BAC Information

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BAC

Clone NameB6Ng01-074A23
Chromosome7 (Build37)
Map Location 28,650,916 - 28,757,149
singlet/doubletdoublet
Overlap gene4732475C15Rik, Prkcz2, 1700049G17Rik, EG668175, LOC100043771, Zfp780b
Upstream geneEG233005, EG330491, Cyp2a12, LOC100043199, Cyp2f2, Gm1450, Egln2, Rab4b, Mia1, Snrpa, Itpkc, Adck4, Numbl, Ltbp4, Shkbp1, Spnb4, Blvrb, EG668045, Sertad3, Sertad1, Prx, Hipk4, Pld3, 2310022A10Rik, Akt2, Ttc9b, Map3k10, C030039L03Rik, Zfp60, LOC100043229, LOC100043233, 4933426I21Rik, Zfp59
Downstream geneC130069I09Rik, LOC100043772, Psmc4, LOC100043774, 9530053A07Rik, Fbl, Dyrk1b, Eid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik, Fbxo27, Fbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4, Lgals7, Capn12, Actn4, Eif3s12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074A23.bB6Ng01-074A23.g
ACCDH891013DH891014
length1,0141,093
definitionDH891013|Mus musculus domesticus DNA, BAC clone: B6Ng01-074A23, 5' end.DH891014|Mus musculus domesticus DNA, BAC clone: B6Ng01-074A23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,650,916 - 28,651,621)(28,756,054 - 28,757,149)
sequence
gaattctgtgtcttcgtggtcactgtagtcacggtgtgatggtggcgcct
ccctgcagcactggggaggtggcaaaggcagatcccttgggcttgctggc
aagtcagctccaggcaaatgagagaccctgactcacaaagcacagatgga
caagtcagggggacatctgagtgcacacagcacagccttctacctagctt
ggcagggagctatgatggttcctctttttgtcaacttgaccacatcggga
attaacttacaacccaagcagctgggtacgcctgggagaggctcagttaa
atcactcaatgttggaggacccactttttgtgtctttgtttgacttcctg
actgtagcttcccctccctcctctccatccaggccttcttcctgcctcca
cacttctcatccactcctcctccatttcccttcagaaaagaactggcctc
aattgacatcaaccagccatggaatatggcggttcagtaagcatggccac
ctcctctcctaggccagacaaggcaacccaggaagcggaatgggtcccaa
aggcaggcaacagagtcagagacagcccctgccccactgttaggagtcca
accagaagattaaaccatacaactgtaacatatgtgcagagggcctacgt
tggtcctatgcaggcttcctggttggtggtttagtctccatgagctcctg
tgagctcaagttggttgattctgtatgttttcttgtgctgtctggctccc
acaatccttccccctcctcttcctcaggattccccaagctctgcccagtg
tttggctgtaggtctctgtgtctgttcctatcagtttgctgtatgatgcc
tctttgatgtagcagaatatcaatagggatcatttcattcactttttttt
tctttctttctttttgttgttgttgccgccattccctgtttgggttctat
cttgagtctttggacttatccagcctctgggctcctggactttgggagaa
gtcttcaggagtgg
gaattcttacccaggttgctttttcttccttctctgaattcttttcctca
gcattattttggcttctagaagcttttaatccgtttttccaagataaggg
tcttgctatgcagggtaaatggtatggctcatttcctccatgctggcctc
acaaagcatgatccactgagcccagctgtatagatctttataataaatgt
gtatttttaaaatctacacaagcagggaatagtggcctttagtcccagcg
tttgggaggcagaggcaagcagatcatgtaaattcaaggccaggctgatg
taatatgttctctatatcctgggattattaaaagagacccagtcccaatg
aatgaatgaatgaatgaatgaaaatctacacaatgagtcatctctttctt
tcgtttaagtgggacgttgcatttccaagccagatctgatcgtcttacta
gagcaggagaaagagccctggatggctgtgaaggaagaaacagacaggcc
gagcccaggtgagtaagagtgaagtgattcattattggttgtgtgcgcac
acacgtgtgcaggtatcctaagaggccctagagagggtcagctccctggg
ctggagttataggggctgctgggtctctaacccagggcctcgggcagagc
tctcagagttcttgaccactgaaccaaagccaagacggtttcagcagcat
tgacagctgtaacgcagggaggggcaccaaatgtctgaattctgtgtctt
cgtggtcactgtagtcacggtgtgatggtggcgcctccctgcagcactgg
ggaggtggcaaaggcagatcccttgggcttgctggcaagtcagctccagg
caaatgagagaccctgactcacaaagcacagatggacaagccagggggac
atctgagtgcatataccacacagcccttctacctagcttggcagggagct
gtgatggtttttctagttggcaaattgactaggaactactaaaatccagc
atctgagtacacctatgagaggatttttgtaagtaaagtatttaaggtag
agacccaccttaatccacatctttgagaatgggaagaacccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_28650916_28651621
seq2: B6Ng01-074A23.b_41_746

seq1  GAATTCTGTGTCTTCGTGGTCACTGTAGTCACGGTGTGATGGTGGCGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTCTTCGTGGTCACTGTAGTCACGGTGTGATGGTGGCGCCT  50

seq1  CCCTGCAGCACTGGGGAGGTGGCAAAGGCAGATCCCTTGGGCTTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCAGCACTGGGGAGGTGGCAAAGGCAGATCCCTTGGGCTTGCTGGC  100

seq1  AAGTCAGCTCCAGGCAAATGAGAGACCCTGACTCACAAAGCACAGATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGCTCCAGGCAAATGAGAGACCCTGACTCACAAAGCACAGATGGA  150

seq1  CAAGTCAGGGGGACATCTGAGTGCACACAGCACAGCCTTCTACCTAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAGGGGGACATCTGAGTGCACACAGCACAGCCTTCTACCTAGCTT  200

seq1  GGCAGGGAGCTATGATGGTTCCTCTTTTTGTCAACTTGACCACATCGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGAGCTATGATGGTTCCTCTTTTTGTCAACTTGACCACATCGGGA  250

seq1  ATTAACTTACAACCCAAGCAGCTGGGTACGCCTGGGAGAGGCTCAGTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTTACAACCCAAGCAGCTGGGTACGCCTGGGAGAGGCTCAGTTAA  300

seq1  ATCACTCAATGTTGGAGGACCCACTTTTTGTGTCTTTGTTTGACTTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTCAATGTTGGAGGACCCACTTTTTGTGTCTTTGTTTGACTTCCTG  350

seq1  ACTGTAGCTTCCCCTCCCTCCTCTCCATCCAGGCCTTCTTCCTGCCTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGCTTCCCCTCCCTCCTCTCCATCCAGGCCTTCTTCCTGCCTCCA  400

seq1  CACTTCTCATCCACTCCTCCTCCATTTCCCTTCAGAAAAGAACTGGCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTCATCCACTCCTCCTCCATTTCCCTTCAGAAAAGAACTGGCCTC  450

seq1  AATTGACATCAACCAGCCATGGAATATGGCGGTTCAGTAAGCATGGCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGACATCAACCAGCCATGGAATATGGCGGTTCAGTAAGCATGGCCAC  500

seq1  CTCCTCTCCTAGGCCAGACAAGGCAACCCAGGAAGCGGAATGGGTCCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTCCTAGGCCAGACAAGGCAACCCAGGAAGCGGAATGGGTCCCAA  550

seq1  AGGCAGGCAACAGAGTCAGAGACAGCCCCTGCCCCACTGTTAGGAGTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGCAACAGAGTCAGAGACAGCCCCTGCCCCACTGTTAGGAGTCCA  600

seq1  ACCAGAAGATTAAACCATACAACTGTAACATATGTGCAGAGGGCCTACGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAGATTAAACCATACAACTGTAACATATGTGCAGAGGGCCTACGT  650

seq1  TGGTCCTATGCAGGCTTCCTGGTTGGTGGTTTAGTCTCCATGAGCTCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTATGCAGGCTTCCTGGTTGGTGGTTTAGTCTCCATGAGCTCCTG  700

seq1  TGAGCT  706
      ||||||
seq2  TGAGCT  706

seq1: chr7_28756054_28757149
seq2: B6Ng01-074A23.g_66_1158 (reverse)

seq1  GTGGG-TCTTCCCA-TCTCAAAAGATGTGGATTAAAGGTGGGTCTTCCTA  48
      ||||| |||||||| |||| ||||||||||||| |||||||||||  |||
seq2  GTGGGTTCTTCCCATTCTC-AAAGATGTGGATT-AAGGTGGGTCT--CTA  46

seq1  CTTTAAATACTTTACTTAACAAAAAT-CTCTCATAGGTGTACTCAGATGC  97
      | ||||||||||||||| |||||||| |||||||||||||||||||||||
seq2  CCTTAAATACTTTACTT-ACAAAAATCCTCTCATAGGTGTACTCAGATGC  95

seq1  TTGGATTTTAGTTAGTTCCTAGTCAATTTGCCAACTAAGAAAACCATCAC  147
       |||||||||| |||||||||||||||||||||||||  |||||||||||
seq2  -TGGATTTTAG-TAGTTCCTAGTCAATTTGCCAACTAGAAAAACCATCAC  143

seq1  AGCTCCCTGCCAAGCTAGGTAGAA-GGCTGTGTGGTATATGCACTCAGAT  196
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGCTCCCTGCCAAGCTAGGTAGAAGGGCTGTGTGGTATATGCACTCAGAT  193

seq1  GTCCCCCTGGCTTGTCCATCTGTGCTTTGTGAGTCAGGGTCTCTCATTTG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCCTGGCTTGTCCATCTGTGCTTTGTGAGTCAGGGTCTCTCATTTG  243

seq1  CCTGGAGCTGACTTGCCAGCAAGCCCAAGGGATCTGCCTTTGCCACCTCC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGCTGACTTGCCAGCAAGCCCAAGGGATCTGCCTTTGCCACCTCC  293

seq1  CCAGTGCTGCAGGGAGGCGCCACCATCACACCGTGACTACAGTGACCACG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGCTGCAGGGAGGCGCCACCATCACACCGTGACTACAGTGACCACG  343

seq1  AAGACACAGAATTCAGACATTTGGTGCCCCTCCCTGCGTTACAGCTGTCA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACACAGAATTCAGACATTTGGTGCCCCTCCCTGCGTTACAGCTGTCA  393

seq1  ATGCTGCTGAAACCGTCTTGGCTTTGGTTCAGTGGTCAAGAACTCTGAGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGCTGAAACCGTCTTGGCTTTGGTTCAGTGGTCAAGAACTCTGAGA  443

seq1  GCTCTGCCCGAGGCCCTGGGTTAGAGACCCAGCAGCCCCTATAACTCCAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCCCGAGGCCCTGGGTTAGAGACCCAGCAGCCCCTATAACTCCAG  493

seq1  CCCAGGGAGCTGACCCTCTCTAGGGCCTCTTAGGATACCTGCACACGTGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGAGCTGACCCTCTCTAGGGCCTCTTAGGATACCTGCACACGTGT  543

seq1  GTGCGCACACAACCAATAATGAATCACTTCACTCTTACTCACCTGGGCTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGCACACAACCAATAATGAATCACTTCACTCTTACTCACCTGGGCTC  593

seq1  GGCCTGTCTGTTTCTTCCTTCACAGCCATCCAGGGCTCTTTCTCCTGCTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTCTGTTTCTTCCTTCACAGCCATCCAGGGCTCTTTCTCCTGCTC  643

seq1  TAGTAAGACGATCAGATCTGGCTTGGAAATGCAACGTCCCACTTAAACGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGACGATCAGATCTGGCTTGGAAATGCAACGTCCCACTTAAACGA  693

seq1  AAGAAAGAGATGACTCATTGTGTAGATTTTCATTCATTCATTCATTCATT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAGATGACTCATTGTGTAGATTTTCATTCATTCATTCATTCATT  743

seq1  CATTGGGACTGGGTCTCTTTTAATAATCCCAGGATATAGAGAACATATTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGGACTGGGTCTCTTTTAATAATCCCAGGATATAGAGAACATATTA  793

seq1  CATCAGCCTGGCCTTGAATTTACATGATCTGCTTGCCTCTGCCTCCCAAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGCCTGGCCTTGAATTTACATGATCTGCTTGCCTCTGCCTCCCAAA  843

seq1  CGCTGGGACTAAAGGCCACTATTCCCTGCTTGTGTAGATTTTAAAAATAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGGGACTAAAGGCCACTATTCCCTGCTTGTGTAGATTTTAAAAATAC  893

seq1  ACATTTATTATAAAGATCTATACAGCTGGGCTCAGTGGATCATGCTTTGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTATTATAAAGATCTATACAGCTGGGCTCAGTGGATCATGCTTTGT  943

seq1  GAGGCCAGCATGGAGGAAATGAGCCATACCATTTACCCTGCATAGCAAGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCAGCATGGAGGAAATGAGCCATACCATTTACCCTGCATAGCAAGA  993

seq1  CCCTTATCTTGGAAAAACGGATTAAAAGCTTCTAGAAGCCAAAATAATGC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTATCTTGGAAAAACGGATTAAAAGCTTCTAGAAGCCAAAATAATGC  1043

seq1  TGAGGAAAAGAATTCAGAGAAGGAAGAAAAAGCAACCTGGGTAAGAATTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAAAGAATTCAGAGAAGGAAGAAAAAGCAACCTGGGTAAGAATTC  1093