAAC  450

seq1  ATGGCTTGCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTT  489
      |||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTTGCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTT  489